EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000015466 (Gene tree)
Gene ID: 100414825
Gene Symbol: TRNT1
Alias: CCA1|CGI-47|MtCCA
Full Name: tRNA nucleotidyl transferase 1
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 17347 bases
Position: chrNTIC01006668.1:52764973-52782319
Accession: 100414825
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000028497	PolyA_pol	PF01743.20	1.6e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000030112	TRNT1-201	1332	-	ENSCJAP00000028497	434 (aa)	XP_002758621	U3EM02
ENSCJAT00000084859	TRNT1-202	174	-	ENSCJAP00000058322	57 (aa)	-	A0A2R8P985

Gene Model

Click here to download ENSCJAG00000015466's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000015466's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000015466	TRNT1	100	96.544	ENSG00000072756	TRNT1	100	96.544	Homo_sapiens
ENSCJAG00000015466	TRNT1	93	68.889	ENSAPOG00000013687	trnt1	95	68.889	Acanthochromis_polyacanthus
ENSCJAG00000015466	TRNT1	100	92.202	ENSAMEG00000014520	TRNT1	100	92.202	Ailuropoda_melanoleuca
ENSCJAG00000015466	TRNT1	98	67.765	ENSACIG00000021706	trnt1	99	67.765	Amphilophus_citrinellus
ENSCJAG00000015466	TRNT1	96	68.675	ENSAOCG00000024612	trnt1	97	68.675	Amphiprion_ocellaris
ENSCJAG00000015466	TRNT1	94	61.425	ENSAPEG00000022627	trnt1	94	61.425	Amphiprion_percula
ENSCJAG00000015466	TRNT1	93	70.720	ENSATEG00000008928	trnt1	99	70.720	Anabas_testudineus
ENSCJAG00000015466	TRNT1	89	77.003	ENSAPLG00000004258	TRNT1	96	77.003	Anas_platyrhynchos
ENSCJAG00000015466	TRNT1	98	75.581	ENSACAG00000005657	TRNT1	98	75.581	Anolis_carolinensis
ENSCJAG00000015466	TRNT1	100	99.078	ENSANAG00000024802	TRNT1	100	99.078	Aotus_nancymaae
ENSCJAG00000015466	TRNT1	98	67.371	ENSACLG00000022227	trnt1	99	67.371	Astatotilapia_calliptera
ENSCJAG00000015466	TRNT1	97	68.646	ENSAMXG00000003960	trnt1	97	68.483	Astyanax_mexicanus
ENSCJAG00000015466	TRNT1	100	91.475	ENSBTAG00000019534	TRNT1	100	91.475	Bos_taurus
ENSCJAG00000015466	TRNT1	94	44.181	WBGene00010089	hpo-31	94	44.181	Caenorhabditis_elegans
ENSCJAG00000015466	TRNT1	100	91.705	ENSCAFG00000005985	TRNT1	99	91.705	Canis_familiaris
ENSCJAG00000015466	TRNT1	100	91.705	ENSCAFG00020014746	TRNT1	99	91.705	Canis_lupus_dingo
ENSCJAG00000015466	TRNT1	100	91.475	ENSCHIG00000007030	TRNT1	99	91.475	Capra_hircus
ENSCJAG00000015466	TRNT1	100	95.161	ENSTSYG00000013390	TRNT1	100	95.161	Carlito_syrichta
ENSCJAG00000015466	TRNT1	87	74.603	ENSCAPG00000006891	TRNT1	100	74.603	Cavia_aperea
ENSCJAG00000015466	TRNT1	99	91.917	ENSCPOG00000007849	TRNT1	100	91.045	Cavia_porcellus
ENSCJAG00000015466	TRNT1	95	94.471	ENSCCAG00000002919	TRNT1	100	96.758	Cebus_capucinus
ENSCJAG00000015466	TRNT1	99	96.536	ENSCATG00000031985	TRNT1	99	96.536	Cercocebus_atys
