EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000015131 (Gene tree)
Gene ID: 100385038
Gene Symbol: SHQ1
Alias: -
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 101371 bases
Position: chrNTIC01006668.1:47067445-47168815
Accession: 25543
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000043408	SHQ1	PF04925.15	1.6e-68	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000059435	SHQ1-201	2070	-	ENSCJAP00000043408	576 (aa)	-	F7IHA7
ENSCJAT00000077900	SHQ1-202	192	-	ENSCJAP00000063181	63 (aa)	-	A0A2R8PGA8

Gene Model

Click here to download ENSCJAG00000015131's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000015131's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000015131	SHQ1	100	93.588	ENSG00000144736	SHQ1	100	94.545	Homo_sapiens
ENSCJAG00000015131	SHQ1	75	60.870	ENSAPOG00000000397	shq1	93	51.973	Acanthochromis_polyacanthus
ENSCJAG00000015131	SHQ1	100	81.347	ENSAMEG00000015140	SHQ1	100	80.484	Ailuropoda_melanoleuca
ENSCJAG00000015131	SHQ1	75	61.663	ENSACIG00000021249	shq1	67	61.893	Amphilophus_citrinellus
ENSCJAG00000015131	SHQ1	75	62.014	ENSAOCG00000023311	shq1	70	62.014	Amphiprion_ocellaris
ENSCJAG00000015131	SHQ1	75	61.327	ENSAPEG00000021686	shq1	70	61.327	Amphiprion_percula
ENSCJAG00000015131	SHQ1	75	61.556	ENSATEG00000008475	shq1	90	51.807	Anabas_testudineus
ENSCJAG00000015131	SHQ1	88	64.314	ENSAPLG00000013926	SHQ1	100	64.314	Anas_platyrhynchos
ENSCJAG00000015131	SHQ1	99	61.512	ENSACAG00000014809	SHQ1	86	62.543	Anolis_carolinensis
ENSCJAG00000015131	SHQ1	99	72.056	ENSANAG00000030500	-	99	72.056	Aotus_nancymaae
ENSCJAG00000015131	SHQ1	100	95.312	ENSANAG00000029241	SHQ1	100	95.312	Aotus_nancymaae
ENSCJAG00000015131	SHQ1	76	60.090	ENSACLG00000023077	shq1	69	56.951	Astatotilapia_calliptera
ENSCJAG00000015131	SHQ1	74	55.220	ENSAMXG00000043822	shq1	90	49.536	Astyanax_mexicanus
ENSCJAG00000015131	SHQ1	100	78.830	ENSBTAG00000005436	SHQ1	100	79.690	Bos_taurus
ENSCJAG00000015131	SHQ1	75	33.636	WBGene00021655	Y48A5A.1	92	34.752	Caenorhabditis_elegans
ENSCJAG00000015131	SHQ1	100	80.656	ENSCAFG00000006434	SHQ1	99	81.347	Canis_familiaris
ENSCJAG00000015131	SHQ1	100	80.484	ENSCAFG00020016743	SHQ1	99	81.174	Canis_lupus_dingo
ENSCJAG00000015131	SHQ1	100	78.485	ENSCHIG00000012271	SHQ1	91	79.346	Capra_hircus
ENSCJAG00000015131	SHQ1	99	80.560	ENSTSYG00000014439	SHQ1	99	81.086	Carlito_syrichta
ENSCJAG00000015131	SHQ1	91	66.286	ENSCAPG00000009343	SHQ1	97	90.260	Cavia_aperea
ENSCJAG00000015131	SHQ1	99	74.830	ENSCPOG00000011443	SHQ1	99	75.000	Cavia_porcellus
