EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000014766 (Gene tree)
Gene ID: 100391086
Gene Symbol: CHD3
Alias: Mi-2a|Mi2-ALPHA|ZFH
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 26243 bases
Position: chrNTIC01034389.1:68580922-68607164
Accession: 1918
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000027281	ResIII	PF04851.15	2.6e-08	1	1
ENSCJAP00000027301	ResIII	PF04851.15	2.7e-08	1	1
ENSCJAP00000027313	ResIII	PF04851.15	2.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000028875	CHD3-201	6171	-	ENSCJAP00000027313	2056 (aa)	-	F7E9J1
ENSCJAT00000028839	CHD3-203	5901	-	ENSCJAP00000027281	1966 (aa)	-	F7FEN0
ENSCJAT00000028863	CHD3-202	6003	-	ENSCJAP00000027301	2000 (aa)	-	F7EA07

Gene Model

Click here to download ENSCJAG00000014766's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000014766's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000014766	CHD3	89	70.796	ENSCJAG00000008114	-	95	70.053
ENSCJAG00000014766	CHD3	94	68.918	ENSCJAG00000000101	CHD5	97	68.941

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000014766	CHD3	100	99.466	ENSG00000170004	CHD3	100	99.466	Homo_sapiens
ENSCJAG00000014766	CHD3	84	76.358	ENSAPOG00000005614	chd3	94	80.208	Acanthochromis_polyacanthus
ENSCJAG00000014766	CHD3	68	97.214	ENSAMEG00000003025	-	100	97.214	Ailuropoda_melanoleuca
ENSCJAG00000014766	CHD3	81	83.516	ENSACIG00000019671	chd3	99	83.516	Amphilophus_citrinellus
ENSCJAG00000014766	CHD3	91	81.100	ENSAOCG00000023784	chd3	97	81.603	Amphiprion_ocellaris
ENSCJAG00000014766	CHD3	91	80.756	ENSAPEG00000006341	chd3	95	77.664	Amphiprion_percula
ENSCJAG00000014766	CHD3	91	81.315	ENSATEG00000000848	chd3	99	74.304	Anabas_testudineus
ENSCJAG00000014766	CHD3	96	85.296	ENSACAG00000004276	CHD3	96	84.771	Anolis_carolinensis
ENSCJAG00000014766	CHD3	100	96.800	ENSANAG00000034323	CHD3	99	99.574	Aotus_nancymaae
ENSCJAG00000014766	CHD3	91	78.816	ENSACLG00000009222	chd3	99	74.804	Astatotilapia_calliptera
ENSCJAG00000014766	CHD3	100	98.010	ENSBTAG00000014377	CHD3	100	98.010	Bos_taurus
ENSCJAG00000014766	CHD3	99	97.799	ENSCAFG00000016859	CHD3	99	97.799	Canis_familiaris
ENSCJAG00000014766	CHD3	94	98.242	ENSCAFG00020007422	CHD3	100	98.363	Canis_lupus_dingo
ENSCJAG00000014766	CHD3	99	98.383	ENSCHIG00000016737	CHD3	100	98.383	Capra_hircus
ENSCJAG00000014766	CHD3	99	98.728	ENSTSYG00000035658	CHD3	99	98.728	Carlito_syrichta
ENSCJAG00000014766	CHD3	99	94.634	ENSCAPG00000014864	CHD3	99	95.005	Cavia_aperea
ENSCJAG00000014766	CHD3	99	97.141	ENSCPOG00000022653	CHD3	99	97.528	Cavia_porcellus
ENSCJAG00000014766	CHD3	100	99.450	ENSCCAG00000034792	CHD3	100	99.450	Cebus_capucinus
ENSCJAG00000014766	CHD3	100	99.271	ENSCATG00000041717	CHD3	100	99.271	Cercocebus_atys
ENSCJAG00000014766	CHD3	98	98.551	ENSCLAG00000010523	CHD3	100	98.551	Chinchilla_lanigera
ENSCJAG00000014766	CHD3	98	99.187	ENSCSAG00000011122	CHD3	100	99.187	Chlorocebus_sabaeus