ENSCJAG00000015466	TRNT1	99	92.379	ENSCLAG00000005186	TRNT1	99	92.379	Chinchilla_lanigera
ENSCJAG00000015466	TRNT1	100	97.005	ENSCSAG00000011052	TRNT1	100	97.005	Chlorocebus_sabaeus
ENSCJAG00000015466	TRNT1	85	91.089	ENSCHOG00000005712	TRNT1	85	91.089	Choloepus_hoffmanni
ENSCJAG00000015466	TRNT1	99	78.472	ENSCPBG00000017636	TRNT1	98	78.472	Chrysemys_picta_bellii
ENSCJAG00000015466	TRNT1	93	43.826	ENSCING00000007069	-	100	43.826	Ciona_intestinalis
ENSCJAG00000015466	TRNT1	97	44.706	ENSCSAVG00000007494	-	100	44.706	Ciona_savignyi
ENSCJAG00000015466	TRNT1	100	96.544	ENSCANG00000039030	TRNT1	100	96.544	Colobus_angolensis_palliatus
ENSCJAG00000015466	TRNT1	100	91.705	ENSCGRG00001009998	Trnt1	100	91.705	Cricetulus_griseus_chok1gshd
ENSCJAG00000015466	TRNT1	100	91.705	ENSCGRG00000013410	Trnt1	100	91.705	Cricetulus_griseus_crigri
ENSCJAG00000015466	TRNT1	94	68.227	ENSCSEG00000008157	trnt1	95	68.227	Cynoglossus_semilaevis
ENSCJAG00000015466	TRNT1	94	69.704	ENSCVAG00000019770	trnt1	96	69.704	Cyprinodon_variegatus
ENSCJAG00000015466	TRNT1	94	70.098	ENSDARG00000075297	trnt1	95	70.098	Danio_rerio
ENSCJAG00000015466	TRNT1	100	91.935	ENSDNOG00000008837	TRNT1	100	91.935	Dasypus_novemcinctus
ENSCJAG00000015466	TRNT1	100	89.862	ENSDORG00000014035	Trnt1	100	89.862	Dipodomys_ordii
ENSCJAG00000015466	TRNT1	92	49.383	FBgn0037369	CG2100	83	49.383	Drosophila_melanogaster
ENSCJAG00000015466	TRNT1	57	90.763	ENSETEG00000018177	TRNT1	100	90.763	Echinops_telfairi
ENSCJAG00000015466	TRNT1	93	62.035	ENSEBUG00000012779	-	95	62.035	Eptatretus_burgeri
ENSCJAG00000015466	TRNT1	100	94.470	ENSEASG00005003577	TRNT1	100	94.470	Equus_asinus_asinus
ENSCJAG00000015466	TRNT1	100	94.240	ENSECAG00000014420	TRNT1	100	94.240	Equus_caballus
ENSCJAG00000015466	TRNT1	100	89.862	ENSEEUG00000009567	TRNT1	100	89.862	Erinaceus_europaeus
ENSCJAG00000015466	TRNT1	94	70.098	ENSELUG00000003802	trnt1	95	70.098	Esox_lucius
ENSCJAG00000015466	TRNT1	100	91.935	ENSFCAG00000026805	TRNT1	99	91.935	Felis_catus
ENSCJAG00000015466	TRNT1	89	74.805	ENSFALG00000013539	TRNT1	100	74.805	Ficedula_albicollis
ENSCJAG00000015466	TRNT1	99	91.917	ENSFDAG00000018412	TRNT1	99	91.917	Fukomys_damarensis
ENSCJAG00000015466	TRNT1	96	67.612	ENSFHEG00000019294	trnt1	99	67.612	Fundulus_heteroclitus
ENSCJAG00000015466	TRNT1	93	67.407	ENSGMOG00000007460	trnt1	95	67.407	Gadus_morhua
ENSCJAG00000015466	TRNT1	97	72.770	ENSGALG00000017368	TRNT1	99	72.770	Gallus_gallus
ENSCJAG00000015466	TRNT1	94	69.212	ENSGAFG00000008647	trnt1	96	69.212	Gambusia_affinis
ENSCJAG00000015466	TRNT1	94	67.488	ENSGACG00000011903	trnt1	96	68.063	Gasterosteus_aculeatus
ENSCJAG00000015466	TRNT1	99	79.167	ENSGAGG00000020942	TRNT1	98	79.167	Gopherus_agassizii
