EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000015321 (Gene tree)
Gene ID: 100397850
Gene Symbol: -
Alias: -
Full Name: small nuclear ribonucleoprotein polypeptide C
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 17061 bases
Position: chrNTIC01022223.1:132676846-132693906
Accession: 100397850
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000028223	zf-U1	PF06220.12	1.5e-22	1	1
ENSCJAP00000028213	zf-U1	PF06220.12	2.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000029828	-	480	-	ENSCJAP00000028223	159 (aa)	XP_002746505	F6XG37
ENSCJAT00000029818	-	543	-	ENSCJAP00000028213	180 (aa)	-	F6XHC3

Gene Model

Click here to download ENSCJAG00000015321's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000015321's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000015321	-	100	98.742	ENSCJAG00000043055	-	100	98.742
ENSCJAG00000015321	-	100	97.484	ENSCJAG00000041822	-	100	97.484

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000015321	-	100	100.000	ENSG00000124562	SNRPC	100	100.000	Homo_sapiens
ENSCJAG00000015321	-	100	98.113	ENSAMEG00000000963	SNRPC	100	95.580	Ailuropoda_melanoleuca
ENSCJAG00000015321	-	99	96.815	ENSACAG00000015721	SNRPC	99	88.268	Anolis_carolinensis
ENSCJAG00000015321	-	100	87.421	ENSANAG00000021026	-	100	80.503	Aotus_nancymaae
ENSCJAG00000015321	-	100	89.308	ENSANAG00000019726	-	92	89.937	Aotus_nancymaae
ENSCJAG00000015321	-	100	99.371	ENSANAG00000007843	-	100	99.371	Aotus_nancymaae
ENSCJAG00000015321	-	100	76.101	ENSANAG00000021444	-	61	83.333	Aotus_nancymaae
ENSCJAG00000015321	-	100	100.000	ENSANAG00000019696	-	100	100.000	Aotus_nancymaae
ENSCJAG00000015321	-	100	95.597	ENSANAG00000019157	-	100	95.597	Aotus_nancymaae
ENSCJAG00000015321	-	99	91.772	ENSANAG00000020588	-	92	91.772	Aotus_nancymaae
ENSCJAG00000015321	-	100	84.906	ENSAMXG00000032641	snrpc	100	72.956	Astyanax_mexicanus
ENSCJAG00000015321	-	100	100.000	ENSBTAG00000024549	SNRPC	100	100.000	Bos_taurus
ENSCJAG00000015321	-	74	100.000	ENSCAFG00000001231	-	93	100.000	Canis_familiaris
ENSCJAG00000015321	-	100	97.500	ENSCAFG00000028988	-	100	97.500	Canis_familiaris
ENSCJAG00000015321	-	100	95.597	ENSCAFG00000031775	-	100	95.597	Canis_familiaris
ENSCJAG00000015321	-	100	78.616	ENSCAFG00000025525	-	100	78.616	Canis_familiaris
ENSCJAG00000015321	-	100	78.652	ENSCAFG00020026577	-	100	84.831	Canis_lupus_dingo
ENSCJAG00000015321	-	100	95.597	ENSCAFG00020017383	-	100	95.597	Canis_lupus_dingo
ENSCJAG00000015321	-	99	88.535	ENSCAFG00020009944	-	90	88.535	Canis_lupus_dingo
ENSCJAG00000015321	-	100	100.000	ENSCAFG00020005945	-	100	100.000	Canis_lupus_dingo
ENSCJAG00000015321	-	100	96.226	ENSCAFG00020005758	-	100	96.226	Canis_lupus_dingo
ENSCJAG00000015321	-	100	99.371	ENSCHIG00000012087	-	100	99.371	Capra_hircus