ENSCJAG00000015131	SHQ1	100	85.069	ENSCCAG00000027080	SHQ1	100	84.028	Cebus_capucinus
ENSCJAG00000015131	SHQ1	99	72.426	ENSCCAG00000036087	-	99	72.426	Cebus_capucinus
ENSCJAG00000015131	SHQ1	100	92.548	ENSCATG00000041238	SHQ1	100	92.548	Cercocebus_atys
ENSCJAG00000015131	SHQ1	98	75.174	ENSCLAG00000004206	SHQ1	98	75.567	Chinchilla_lanigera
ENSCJAG00000015131	SHQ1	85	92.213	ENSCSAG00000011514	SHQ1	100	92.213	Chlorocebus_sabaeus
ENSCJAG00000015131	SHQ1	59	72.515	ENSCHOG00000003273	-	99	72.515	Choloepus_hoffmanni
ENSCJAG00000015131	SHQ1	96	65.827	ENSCPBG00000006441	SHQ1	91	67.086	Chrysemys_picta_bellii
ENSCJAG00000015131	SHQ1	69	42.356	ENSCING00000008013	-	85	42.356	Ciona_intestinalis
ENSCJAG00000015131	SHQ1	68	42.317	ENSCSAVG00000002332	-	88	42.317	Ciona_savignyi
ENSCJAG00000015131	SHQ1	99	92.644	ENSCANG00000039295	SHQ1	99	92.644	Colobus_angolensis_palliatus
ENSCJAG00000015131	SHQ1	100	74.527	ENSCGRG00001012583	Shq1	100	82.377	Cricetulus_griseus_chok1gshd
ENSCJAG00000015131	SHQ1	100	74.527	ENSCGRG00000009849	Shq1	100	82.377	Cricetulus_griseus_crigri
ENSCJAG00000015131	SHQ1	72	61.244	ENSCSEG00000007829	shq1	90	52.324	Cynoglossus_semilaevis
ENSCJAG00000015131	SHQ1	75	60.870	ENSCVAG00000020049	shq1	70	61.298	Cyprinodon_variegatus
ENSCJAG00000015131	SHQ1	75	57.931	ENSDARG00000058522	shq1	69	58.696	Danio_rerio
ENSCJAG00000015131	SHQ1	100	80.690	ENSDNOG00000033937	SHQ1	100	81.207	Dasypus_novemcinctus
ENSCJAG00000015131	SHQ1	100	67.414	ENSETEG00000005766	SHQ1	100	65.862	Echinops_telfairi
ENSCJAG00000015131	SHQ1	65	48.000	ENSEBUG00000005445	shq1	72	49.691	Eptatretus_burgeri
ENSCJAG00000015131	SHQ1	100	82.383	ENSEASG00005002237	SHQ1	100	83.765	Equus_asinus_asinus
ENSCJAG00000015131	SHQ1	98	83.156	ENSECAG00000015673	SHQ1	95	84.574	Equus_caballus
ENSCJAG00000015131	SHQ1	99	78.163	ENSEEUG00000010568	SHQ1	99	78.510	Erinaceus_europaeus
ENSCJAG00000015131	SHQ1	72	60.096	ENSELUG00000003476	shq1	90	51.937	Esox_lucius
ENSCJAG00000015131	SHQ1	100	81.002	ENSFCAG00000012781	SHQ1	100	79.620	Felis_catus
ENSCJAG00000015131	SHQ1	99	63.085	ENSFALG00000013428	SHQ1	94	63.495	Ficedula_albicollis
ENSCJAG00000015131	SHQ1	99	73.445	ENSFDAG00000005595	SHQ1	91	72.437	Fukomys_damarensis
ENSCJAG00000015131	SHQ1	75	61.644	ENSFHEG00000017552	shq1	94	51.973	Fundulus_heteroclitus
ENSCJAG00000015131	SHQ1	68	57.789	ENSGMOG00000007350	shq1	100	58.000	Gadus_morhua
ENSCJAG00000015131	SHQ1	99	62.872	ENSGALG00000007798	SHQ1	93	61.646	Gallus_gallus
ENSCJAG00000015131	SHQ1	68	59.194	ENSGACG00000011797	shq1	100	59.950	Gasterosteus_aculeatus