ENSCJAG00000014766	CHD3	89	84.528	ENSCPBG00000011966	CHD3	99	87.627	Chrysemys_picta_bellii
ENSCJAG00000014766	CHD3	99	99.185	ENSCANG00000037641	CHD3	99	99.185	Colobus_angolensis_palliatus
ENSCJAG00000014766	CHD3	98	97.673	ENSCGRG00001011306	Chd3	100	97.673	Cricetulus_griseus_chok1gshd
ENSCJAG00000014766	CHD3	93	97.794	ENSCGRG00000007878	Chd3	99	97.794	Cricetulus_griseus_crigri
ENSCJAG00000014766	CHD3	91	79.605	ENSCSEG00000004489	chd3	99	76.090	Cynoglossus_semilaevis
ENSCJAG00000014766	CHD3	86	82.072	ENSCVAG00000007293	chd3	95	82.996	Cyprinodon_variegatus
ENSCJAG00000014766	CHD3	93	77.416	ENSDARG00000021405	chd3	99	76.461	Danio_rerio
ENSCJAG00000014766	CHD3	98	83.713	ENSDNOG00000047846	CHD3	91	92.755	Dasypus_novemcinctus
ENSCJAG00000014766	CHD3	98	97.981	ENSDORG00000010713	Chd3	100	97.981	Dipodomys_ordii
ENSCJAG00000014766	CHD3	96	92.060	ENSETEG00000017733	CHD3	100	92.060	Echinops_telfairi
ENSCJAG00000014766	CHD3	53	77.737	ENSEBUG00000008310	chd3	99	70.456	Eptatretus_burgeri
ENSCJAG00000014766	CHD3	92	98.691	ENSEASG00005019360	CHD3	100	98.691	Equus_asinus_asinus
ENSCJAG00000014766	CHD3	92	98.745	ENSECAG00000010051	CHD3	100	98.745	Equus_caballus
ENSCJAG00000014766	CHD3	91	96.610	ENSEEUG00000015205	CHD3	92	98.077	Erinaceus_europaeus
ENSCJAG00000014766	CHD3	78	90.476	ENSELUG00000019499	chd3	99	90.476	Esox_lucius
ENSCJAG00000014766	CHD3	100	98.058	ENSFCAG00000009629	CHD3	100	98.058	Felis_catus
ENSCJAG00000014766	CHD3	99	95.260	ENSFDAG00000008220	CHD3	99	96.138	Fukomys_damarensis
ENSCJAG00000014766	CHD3	89	80.426	ENSGMOG00000013599	chd3	91	80.812	Gadus_morhua
ENSCJAG00000014766	CHD3	59	74.915	ENSGAFG00000004055	chd3	99	76.838	Gambusia_affinis
ENSCJAG00000014766	CHD3	97	70.791	ENSGACG00000019275	chd3	100	70.896	Gasterosteus_aculeatus
ENSCJAG00000014766	CHD3	74	87.101	ENSGAGG00000013164	CHD3	98	87.101	Gopherus_agassizii
ENSCJAG00000014766	CHD3	99	99.299	ENSGGOG00000013496	CHD3	99	99.299	Gorilla_gorilla
ENSCJAG00000014766	CHD3	99	98.390	ENSHGLG00000012017	CHD3	100	98.390	Heterocephalus_glaber_female
ENSCJAG00000014766	CHD3	88	91.594	ENSHGLG00100013902	CHD3	99	91.594	Heterocephalus_glaber_male
ENSCJAG00000014766	CHD3	93	72.769	ENSHCOG00000010170	chd3	96	73.306	Hippocampus_comes
ENSCJAG00000014766	CHD3	84	80.424	ENSIPUG00000003271	chd3	96	80.848	Ictalurus_punctatus
ENSCJAG00000014766	CHD3	99	98.299	ENSSTOG00000025907	CHD3	100	98.913	Ictidomys_tridecemlineatus
ENSCJAG00000014766	CHD3	99	96.747	ENSJJAG00000017633	Chd3	100	97.724	Jaculus_jaculus
ENSCJAG00000014766	CHD3	86	90.047	ENSKMAG00000019292	chd3	97	75.957	Kryptolebias_marmoratus
ENSCJAG00000014766	CHD3	95	70.601	ENSLBEG00000028485	chd3	92	81.008	Labrus_bergylta
ENSCJAG00000014766	CHD3	95	75.051	ENSLACG00000008031	CHD3	99	74.374	Latimeria_chalumnae
ENSCJAG00000014766	CHD3	96	77.588	ENSLOCG00000013965	chd3	97	77.347	Lepisosteus_oculatus
ENSCJAG00000014766	CHD3	94	94.383	ENSLAFG00000000572	CHD3	100	94.383	Loxodonta_africana