ENSCJAG00000015466	TRNT1	100	96.774	ENSGGOG00000015286	TRNT1	100	96.774	Gorilla_gorilla
ENSCJAG00000015466	TRNT1	98	67.371	ENSHBUG00000002797	trnt1	99	67.371	Haplochromis_burtoni
ENSCJAG00000015466	TRNT1	99	86.175	ENSHGLG00000000221	-	99	86.175	Heterocephalus_glaber_female
ENSCJAG00000015466	TRNT1	99	91.686	ENSHGLG00000003649	TRNT1	99	91.686	Heterocephalus_glaber_female
ENSCJAG00000015466	TRNT1	99	90.531	ENSHGLG00100016421	TRNT1	99	90.531	Heterocephalus_glaber_male
ENSCJAG00000015466	TRNT1	94	66.995	ENSHCOG00000010618	trnt1	95	66.995	Hippocampus_comes
ENSCJAG00000015466	TRNT1	96	67.788	ENSIPUG00000000971	trnt1	97	67.788	Ictalurus_punctatus
ENSCJAG00000015466	TRNT1	100	88.710	ENSSTOG00000000150	TRNT1	98	92.079	Ictidomys_tridecemlineatus
ENSCJAG00000015466	TRNT1	100	92.166	ENSJJAG00000018561	Trnt1	99	92.166	Jaculus_jaculus
ENSCJAG00000015466	TRNT1	96	67.689	ENSKMAG00000011307	trnt1	99	67.689	Kryptolebias_marmoratus
ENSCJAG00000015466	TRNT1	94	63.391	ENSLBEG00000019457	trnt1	96	63.391	Labrus_bergylta
ENSCJAG00000015466	TRNT1	99	70.998	ENSLACG00000013227	TRNT1	99	70.998	Latimeria_chalumnae
ENSCJAG00000015466	TRNT1	99	69.037	ENSLOCG00000011105	trnt1	99	69.037	Lepisosteus_oculatus
ENSCJAG00000015466	TRNT1	100	94.009	ENSLAFG00000023191	TRNT1	100	94.009	Loxodonta_africana
ENSCJAG00000015466	TRNT1	99	96.767	ENSMFAG00000045113	TRNT1	99	96.767	Macaca_fascicularis
ENSCJAG00000015466	TRNT1	99	96.767	ENSMMUG00000017983	TRNT1	99	96.767	Macaca_mulatta
ENSCJAG00000015466	TRNT1	99	96.767	ENSMNEG00000037805	TRNT1	99	96.767	Macaca_nemestrina
ENSCJAG00000015466	TRNT1	88	97.120	ENSMLEG00000033671	TRNT1	99	97.120	Mandrillus_leucophaeus
ENSCJAG00000015466	TRNT1	98	67.294	ENSMAMG00000023401	trnt1	99	67.294	Mastacembelus_armatus
ENSCJAG00000015466	TRNT1	98	67.371	ENSMZEG00005009141	trnt1	99	67.371	Maylandia_zebra
ENSCJAG00000015466	TRNT1	74	75.389	ENSMGAG00000009971	TRNT1	100	75.389	Meleagris_gallopavo
ENSCJAG00000015466	TRNT1	100	91.935	ENSMAUG00000020707	Trnt1	100	91.935	Mesocricetus_auratus
ENSCJAG00000015466	TRNT1	100	92.627	ENSMICG00000016615	TRNT1	100	92.627	Microcebus_murinus
ENSCJAG00000015466	TRNT1	100	92.627	ENSMOCG00000004539	Trnt1	100	92.627	Microtus_ochrogaster
ENSCJAG00000015466	TRNT1	95	67.797	ENSMMOG00000010742	trnt1	97	67.797	Mola_mola
ENSCJAG00000015466	TRNT1	100	84.332	ENSMODG00000004368	TRNT1	100	84.332	Monodelphis_domestica
ENSCJAG00000015466	TRNT1	98	66.353	ENSMALG00000008376	trnt1	99	66.353	Monopterus_albus
ENSCJAG00000015466	TRNT1	100	92.166	MGP_CAROLIEiJ_G0028698	Trnt1	100	92.166	Mus_caroli
ENSCJAG00000015466	TRNT1	100	92.166	ENSMUSG00000013736	Trnt1	100	92.166	Mus_musculus
ENSCJAG00000015466	TRNT1	100	91.475	MGP_PahariEiJ_G0022449	Trnt1	100	91.475	Mus_pahari
ENSCJAG00000015466	TRNT1	100	92.627	MGP_SPRETEiJ_G0029726	Trnt1	100	92.627	Mus_spretus