ENSCJAG00000015131	SHQ1	100	93.761	ENSGGOG00000034818	SHQ1	100	93.761	Gorilla_gorilla
ENSCJAG00000015131	SHQ1	76	59.865	ENSHBUG00000010857	shq1	68	60.671	Haplochromis_burtoni
ENSCJAG00000015131	SHQ1	98	74.150	ENSHGLG00000003637	SHQ1	90	74.660	Heterocephalus_glaber_female
ENSCJAG00000015131	SHQ1	98	74.403	ENSHGLG00100011957	SHQ1	90	74.915	Heterocephalus_glaber_male
ENSCJAG00000015131	SHQ1	94	51.277	ENSHCOG00000010799	shq1	74	58.108	Hippocampus_comes
ENSCJAG00000015131	SHQ1	75	57.763	ENSIPUG00000001247	shq1	70	58.273	Ictalurus_punctatus
ENSCJAG00000015131	SHQ1	98	72.566	ENSSTOG00000010043	SHQ1	99	73.145	Ictidomys_tridecemlineatus
ENSCJAG00000015131	SHQ1	100	73.921	ENSJJAG00000017611	Shq1	100	80.738	Jaculus_jaculus
ENSCJAG00000015131	SHQ1	96	52.827	ENSKMAG00000004457	shq1	91	52.076	Kryptolebias_marmoratus
ENSCJAG00000015131	SHQ1	98	59.441	ENSLACG00000014243	SHQ1	86	57.976	Latimeria_chalumnae
ENSCJAG00000015131	SHQ1	97	56.338	ENSLOCG00000009970	shq1	97	56.567	Lepisosteus_oculatus
ENSCJAG00000015131	SHQ1	99	70.191	ENSMFAG00000037396	-	99	70.191	Macaca_fascicularis
ENSCJAG00000015131	SHQ1	100	92.374	ENSMFAG00000039148	SHQ1	100	92.374	Macaca_fascicularis
ENSCJAG00000015131	SHQ1	92	91.682	ENSMMUG00000009571	SHQ1	96	91.682	Macaca_mulatta
ENSCJAG00000015131	SHQ1	99	69.844	ENSMMUG00000021761	-	99	69.844	Macaca_mulatta
ENSCJAG00000015131	SHQ1	100	92.374	ENSMNEG00000032667	SHQ1	100	92.374	Macaca_nemestrina
ENSCJAG00000015131	SHQ1	100	92.374	ENSMLEG00000038493	SHQ1	100	92.374	Mandrillus_leucophaeus
ENSCJAG00000015131	SHQ1	72	59.952	ENSMAMG00000023432	shq1	64	59.574	Mastacembelus_armatus
ENSCJAG00000015131	SHQ1	76	60.090	ENSMZEG00005008649	shq1	68	60.911	Maylandia_zebra
ENSCJAG00000015131	SHQ1	99	62.827	ENSMGAG00000009640	SHQ1	93	61.713	Meleagris_gallopavo
ENSCJAG00000015131	SHQ1	100	74.828	ENSMAUG00000022030	Shq1	100	82.377	Mesocricetus_auratus
ENSCJAG00000015131	SHQ1	100	82.222	ENSMICG00000009224	SHQ1	100	82.222	Microcebus_murinus
ENSCJAG00000015131	SHQ1	98	74.912	ENSMOCG00000017836	Shq1	98	83.197	Microtus_ochrogaster
ENSCJAG00000015131	SHQ1	75	60.046	ENSMMOG00000010569	shq1	69	60.922	Mola_mola
ENSCJAG00000015131	SHQ1	95	64.195	ENSMODG00000003926	SHQ1	98	64.195	Monodelphis_domestica
ENSCJAG00000015131	SHQ1	99	51.783	ENSMALG00000008870	shq1	92	51.265	Monopterus_albus
ENSCJAG00000015131	SHQ1	98	73.814	MGP_CAROLIEiJ_G0028689	Shq1	98	81.557	Mus_caroli
ENSCJAG00000015131	SHQ1	98	74.692	ENSMUSG00000035378	Shq1	98	81.557	Mus_musculus
ENSCJAG00000015131	SHQ1	98	75.575	MGP_PahariEiJ_G0022440	Shq1	97	82.787	Mus_pahari