ENSCJAG00000014766	CHD3	99	99.236	ENSMFAG00000020113	CHD3	99	99.236	Macaca_fascicularis
ENSCJAG00000014766	CHD3	99	96.797	ENSMMUG00000022221	CHD3	99	96.797	Macaca_mulatta
ENSCJAG00000014766	CHD3	99	99.236	ENSMNEG00000001728	CHD3	99	99.236	Macaca_nemestrina
ENSCJAG00000014766	CHD3	99	99.287	ENSMLEG00000032249	CHD3	99	99.287	Mandrillus_leucophaeus
ENSCJAG00000014766	CHD3	84	76.748	ENSMAMG00000000564	chd3	99	77.406	Mastacembelus_armatus
ENSCJAG00000014766	CHD3	99	96.878	ENSMAUG00000013873	Chd3	97	96.878	Mesocricetus_auratus
ENSCJAG00000014766	CHD3	100	98.834	ENSMICG00000008741	CHD3	100	98.834	Microcebus_murinus
ENSCJAG00000014766	CHD3	98	97.719	ENSMOCG00000004848	Chd3	100	97.719	Microtus_ochrogaster
ENSCJAG00000014766	CHD3	94	74.599	ENSMMOG00000012699	chd3	99	74.041	Mola_mola
ENSCJAG00000014766	CHD3	91	94.556	ENSMODG00000007509	CHD3	100	94.556	Monodelphis_domestica
ENSCJAG00000014766	CHD3	99	97.080	MGP_CAROLIEiJ_G0016564	Chd3	100	97.508	Mus_caroli
ENSCJAG00000014766	CHD3	100	97.136	ENSMUSG00000018474	Chd3	100	97.136	Mus_musculus
ENSCJAG00000014766	CHD3	99	97.322	MGP_PahariEiJ_G0017695	Chd3	100	97.719	Mus_pahari
ENSCJAG00000014766	CHD3	100	97.087	MGP_SPRETEiJ_G0017400	Chd3	100	97.614	Mus_spretus
ENSCJAG00000014766	CHD3	86	98.133	ENSMPUG00000008861	CHD3	100	98.133	Mustela_putorius_furo
ENSCJAG00000014766	CHD3	99	96.950	ENSMLUG00000014643	-	99	96.950	Myotis_lucifugus
ENSCJAG00000014766	CHD3	99	97.380	ENSNGAG00000000773	Chd3	99	97.380	Nannospalax_galili
ENSCJAG00000014766	CHD3	85	75.396	ENSNBRG00000000636	chd3	98	76.016	Neolamprologus_brichardi
ENSCJAG00000014766	CHD3	99	95.560	ENSNLEG00000009770	CHD3	100	96.314	Nomascus_leucogenys
ENSCJAG00000014766	CHD3	86	91.078	ENSMEUG00000005852	CHD3	87	91.209	Notamacropus_eugenii
ENSCJAG00000014766	CHD3	94	96.795	ENSOPRG00000011069	CHD3	100	96.795	Ochotona_princeps
ENSCJAG00000014766	CHD3	99	97.588	ENSODEG00000017785	CHD3	100	97.588	Octodon_degus
ENSCJAG00000014766	CHD3	94	75.052	ENSONIG00000009292	chd3	100	74.948	Oreochromis_niloticus
ENSCJAG00000014766	CHD3	98	93.791	ENSOCUG00000029299	CHD3	100	93.693	Oryctolagus_cuniculus
ENSCJAG00000014766	CHD3	81	72.096	ENSORLG00000007107	chd3	93	71.973	Oryzias_latipes
ENSCJAG00000014766	CHD3	57	72.840	ENSORLG00020008387	chd3	95	73.698	Oryzias_latipes_hni
ENSCJAG00000014766	CHD3	85	77.579	ENSOMEG00000013691	chd3	99	78.380	Oryzias_melastigma
ENSCJAG00000014766	CHD3	98	98.376	ENSOGAG00000003216	CHD3	100	98.376	Otolemur_garnettii
ENSCJAG00000014766	CHD3	99	95.604	ENSOARG00000017855	CHD3	99	96.093	Ovis_aries
ENSCJAG00000014766	CHD3	99	97.088	ENSPPAG00000032886	CHD3	99	97.088	Pan_paniscus
ENSCJAG00000014766	CHD3	99	97.649	ENSPPRG00000000626	CHD3	100	98.025	Panthera_pardus
ENSCJAG00000014766	CHD3	100	99.563	ENSPTRG00000008714	CHD3	100	99.563	Pan_troglodytes
ENSCJAG00000014766	CHD3	99	99.199	ENSPANG00000023938	CHD3	99	99.199	Papio_anubis