ENSCJAG00000015466	TRNT1	100	92.396	ENSMPUG00000017017	TRNT1	99	92.396	Mustela_putorius_furo
ENSCJAG00000015466	TRNT1	89	87.565	ENSMLUG00000011864	TRNT1	100	87.565	Myotis_lucifugus
ENSCJAG00000015466	TRNT1	100	91.014	ENSNGAG00000000537	Trnt1	100	91.014	Nannospalax_galili
ENSCJAG00000015466	TRNT1	79	67.052	ENSNBRG00000023606	trnt1	99	67.052	Neolamprologus_brichardi
ENSCJAG00000015466	TRNT1	100	97.465	ENSNLEG00000003226	TRNT1	100	97.465	Nomascus_leucogenys
ENSCJAG00000015466	TRNT1	100	84.793	ENSMEUG00000004684	TRNT1	100	84.793	Notamacropus_eugenii
ENSCJAG00000015466	TRNT1	88	80.157	ENSOPRG00000015067	TRNT1	99	80.157	Ochotona_princeps
ENSCJAG00000015466	TRNT1	99	91.686	ENSODEG00000007597	TRNT1	99	91.686	Octodon_degus
ENSCJAG00000015466	TRNT1	98	67.840	ENSONIG00000020273	trnt1	98	67.840	Oreochromis_niloticus
ENSCJAG00000015466	TRNT1	99	75.231	ENSOANG00000007514	TRNT1	99	75.231	Ornithorhynchus_anatinus
ENSCJAG00000015466	TRNT1	100	85.253	ENSOCUG00000008580	TRNT1	99	85.253	Oryctolagus_cuniculus
ENSCJAG00000015466	TRNT1	96	66.427	ENSORLG00000003165	trnt1	98	66.427	Oryzias_latipes
ENSCJAG00000015466	TRNT1	96	66.667	ENSORLG00020022060	trnt1	98	66.667	Oryzias_latipes_hni
ENSCJAG00000015466	TRNT1	98	64.941	ENSORLG00015018915	trnt1	99	64.941	Oryzias_latipes_hsok
ENSCJAG00000015466	TRNT1	95	65.291	ENSOMEG00000003331	trnt1	97	65.291	Oryzias_melastigma
ENSCJAG00000015466	TRNT1	100	91.244	ENSOARG00000008631	TRNT1	99	91.244	Ovis_aries
ENSCJAG00000015466	TRNT1	100	96.774	ENSPPAG00000043566	TRNT1	100	96.774	Pan_paniscus
ENSCJAG00000015466	TRNT1	99	92.379	ENSPPRG00000001327	TRNT1	99	92.379	Panthera_pardus
ENSCJAG00000015466	TRNT1	100	91.935	ENSPTIG00000011448	TRNT1	99	91.935	Panthera_tigris_altaica
ENSCJAG00000015466	TRNT1	100	96.774	ENSPTRG00000014564	TRNT1	100	96.774	Pan_troglodytes
ENSCJAG00000015466	TRNT1	99	96.536	ENSPANG00000025944	TRNT1	99	96.536	Papio_anubis
ENSCJAG00000015466	TRNT1	97	69.359	ENSPKIG00000020015	trnt1	97	69.359	Paramormyrops_kingsleyae
ENSCJAG00000015466	TRNT1	91	80.605	ENSPSIG00000017356	TRNT1	99	82.222	Pelodiscus_sinensis
ENSCJAG00000015466	TRNT1	98	66.353	ENSPMGG00000008888	trnt1	98	66.353	Periophthalmus_magnuspinnatus
ENSCJAG00000015466	TRNT1	100	92.627	ENSPEMG00000019845	Trnt1	100	92.627	Peromyscus_maniculatus_bairdii
ENSCJAG00000015466	TRNT1	100	84.562	ENSPCIG00000030436	TRNT1	100	84.562	Phascolarctos_cinereus
ENSCJAG00000015466	TRNT1	94	68.966	ENSPFOG00000006194	trnt1	95	68.966	Poecilia_formosa
ENSCJAG00000015466	TRNT1	94	68.966	ENSPLAG00000015623	trnt1	99	68.734	Poecilia_latipinna
ENSCJAG00000015466	TRNT1	94	68.966	ENSPMEG00000012216	trnt1	99	68.734	Poecilia_mexicana
ENSCJAG00000015466	TRNT1	96	66.903	ENSPREG00000021470	trnt1	96	68.293	Poecilia_reticulata