ENSCJAG00000015131	SHQ1	98	75.044	MGP_SPRETEiJ_G0029717	Shq1	98	81.557	Mus_spretus
ENSCJAG00000015131	SHQ1	100	82.729	ENSMPUG00000017006	SHQ1	98	81.002	Mustela_putorius_furo
ENSCJAG00000015131	SHQ1	89	76.699	ENSMLUG00000013539	SHQ1	96	75.048	Myotis_lucifugus
ENSCJAG00000015131	SHQ1	98	68.375	ENSNGAG00000023317	Shq1	99	68.728	Nannospalax_galili
ENSCJAG00000015131	SHQ1	61	58.263	ENSNBRG00000024004	shq1	62	59.146	Neolamprologus_brichardi
ENSCJAG00000015131	SHQ1	100	93.414	ENSNLEG00000002731	SHQ1	100	93.414	Nomascus_leucogenys
ENSCJAG00000015131	SHQ1	93	45.438	ENSMEUG00000009350	-	99	44.708	Notamacropus_eugenii
ENSCJAG00000015131	SHQ1	98	72.359	ENSODEG00000009192	SHQ1	97	82.917	Octodon_degus
ENSCJAG00000015131	SHQ1	76	60.090	ENSONIG00000020264	shq1	68	60.911	Oreochromis_niloticus
ENSCJAG00000015131	SHQ1	100	77.986	ENSOCUG00000016695	SHQ1	100	77.911	Oryctolagus_cuniculus
ENSCJAG00000015131	SHQ1	74	58.565	ENSORLG00000023538	shq1	80	57.848	Oryzias_latipes
ENSCJAG00000015131	SHQ1	74	59.491	ENSORLG00020003697	shq1	79	58.744	Oryzias_latipes_hni
ENSCJAG00000015131	SHQ1	74	59.028	ENSORLG00015021040	shq1	74	59.036	Oryzias_latipes_hsok
ENSCJAG00000015131	SHQ1	74	59.954	ENSOMEG00000001225	shq1	74	60.000	Oryzias_melastigma
ENSCJAG00000015131	SHQ1	98	84.293	ENSOGAG00000003898	SHQ1	100	84.468	Otolemur_garnettii
ENSCJAG00000015131	SHQ1	100	77.645	ENSOARG00000009547	SHQ1	100	78.498	Ovis_aries
ENSCJAG00000015131	SHQ1	99	71.773	ENSPPAG00000043263	-	99	71.773	Pan_paniscus
ENSCJAG00000015131	SHQ1	100	93.761	ENSPPAG00000027714	SHQ1	100	93.761	Pan_paniscus
ENSCJAG00000015131	SHQ1	100	81.865	ENSPPRG00000004769	SHQ1	100	80.484	Panthera_pardus
ENSCJAG00000015131	SHQ1	100	78.238	ENSPTIG00000011478	SHQ1	100	76.857	Panthera_tigris_altaica
ENSCJAG00000015131	SHQ1	99	70.912	ENSPTRG00000048303	-	99	70.912	Pan_troglodytes
ENSCJAG00000015131	SHQ1	100	93.934	ENSPTRG00000015106	SHQ1	100	93.934	Pan_troglodytes
ENSCJAG00000015131	SHQ1	100	92.894	ENSPANG00000002881	SHQ1	100	92.894	Papio_anubis
ENSCJAG00000015131	SHQ1	74	58.701	ENSPKIG00000021517	shq1	91	49.464	Paramormyrops_kingsleyae
ENSCJAG00000015131	SHQ1	99	64.510	ENSPSIG00000005536	SHQ1	93	65.734	Pelodiscus_sinensis
ENSCJAG00000015131	SHQ1	77	58.108	ENSPMGG00000008838	shq1	75	58.520	Periophthalmus_magnuspinnatus
ENSCJAG00000015131	SHQ1	100	76.207	ENSPEMG00000000251	Shq1	98	83.607	Peromyscus_maniculatus_bairdii
ENSCJAG00000015131	SHQ1	76	53.540	ENSPMAG00000005372	shq1	99	54.867	Petromyzon_marinus
ENSCJAG00000015131	SHQ1	75	59.909	ENSPFOG00000003118	shq1	97	52.847	Poecilia_formosa