ENSCJAG00000015321	-	100	72.327	ENSCHIG00000005039	-	100	71.069	Capra_hircus
ENSCJAG00000015321	-	100	100.000	ENSTSYG00000011216	-	100	100.000	Carlito_syrichta
ENSCJAG00000015321	-	100	83.019	ENSTSYG00000025721	-	100	76.101	Carlito_syrichta
ENSCJAG00000015321	-	99	89.241	ENSTSYG00000029745	-	62	94.309	Carlito_syrichta
ENSCJAG00000015321	-	89	100.000	ENSCAPG00000005161	SNRPC	100	100.000	Cavia_aperea
ENSCJAG00000015321	-	100	100.000	ENSCPOG00000008563	SNRPC	100	100.000	Cavia_porcellus
ENSCJAG00000015321	-	98	91.667	ENSCCAG00000022751	-	97	90.566	Cebus_capucinus
ENSCJAG00000015321	-	99	81.529	ENSCCAG00000026624	-	66	75.796	Cebus_capucinus
ENSCJAG00000015321	-	100	69.811	ENSCCAG00000028293	-	63	86.585	Cebus_capucinus
ENSCJAG00000015321	-	98	80.128	ENSCCAG00000022209	-	95	80.128	Cebus_capucinus
ENSCJAG00000015321	-	100	94.340	ENSCCAG00000036059	-	89	94.340	Cebus_capucinus
ENSCJAG00000015321	-	100	100.000	ENSCATG00000035787	SNRPC	100	100.000	Cercocebus_atys
ENSCJAG00000015321	-	99	81.529	ENSCLAG00000010242	-	96	82.051	Chinchilla_lanigera
ENSCJAG00000015321	-	100	100.000	ENSCLAG00000016920	SNRPC	100	100.000	Chinchilla_lanigera
ENSCJAG00000015321	-	100	89.326	ENSCSAG00000009821	SNRPC	100	89.326	Chlorocebus_sabaeus
ENSCJAG00000015321	-	100	81.132	ENSCHOG00000011439	SNRPC	100	77.222	Choloepus_hoffmanni
ENSCJAG00000015321	-	100	97.484	ENSCPBG00000027142	SNRPC	100	97.484	Chrysemys_picta_bellii
ENSCJAG00000015321	-	97	49.351	ENSCING00000021229	ci-zf(matrin)-4	51	85.484	Ciona_intestinalis
ENSCJAG00000015321	-	100	100.000	ENSCANG00000028035	SNRPC	100	100.000	Colobus_angolensis_palliatus
ENSCJAG00000015321	-	100	87.421	ENSCGRG00001021483	-	100	85.535	Cricetulus_griseus_chok1gshd
ENSCJAG00000015321	-	100	99.371	ENSCGRG00001009011	-	100	99.371	Cricetulus_griseus_chok1gshd
ENSCJAG00000015321	-	100	97.484	ENSCGRG00000005005	Snrpc	100	98.742	Cricetulus_griseus_crigri
ENSCJAG00000015321	-	100	84.906	ENSDARG00000009871	snrpc	100	84.906	Danio_rerio
ENSCJAG00000015321	-	100	98.742	ENSDNOG00000034699	-	99	98.742	Dasypus_novemcinctus
ENSCJAG00000015321	-	75	99.160	ENSDNOG00000042403	-	94	99.160	Dasypus_novemcinctus
ENSCJAG00000015321	-	100	81.132	ENSDORG00000005955	Snrpc	75	77.654	Dipodomys_ordii
ENSCJAG00000015321	-	95	79.470	ENSDORG00000029823	-	56	96.104	Dipodomys_ordii
ENSCJAG00000015321	-	98	96.154	ENSETEG00000008268	-	100	96.154	Echinops_telfairi
ENSCJAG00000015321	-	52	95.181	ENSETEG00000008756	-	94	83.838	Echinops_telfairi
ENSCJAG00000015321	-	98	92.308	ENSETEG00000011265	-	100	92.308	Echinops_telfairi
ENSCJAG00000015321	-	100	100.000	ENSEASG00005021007	SNRPC	100	100.000	Equus_asinus_asinus
ENSCJAG00000015321	-	100	100.000	ENSECAG00000026848	SNRPC	100	100.000	Equus_caballus
ENSCJAG00000015321	-	99	79.747	ENSEEUG00000014633	SNRPC	100	77.222	Erinaceus_europaeus
