EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000015317 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 622 bases
Position: chrNTIC01000001.1:3119847-3120468
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000028199	APOBEC_N	PF08210.11	3.7e-42	1	1
ENSCJAP00000028199	APOBEC_C	PF05240.14	2.6e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000029804	-	399	-	ENSCJAP00000028199	132 (aa)	-	H9KX45

Gene Model

Click here to download ENSCJAG00000015317's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000015317's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000015317	-	95	44.000	ENSCJAG00000012500	-	63	44.000
ENSCJAG00000015317	-	97	47.328	ENSCJAG00000023368	APOBEC3G	66	47.328
ENSCJAG00000015317	-	95	44.882	ENSCJAG00000018856	AICDA	64	44.882
ENSCJAG00000015317	-	93	36.220	ENSCJAG00000012524	APOBEC3H	65	36.220
ENSCJAG00000015317	-	83	35.398	ENSCJAG00000004063	APOBEC2	58	33.846

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000015317	-	100	68.182	ENSG00000244509	APOBEC3C	69	68.182	Homo_sapiens
ENSCJAG00000015317	-	100	68.182	ENSG00000243811	APOBEC3D	69	68.182	Homo_sapiens
ENSCJAG00000015317	-	100	71.970	ENSG00000128394	APOBEC3F	71	71.970	Homo_sapiens
ENSCJAG00000015317	-	100	90.152	ENSANAG00000030088	-	68	90.152	Aotus_nancymaae
ENSCJAG00000015317	-	99	52.273	ENSCAFG00020002615	-	67	52.273	Canis_lupus_dingo
ENSCJAG00000015317	-	98	51.538	ENSTSYG00000030036	-	71	51.538	Carlito_syrichta
ENSCJAG00000015317	-	100	59.055	ENSTSYG00000034260	-	69	59.055	Carlito_syrichta
ENSCJAG00000015317	-	99	58.015	ENSTSYG00000028254	-	71	58.015	Carlito_syrichta
ENSCJAG00000015317	-	100	88.636	ENSCCAG00000030932	-	60	88.636	Cebus_capucinus
ENSCJAG00000015317	-	100	68.182	ENSCATG00000043226	APOBEC3C	69	68.182	Cercocebus_atys
ENSCJAG00000015317	-	100	70.968	ENSCATG00000033502	-	69	68.182	Cercocebus_atys
ENSCJAG00000015317	-	100	67.424	ENSCSAG00000006402	APOBEC3C	69	67.424	Chlorocebus_sabaeus
ENSCJAG00000015317	-	100	68.939	ENSCSAG00000006382	APOBEC3F	70	68.939	Chlorocebus_sabaeus
ENSCJAG00000015317	-	100	64.394	ENSCANG00000031957	-	70	64.394	Colobus_angolensis_palliatus
ENSCJAG00000015317	-	100	68.182	ENSCANG00000032904	-	70	68.182	Colobus_angolensis_palliatus
ENSCJAG00000015317	-	100	65.152	ENSCANG00000039177	APOBEC3C	69	65.152	Colobus_angolensis_palliatus
ENSCJAG00000015317	-	100	66.667	ENSCANG00000033269	-	73	66.667	Colobus_angolensis_palliatus
ENSCJAG00000015317	-	99	42.748	ENSDNOG00000044642	-	66	42.748	Dasypus_novemcinctus
ENSCJAG00000015317	-	95	52.800	ENSEASG00005018641	-	61	52.800	Equus_asinus_asinus
ENSCJAG00000015317	-	100	54.615	ENSECAG00000006071	-	71	54.615	Equus_caballus
ENSCJAG00000015317	-	100	69.697	ENSGGOG00000038678	APOBEC3F	70	69.697	Gorilla_gorilla
ENSCJAG00000015317	-	100	67.424	ENSGGOG00000036587	-	69	67.424	Gorilla_gorilla
ENSCJAG00000015317	-	100	48.819	ENSHGLG00000017315	-	60	49.600	Heterocephalus_glaber_female
ENSCJAG00000015317	-	100	48.120	ENSHGLG00100003105	-	66	48.120	Heterocephalus_glaber_male