ENSCJAG00000015466	TRNT1	100	97.005	ENSPPYG00000013702	TRNT1	100	97.005	Pongo_abelii
ENSCJAG00000015466	TRNT1	88	92.167	ENSPCAG00000001951	TRNT1	100	92.167	Procavia_capensis
ENSCJAG00000015466	TRNT1	100	94.009	ENSPCOG00000022228	TRNT1	100	94.009	Propithecus_coquereli
ENSCJAG00000015466	TRNT1	88	91.927	ENSPVAG00000008784	TRNT1	100	91.927	Pteropus_vampyrus
ENSCJAG00000015466	TRNT1	98	67.371	ENSPNYG00000003120	trnt1	99	67.371	Pundamilia_nyererei
ENSCJAG00000015466	TRNT1	98	66.977	ENSPNAG00000000565	trnt1	99	66.977	Pygocentrus_nattereri
ENSCJAG00000015466	TRNT1	100	92.396	ENSRNOG00000006432	Trnt1	100	92.396	Rattus_norvegicus
ENSCJAG00000015466	TRNT1	100	94.009	ENSRBIG00000042632	TRNT1	100	94.009	Rhinopithecus_bieti
ENSCJAG00000015466	TRNT1	100	96.313	ENSRROG00000036866	TRNT1	100	96.313	Rhinopithecus_roxellana
ENSCJAG00000015466	TRNT1	100	99.078	ENSSBOG00000021208	TRNT1	100	99.078	Saimiri_boliviensis_boliviensis
ENSCJAG00000015466	TRNT1	100	84.332	ENSSHAG00000018861	TRNT1	100	84.332	Sarcophilus_harrisii
ENSCJAG00000015466	TRNT1	99	67.512	ENSSFOG00015020844	trnt1	94	70.617	Scleropages_formosus
ENSCJAG00000015466	TRNT1	96	67.952	ENSSMAG00000015432	trnt1	95	67.952	Scophthalmus_maximus
ENSCJAG00000015466	TRNT1	94	68.719	ENSSDUG00000012320	trnt1	95	68.719	Seriola_dumerili
ENSCJAG00000015466	TRNT1	56	63.900	ENSSLDG00000016463	-	96	61.660	Seriola_lalandi_dorsalis
ENSCJAG00000015466	TRNT1	94	68.719	ENSSLDG00000009325	trnt1	95	68.719	Seriola_lalandi_dorsalis
ENSCJAG00000015466	TRNT1	88	81.771	ENSSPUG00000014153	TRNT1	100	81.771	Sphenodon_punctatus
ENSCJAG00000015466	TRNT1	98	66.118	ENSSPAG00000021005	trnt1	99	66.118	Stegastes_partitus
ENSCJAG00000015466	TRNT1	100	93.088	ENSSSCG00000011529	TRNT1	100	93.088	Sus_scrofa
ENSCJAG00000015466	TRNT1	93	75.062	ENSTGUG00000010192	TRNT1	99	75.062	Taeniopygia_guttata
ENSCJAG00000015466	TRNT1	98	67.529	ENSTRUG00000001088	trnt1	99	67.529	Takifugu_rubripes
ENSCJAG00000015466	TRNT1	99	67.130	ENSTNIG00000007363	trnt1	98	67.130	Tetraodon_nigroviridis
ENSCJAG00000015466	TRNT1	70	78.652	ENSTBEG00000006367	TRNT1	100	78.652	Tupaia_belangeri
ENSCJAG00000015466	TRNT1	100	91.475	ENSTTRG00000007803	TRNT1	100	91.475	Tursiops_truncatus
ENSCJAG00000015466	TRNT1	100	91.705	ENSUAMG00000022574	TRNT1	99	91.705	Ursus_americanus
ENSCJAG00000015466	TRNT1	100	92.166	ENSUMAG00000024092	TRNT1	99	92.166	Ursus_maritimus
ENSCJAG00000015466	TRNT1	100	91.935	ENSVVUG00000012810	TRNT1	99	91.935	Vulpes_vulpes
ENSCJAG00000015466	TRNT1	95	64.423	ENSXETG00000025091	trnt1	99	65.423	Xenopus_tropicalis
ENSCJAG00000015466	TRNT1	94	69.212	ENSXCOG00000010150	trnt1	96	69.212	Xiphophorus_couchianus
ENSCJAG00000015466	TRNT1	94	68.719	ENSXMAG00000002227	trnt1	96	68.719	Xiphophorus_maculatus