ENSCJAG00000015321	-	100	78.616	ENSELUG00000000815	SNRPC	50	94.872	Esox_lucius
ENSCJAG00000015321	-	100	93.082	ENSFCAG00000031775	-	88	93.082	Felis_catus
ENSCJAG00000015321	-	100	100.000	ENSFCAG00000044077	-	100	100.000	Felis_catus
ENSCJAG00000015321	-	100	98.742	ENSFALG00000003756	SNRPC	100	98.742	Ficedula_albicollis
ENSCJAG00000015321	-	100	100.000	ENSFDAG00000018111	SNRPC	100	100.000	Fukomys_damarensis
ENSCJAG00000015321	-	100	96.875	ENSGALG00000002773	SNRPC	100	96.875	Gallus_gallus
ENSCJAG00000015321	-	100	97.484	ENSGAGG00000003063	SNRPC	100	97.484	Gopherus_agassizii
ENSCJAG00000015321	-	100	100.000	ENSGGOG00000012499	SNRPC	100	100.000	Gorilla_gorilla
ENSCJAG00000015321	-	100	100.000	ENSHGLG00000013981	SNRPC	100	100.000	Heterocephalus_glaber_female
ENSCJAG00000015321	-	100	81.132	ENSHGLG00000017741	-	100	78.616	Heterocephalus_glaber_female
ENSCJAG00000015321	-	81	75.194	ENSHGLG00000005871	-	100	75.472	Heterocephalus_glaber_female
ENSCJAG00000015321	-	100	100.000	ENSHGLG00100009478	SNRPC	100	100.000	Heterocephalus_glaber_male
ENSCJAG00000015321	-	100	94.969	ENSHGLG00100017764	-	100	94.969	Heterocephalus_glaber_male
ENSCJAG00000015321	-	100	81.132	ENSHGLG00100010786	-	100	78.616	Heterocephalus_glaber_male
ENSCJAG00000015321	-	100	85.535	ENSIPUG00000024851	snrpc	100	85.535	Ictalurus_punctatus
ENSCJAG00000015321	-	100	100.000	ENSSTOG00000013786	SNRPC	100	100.000	Ictidomys_tridecemlineatus
ENSCJAG00000015321	-	100	99.371	ENSJJAG00000021741	Snrpc	100	99.371	Jaculus_jaculus
ENSCJAG00000015321	-	100	88.125	ENSLACG00000013753	SNRPC	89	90.625	Latimeria_chalumnae
ENSCJAG00000015321	-	100	100.000	ENSLAFG00000013534	SNRPC	100	100.000	Loxodonta_africana
ENSCJAG00000015321	-	100	100.000	ENSMFAG00000031764	-	100	100.000	Macaca_fascicularis
ENSCJAG00000015321	-	100	99.371	ENSMFAG00000030525	-	100	99.371	Macaca_fascicularis
ENSCJAG00000015321	-	100	89.937	ENSMMUG00000045425	-	100	89.937	Macaca_mulatta
ENSCJAG00000015321	-	100	98.742	ENSMMUG00000000869	-	97	98.742	Macaca_mulatta
ENSCJAG00000015321	-	100	98.742	ENSMMUG00000039415	-	100	98.742	Macaca_mulatta
ENSCJAG00000015321	-	100	100.000	ENSMNEG00000032731	SNRPC	100	100.000	Macaca_nemestrina
ENSCJAG00000015321	-	100	100.000	ENSMLEG00000033916	-	100	100.000	Mandrillus_leucophaeus
ENSCJAG00000015321	-	97	90.968	ENSMLEG00000040224	-	99	83.908	Mandrillus_leucophaeus
ENSCJAG00000015321	-	100	96.855	ENSMGAG00000006054	SNRPC	100	96.855	Meleagris_gallopavo
ENSCJAG00000015321	-	100	99.371	ENSMICG00000007339	-	100	99.371	Microcebus_murinus
ENSCJAG00000015321	-	100	84.906	ENSMICG00000036552	-	96	76.301	Microcebus_murinus
ENSCJAG00000015321	-	100	88.050	ENSMICG00000009130	-	100	88.679	Microcebus_murinus
ENSCJAG00000015321	-	100	99.371	ENSMICG00000032183	-	100	99.371	Microcebus_murinus