ENSCJAG00000014766	CHD3	93	80.553	ENSPKIG00000006305	chd3	99	79.409	Paramormyrops_kingsleyae
ENSCJAG00000014766	CHD3	55	90.511	ENSPSIG00000010177	CHD3	98	90.785	Pelodiscus_sinensis
ENSCJAG00000014766	CHD3	99	96.873	ENSPEMG00000014262	Chd3	100	96.873	Peromyscus_maniculatus_bairdii
ENSCJAG00000014766	CHD3	98	93.988	ENSPCIG00000005442	CHD3	99	94.193	Phascolarctos_cinereus
ENSCJAG00000014766	CHD3	91	80.272	ENSPFOG00000012464	chd3	87	79.798	Poecilia_formosa
ENSCJAG00000014766	CHD3	86	83.534	ENSPLAG00000002887	chd3	96	83.534	Poecilia_latipinna
ENSCJAG00000014766	CHD3	53	81.374	ENSPMEG00000016725	chd3	94	73.247	Poecilia_mexicana
ENSCJAG00000014766	CHD3	89	84.502	ENSPREG00000011044	chd3	99	77.942	Poecilia_reticulata
ENSCJAG00000014766	CHD3	99	94.494	ENSPPYG00000007940	CHD3	98	96.475	Pongo_abelii
ENSCJAG00000014766	CHD3	95	97.761	ENSPCAG00000004350	CHD3	96	97.761	Procavia_capensis
ENSCJAG00000014766	CHD3	99	98.832	ENSPCOG00000020952	CHD3	100	98.832	Propithecus_coquereli
ENSCJAG00000014766	CHD3	85	97.412	ENSPVAG00000016344	CHD3	87	97.412	Pteropus_vampyrus
ENSCJAG00000014766	CHD3	94	78.585	ENSPNAG00000020393	chd3	98	81.540	Pygocentrus_nattereri
ENSCJAG00000014766	CHD3	92	96.950	ENSRNOG00000009722	Chd3	100	96.950	Rattus_norvegicus
ENSCJAG00000014766	CHD3	99	96.045	ENSRBIG00000033562	CHD3	99	96.045	Rhinopithecus_bieti
ENSCJAG00000014766	CHD3	99	99.287	ENSRROG00000029554	CHD3	99	99.287	Rhinopithecus_roxellana
ENSCJAG00000014766	CHD3	100	99.550	ENSSBOG00000020719	CHD3	100	99.550	Saimiri_boliviensis_boliviensis
ENSCJAG00000014766	CHD3	98	94.912	ENSSHAG00000014412	CHD3	100	94.912	Sarcophilus_harrisii
ENSCJAG00000014766	CHD3	86	80.727	ENSSFOG00015023123	chd3	98	75.444	Scleropages_formosus
ENSCJAG00000014766	CHD3	77	91.304	ENSSMAG00000006451	chd3	99	77.177	Scophthalmus_maximus
ENSCJAG00000014766	CHD3	56	72.480	ENSSDUG00000005792	chd3	95	73.443	Seriola_dumerili
ENSCJAG00000014766	CHD3	91	80.756	ENSSPAG00000013694	chd3	98	81.053	Stegastes_partitus
ENSCJAG00000014766	CHD3	99	98.276	ENSSSCG00000021363	CHD3	100	98.310	Sus_scrofa
ENSCJAG00000014766	CHD3	76	74.742	ENSTRUG00000014990	chd3	93	74.037	Takifugu_rubripes
ENSCJAG00000014766	CHD3	96	73.589	ENSTNIG00000012998	chd3	99	73.151	Tetraodon_nigroviridis
ENSCJAG00000014766	CHD3	64	100.000	ENSTBEG00000011454	-	71	100.000	Tupaia_belangeri
ENSCJAG00000014766	CHD3	97	99.383	ENSTTRG00000010295	CHD3	97	99.383	Tursiops_truncatus
ENSCJAG00000014766	CHD3	92	97.224	ENSUAMG00000005475	CHD3	99	97.224	Ursus_americanus
ENSCJAG00000014766	CHD3	56	100.000	ENSVPAG00000010794	-	62	100.000	Vicugna_pacos
ENSCJAG00000014766	CHD3	94	98.356	ENSVVUG00000028011	CHD3	99	98.242	Vulpes_vulpes
ENSCJAG00000014766	CHD3	97	72.640	ENSXETG00000012991	chd3	97	71.287	Xenopus_tropicalis
ENSCJAG00000014766	CHD3	52	82.864	ENSXCOG00000000809	chd3	96	83.089	Xiphophorus_couchianus
ENSCJAG00000014766	CHD3	81	82.967	ENSXMAG00000016035	chd3	99	82.967	Xiphophorus_maculatus