ENSCJAG00000015317	-	100	67.424	ENSMFAG00000002331	-	70	67.424	Macaca_fascicularis
ENSCJAG00000015317	-	100	68.182	ENSMFAG00000004037	APOBEC3F	71	68.182	Macaca_fascicularis
ENSCJAG00000015317	-	100	65.909	ENSMFAG00000016792	APOBEC3C	69	65.909	Macaca_fascicularis
ENSCJAG00000015317	-	100	68.939	ENSMMUG00000004017	APOBEC3F	71	67.424	Macaca_mulatta
ENSCJAG00000015317	-	100	65.152	ENSMMUG00000004018	APOBEC3C	68	65.152	Macaca_mulatta
ENSCJAG00000015317	-	100	67.424	ENSMNEG00000043316	APOBEC3D	78	66.667	Macaca_nemestrina
ENSCJAG00000015317	-	100	65.909	ENSMNEG00000045196	APOBEC3C	69	65.909	Macaca_nemestrina
ENSCJAG00000015317	-	100	68.182	ENSMLEG00000029642	APOBEC3F	70	68.182	Mandrillus_leucophaeus
ENSCJAG00000015317	-	100	68.939	ENSMLEG00000036992	APOBEC3C	69	68.939	Mandrillus_leucophaeus
ENSCJAG00000015317	-	98	53.488	ENSMICG00000042615	-	62	53.488	Microcebus_murinus
ENSCJAG00000015317	-	97	50.746	ENSMLUG00000023676	-	83	50.746	Myotis_lucifugus
ENSCJAG00000015317	-	100	66.667	ENSNLEG00000028392	APOBEC3C	69	66.667	Nomascus_leucogenys
ENSCJAG00000015317	-	100	59.091	ENSNLEG00000035811	-	65	59.091	Nomascus_leucogenys
ENSCJAG00000015317	-	95	46.774	ENSOGAG00000030300	-	67	46.774	Otolemur_garnettii
ENSCJAG00000015317	-	95	53.211	ENSOGAG00000033404	-	66	53.211	Otolemur_garnettii
ENSCJAG00000015317	-	98	53.846	ENSOGAG00000032498	-	66	53.846	Otolemur_garnettii
ENSCJAG00000015317	-	100	65.909	ENSPPAG00000028218	-	80	65.909	Pan_paniscus
ENSCJAG00000015317	-	100	68.939	ENSPPAG00000014118	APOBEC3C	69	68.939	Pan_paniscus
ENSCJAG00000015317	-	100	50.000	ENSPPRG00000003726	-	70	50.000	Panthera_pardus
ENSCJAG00000015317	-	100	71.212	ENSPTRG00000014385	APOBEC3C	70	71.212	Pan_troglodytes
ENSCJAG00000015317	-	100	66.667	ENSPTRG00000041588	APOBEC3D	69	66.667	Pan_troglodytes
ENSCJAG00000015317	-	100	68.939	ENSPANG00000010775	APOBEC3F	72	68.939	Papio_anubis
ENSCJAG00000015317	-	100	68.939	ENSPPYG00000011832	APOBEC3C	69	68.939	Pongo_abelii
ENSCJAG00000015317	-	98	58.140	ENSPCOG00000022067	-	98	58.140	Propithecus_coquereli
ENSCJAG00000015317	-	95	61.905	ENSPCOG00000018072	-	95	61.905	Propithecus_coquereli
ENSCJAG00000015317	-	98	48.837	ENSPVAG00000009461	-	52	48.837	Pteropus_vampyrus
ENSCJAG00000015317	-	100	68.939	ENSRBIG00000030323	-	72	67.424	Rhinopithecus_bieti
ENSCJAG00000015317	-	100	69.697	ENSRBIG00000030834	-	69	69.697	Rhinopithecus_bieti
ENSCJAG00000015317	-	100	66.667	ENSRBIG00000042297	-	84	66.667	Rhinopithecus_bieti
ENSCJAG00000015317	-	100	67.424	ENSRROG00000029996	-	71	67.424	Rhinopithecus_roxellana
ENSCJAG00000015317	-	100	69.697	ENSRROG00000028557	-	70	69.697	Rhinopithecus_roxellana
ENSCJAG00000015317	-	100	68.939	ENSRROG00000029045	APOBEC3C	69	68.939	Rhinopithecus_roxellana
ENSCJAG00000015317	-	100	90.152	ENSSBOG00000032780	-	83	90.152	Saimiri_boliviensis_boliviensis
ENSCJAG00000015317	-	95	50.400	ENSUAMG00000004433	-	70	50.400	Ursus_americanus
ENSCJAG00000015317	-	95	50.400	ENSUMAG00000014441	-	59	50.400	Ursus_maritimus
ENSCJAG00000015317	-	84	58.036	ENSVVUG00000014628	-	72	58.036	Vulpes_vulpes