ENSCJAG00000015321	-	100	99.371	ENSMOCG00000017609	Snrpc	100	99.371	Microtus_ochrogaster
ENSCJAG00000015321	-	100	98.742	ENSMODG00000013904	-	100	98.742	Monodelphis_domestica
ENSCJAG00000015321	-	100	99.371	MGP_CAROLIEiJ_G0021308	Snrpc	100	99.371	Mus_caroli
ENSCJAG00000015321	-	100	99.371	ENSMUSG00000024217	Snrpc	100	99.371	Mus_musculus
ENSCJAG00000015321	-	74	99.153	MGP_SPRETEiJ_G0022221	-	98	99.153	Mus_spretus
ENSCJAG00000015321	-	100	98.113	ENSMPUG00000003210	SNRPC	100	99.371	Mustela_putorius_furo
ENSCJAG00000015321	-	100	98.113	ENSMLUG00000002488	SNRPC	100	99.371	Myotis_lucifugus
ENSCJAG00000015321	-	100	99.371	ENSNGAG00000019686	Snrpc	100	99.371	Nannospalax_galili
ENSCJAG00000015321	-	100	100.000	ENSNLEG00000034810	SNRPC	100	100.000	Nomascus_leucogenys
ENSCJAG00000015321	-	89	99.296	ENSMEUG00000009300	SNRPC	100	99.296	Notamacropus_eugenii
ENSCJAG00000015321	-	100	100.000	ENSODEG00000018985	-	100	100.000	Octodon_degus
ENSCJAG00000015321	-	100	100.000	ENSODEG00000017080	-	100	100.000	Octodon_degus
ENSCJAG00000015321	-	100	100.000	ENSODEG00000020370	-	100	100.000	Octodon_degus
ENSCJAG00000015321	-	77	94.309	ENSODEG00000006008	-	88	94.309	Octodon_degus
ENSCJAG00000015321	-	100	99.371	ENSODEG00000020201	-	100	99.371	Octodon_degus
ENSCJAG00000015321	-	100	98.742	ENSODEG00000019633	-	100	98.742	Octodon_degus
ENSCJAG00000015321	-	91	95.270	ENSOANG00000003405	SNRPC	100	95.270	Ornithorhynchus_anatinus
ENSCJAG00000015321	-	100	97.484	ENSOCUG00000023292	-	100	97.484	Oryctolagus_cuniculus
ENSCJAG00000015321	-	100	100.000	ENSOCUG00000026668	-	100	100.000	Oryctolagus_cuniculus
ENSCJAG00000015321	-	100	98.742	ENSOCUG00000026430	-	99	98.742	Oryctolagus_cuniculus
ENSCJAG00000015321	-	99	99.363	ENSOGAG00000008755	-	100	93.889	Otolemur_garnettii
ENSCJAG00000015321	-	97	84.416	ENSOGAG00000028405	-	99	81.818	Otolemur_garnettii
ENSCJAG00000015321	-	100	98.113	ENSOGAG00000026269	-	100	98.113	Otolemur_garnettii
ENSCJAG00000015321	-	100	100.000	ENSOARG00000010823	SNRPC	100	100.000	Ovis_aries
ENSCJAG00000015321	-	100	100.000	ENSPPAG00000043871	SNRPC	100	100.000	Pan_paniscus
ENSCJAG00000015321	-	100	100.000	ENSPPRG00000008647	-	100	100.000	Panthera_pardus
ENSCJAG00000015321	-	96	60.390	ENSPPRG00000016017	-	86	54.902	Panthera_pardus
ENSCJAG00000015321	-	100	100.000	ENSPTIG00000021867	-	100	100.000	Panthera_tigris_altaica
ENSCJAG00000015321	-	97	60.000	ENSPTIG00000013329	-	50	83.117	Panthera_tigris_altaica
ENSCJAG00000015321	-	100	100.000	ENSPTRG00000018070	SNRPC	100	100.000	Pan_troglodytes
ENSCJAG00000015321	-	100	100.000	ENSPANG00000022802	-	100	100.000	Papio_anubis
ENSCJAG00000015321	-	100	88.679	ENSPANG00000018228	-	94	88.679	Papio_anubis
ENSCJAG00000015321	-	99	96.178	ENSPSIG00000004876	SNRPC	77	96.815	Pelodiscus_sinensis