ENSCJAG00000015131	SHQ1	60	57.184	ENSPMEG00000011076	shq1	96	50.427	Poecilia_mexicana
ENSCJAG00000015131	SHQ1	66	56.995	ENSPREG00000000591	shq1	92	50.784	Poecilia_reticulata
ENSCJAG00000015131	SHQ1	100	92.894	ENSPPYG00000013717	SHQ1	100	92.894	Pongo_abelii
ENSCJAG00000015131	SHQ1	96	81.115	ENSPCAG00000009035	SHQ1	99	80.212	Procavia_capensis
ENSCJAG00000015131	SHQ1	100	83.904	ENSPCOG00000008415	SHQ1	100	84.589	Propithecus_coquereli
ENSCJAG00000015131	SHQ1	100	82.556	ENSPVAG00000017392	SHQ1	100	82.729	Pteropus_vampyrus
ENSCJAG00000015131	SHQ1	76	60.090	ENSPNYG00000003878	shq1	68	60.911	Pundamilia_nyererei
ENSCJAG00000015131	SHQ1	74	58.756	ENSPNAG00000026840	shq1	91	50.000	Pygocentrus_nattereri
ENSCJAG00000015131	SHQ1	99	70.315	ENSRNOG00000005433	Shq1	99	71.310	Rattus_norvegicus
ENSCJAG00000015131	SHQ1	99	87.762	ENSRBIG00000026280	SHQ1	99	87.762	Rhinopithecus_bieti
ENSCJAG00000015131	SHQ1	99	92.469	ENSRROG00000034126	SHQ1	99	92.469	Rhinopithecus_roxellana
ENSCJAG00000015131	SHQ1	100	88.021	ENSSBOG00000021038	SHQ1	100	88.021	Saimiri_boliviensis_boliviensis
ENSCJAG00000015131	SHQ1	98	64.499	ENSSHAG00000015077	SHQ1	99	64.851	Sarcophilus_harrisii
ENSCJAG00000015131	SHQ1	77	63.982	ENSSFOG00015016241	shq1	91	55.240	Scleropages_formosus
ENSCJAG00000015131	SHQ1	76	62.754	ENSSMAG00000016151	shq1	72	62.754	Scophthalmus_maximus
ENSCJAG00000015131	SHQ1	74	62.587	ENSSDUG00000011986	shq1	67	62.500	Seriola_dumerili
ENSCJAG00000015131	SHQ1	72	61.408	ENSSLDG00000013908	shq1	67	62.136	Seriola_lalandi_dorsalis
ENSCJAG00000015131	SHQ1	100	64.298	ENSSARG00000007119	SHQ1	100	62.738	Sorex_araneus
ENSCJAG00000015131	SHQ1	81	61.620	ENSSPUG00000011526	-	87	62.900	Sphenodon_punctatus
ENSCJAG00000015131	SHQ1	99	79.239	ENSSSCG00000011518	SHQ1	99	78.547	Sus_scrofa
ENSCJAG00000015131	SHQ1	99	62.823	ENSTGUG00000009933	SHQ1	100	62.823	Taeniopygia_guttata
ENSCJAG00000015131	SHQ1	72	56.867	ENSTRUG00000009446	shq1	75	57.047	Takifugu_rubripes
ENSCJAG00000015131	SHQ1	72	57.212	ENSTNIG00000007354	shq1	90	57.212	Tetraodon_nigroviridis
ENSCJAG00000015131	SHQ1	80	93.617	ENSTBEG00000011295	SHQ1	80	93.617	Tupaia_belangeri
ENSCJAG00000015131	SHQ1	100	77.586	ENSTTRG00000005320	SHQ1	100	78.621	Tursiops_truncatus
ENSCJAG00000015131	SHQ1	98	80.776	ENSUMAG00000024031	SHQ1	97	79.894	Ursus_maritimus
ENSCJAG00000015131	SHQ1	92	71.536	ENSVPAG00000004880	SHQ1	100	70.599	Vicugna_pacos
ENSCJAG00000015131	SHQ1	100	80.656	ENSVVUG00000013906	SHQ1	99	81.347	Vulpes_vulpes
ENSCJAG00000015131	SHQ1	77	65.315	ENSXETG00000032215	shq1	92	55.363	Xenopus_tropicalis