ENSCJAG00000015321	-	100	87.421	ENSPEMG00000002763	-	100	85.535	Peromyscus_maniculatus_bairdii
ENSCJAG00000015321	-	100	99.371	ENSPEMG00000010773	Snrpc	100	99.371	Peromyscus_maniculatus_bairdii
ENSCJAG00000015321	-	52	100.000	ENSPPYG00000029902	-	84	100.000	Pongo_abelii
ENSCJAG00000015321	-	99	99.363	ENSPCAG00000016885	SNRPC	100	91.667	Procavia_capensis
ENSCJAG00000015321	-	100	100.000	ENSPCOG00000004904	SNRPC	100	100.000	Propithecus_coquereli
ENSCJAG00000015321	-	99	98.726	ENSPVAG00000015597	SNRPC	100	92.818	Pteropus_vampyrus
ENSCJAG00000015321	-	100	99.371	ENSRNOG00000000493	Snrpc	100	99.371	Rattus_norvegicus
ENSCJAG00000015321	-	100	99.371	ENSRBIG00000014819	-	100	99.371	Rhinopithecus_bieti
ENSCJAG00000015321	-	100	99.371	ENSRBIG00000022998	-	100	99.371	Rhinopithecus_bieti
ENSCJAG00000015321	-	100	100.000	ENSRBIG00000037567	-	100	100.000	Rhinopithecus_bieti
ENSCJAG00000015321	-	100	89.308	ENSRBIG00000036353	-	83	89.308	Rhinopithecus_bieti
ENSCJAG00000015321	-	100	100.000	ENSRROG00000041300	SNRPC	100	100.000	Rhinopithecus_roxellana
ENSCJAG00000015321	-	98	81.410	ENSSBOG00000032882	-	95	80.380	Saimiri_boliviensis_boliviensis
ENSCJAG00000015321	-	95	82.781	ENSSBOG00000032361	-	66	81.250	Saimiri_boliviensis_boliviensis
ENSCJAG00000015321	-	98	82.692	ENSSBOG00000023189	-	91	82.692	Saimiri_boliviensis_boliviensis
ENSCJAG00000015321	-	100	100.000	ENSSBOG00000031528	-	100	100.000	Saimiri_boliviensis_boliviensis
ENSCJAG00000015321	-	99	98.726	ENSSHAG00000000945	-	95	94.152	Sarcophilus_harrisii
ENSCJAG00000015321	-	100	81.132	ENSSFOG00015019150	snrpc	100	81.132	Scleropages_formosus
ENSCJAG00000015321	-	100	76.101	ENSSARG00000008970	SNRPC	96	74.269	Sorex_araneus
ENSCJAG00000015321	-	100	98.113	ENSSPUG00000002502	SNRPC	100	98.113	Sphenodon_punctatus
ENSCJAG00000015321	-	100	100.000	ENSSSCG00000001531	SNRPC	100	100.000	Sus_scrofa
ENSCJAG00000015321	-	100	97.484	ENSTGUG00000001773	SNRPC	99	98.726	Taeniopygia_guttata
ENSCJAG00000015321	-	98	73.718	ENSTBEG00000015356	-	68	91.667	Tupaia_belangeri
ENSCJAG00000015321	-	89	72.535	ENSTBEG00000016759	-	79	72.535	Tupaia_belangeri
ENSCJAG00000015321	-	98	92.308	ENSTBEG00000013022	-	100	92.308	Tupaia_belangeri
ENSCJAG00000015321	-	100	98.113	ENSTTRG00000007827	SNRPC	100	94.505	Tursiops_truncatus
ENSCJAG00000015321	-	75	99.160	ENSUAMG00000014125	SNRPC	80	99.160	Ursus_americanus
ENSCJAG00000015321	-	100	89.326	ENSUMAG00000010869	SNRPC	100	89.326	Ursus_maritimus
ENSCJAG00000015321	-	100	66.111	ENSVPAG00000003106	SNRPC	100	66.111	Vicugna_pacos
ENSCJAG00000015321	-	100	98.742	ENSVVUG00000021947	-	100	98.742	Vulpes_vulpes
ENSCJAG00000015321	-	97	94.805	ENSVVUG00000010467	-	95	88.953	Vulpes_vulpes
ENSCJAG00000015321	-	100	89.937	ENSXETG00000024721	snrpc	100	89.937	Xenopus_tropicalis