EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000015468 (Gene tree)
Gene ID: -
Gene Symbol: RAB12
Alias: -
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 28871 bases
Position: chrNTIC01003335.1:48335774-48364644
Accession: 31332
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000028483	MMR_HSR1	PF01926.23	6.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000030098	RAB12-201	2270	-	ENSCJAP00000028483	340 (aa)	-	F6UH25

Gene Model

Click here to download ENSCJAG00000015468's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000015468's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000015468	RAB12	54	45.161	ENSCJAG00000019696	RAB15	90	49.533
ENSCJAG00000015468	RAB12	50	40.588	ENSCJAG00000007715	RAB25	80	40.606
ENSCJAG00000015468	RAB12	53	47.222	ENSCJAG00000041773	RAB30	88	47.222
ENSCJAG00000015468	RAB12	58	40.102	ENSCJAG00000008981	RAB2B	77	45.238
ENSCJAG00000015468	RAB12	50	50.296	ENSCJAG00000046275	RAB1A	85	50.000
ENSCJAG00000015468	RAB12	50	45.614	ENSCJAG00000008955	RAB35	84	45.614
ENSCJAG00000015468	RAB12	51	51.744	ENSCJAG00000009933	-	84	51.744
ENSCJAG00000015468	RAB12	55	36.316	ENSCJAG00000017521	RAB7A	91	35.000
ENSCJAG00000015468	RAB12	53	37.989	ENSCJAG00000048394	RAB5A	81	37.989
ENSCJAG00000015468	RAB12	60	35.849	ENSCJAG00000010778	RAB11B	88	43.671
ENSCJAG00000015468	RAB12	52	34.807	ENSCJAG00000010247	RAB23	75	34.807
ENSCJAG00000015468	RAB12	53	36.313	ENSCJAG00000041780	RAB5B	81	34.783
ENSCJAG00000015468	RAB12	51	40.462	ENSCJAG00000042020	RAB14	80	40.462
ENSCJAG00000015468	RAB12	50	49.708	ENSCJAG00000001599	-	84	49.708
ENSCJAG00000015468	RAB12	50	49.112	ENSCJAG00000047933	-	84	49.112
ENSCJAG00000015468	RAB12	58	36.318	ENSCJAG00000040200	RAB33B	83	37.949
ENSCJAG00000015468	RAB12	60	37.799	ENSCJAG00000042037	RAB11A	77	41.916

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000015468	RAB12	100	96.491	ENSG00000206418	RAB12	100	99.592	Homo_sapiens
ENSCJAG00000015468	RAB12	65	91.892	ENSAMEG00000007452	RAB12	96	91.892	Ailuropoda_melanoleuca
ENSCJAG00000015468	RAB12	72	83.806	ENSACIG00000020616	rab12	93	84.211	Amphilophus_citrinellus
ENSCJAG00000015468	RAB12	72	84.490	ENSAOCG00000002130	rab12	93	84.956	Amphiprion_ocellaris
ENSCJAG00000015468	RAB12	72	84.490	ENSAPEG00000013255	rab12	93	84.956	Amphiprion_percula
ENSCJAG00000015468	RAB12	72	84.898	ENSATEG00000019683	rab12	93	85.398	Anabas_testudineus
ENSCJAG00000015468	RAB12	65	96.833	ENSACAG00000003360	RAB12	87	96.429	Anolis_carolinensis
ENSCJAG00000015468	RAB12	72	84.082	ENSACLG00000007696	rab12	93	84.513	Astatotilapia_calliptera
ENSCJAG00000015468	RAB12	72	82.329	ENSAMXG00000004882	rab12	83	86.829	Astyanax_mexicanus
ENSCJAG00000015468	RAB12	72	96.735	ENSBTAG00000010356	RAB12	100	96.735	Bos_taurus
ENSCJAG00000015468	RAB12	75	98.039	ENSCAFG00020023721	RAB12	100	81.176	Canis_lupus_dingo
ENSCJAG00000015468	RAB12	72	96.735	ENSCHIG00000016103	RAB12	100	96.735	Capra_hircus
ENSCJAG00000015468	RAB12	62	97.619	ENSCPOG00000022689	RAB12	100	97.619	Cavia_porcellus
ENSCJAG00000015468	RAB12	72	100.000	ENSCCAG00000022862	RAB12	100	100.000	Cebus_capucinus
ENSCJAG00000015468	RAB12	69	100.000	ENSCATG00000037784	RAB12	97	100.000	Cercocebus_atys
ENSCJAG00000015468	RAB12	100	93.948	ENSCSAG00000017569	RAB12	100	93.372	Chlorocebus_sabaeus
ENSCJAG00000015468	RAB12	72	93.469	ENSCPBG00000028375	RAB12	100	93.469	Chrysemys_picta_bellii
ENSCJAG00000015468	RAB12	65	100.000	ENSCANG00000031453	RAB12	100	100.000	Colobus_angolensis_palliatus
ENSCJAG00000015468	RAB12	81	90.511	ENSCGRG00001006958	Rab12	100	75.731	Cricetulus_griseus_chok1gshd
ENSCJAG00000015468	RAB12	72	83.673	ENSCSEG00000016933	rab12	93	84.071	Cynoglossus_semilaevis
ENSCJAG00000015468	RAB12	66	87.444	ENSCVAG00000003539	rab12	93	81.739	Cyprinodon_variegatus
ENSCJAG00000015468	RAB12	72	82.857	ENSDARG00000089428	rab12	93	82.743	Danio_rerio
ENSCJAG00000015468	RAB12	100	84.412	ENSDNOG00000046064	RAB12	73	84.706	Dasypus_novemcinctus
ENSCJAG00000015468	RAB12	67	98.238	ENSDORG00000008920	Rab12	100	98.238	Dipodomys_ordii
ENSCJAG00000015468	RAB12	53	69.832	ENSEBUG00000006581	rab12	92	66.321	Eptatretus_burgeri
ENSCJAG00000015468	RAB12	75	97.244	ENSEASG00005002926	RAB12	100	81.471	Equus_asinus_asinus
ENSCJAG00000015468	RAB12	100	91.884	ENSECAG00000007384	RAB12	100	90.435	Equus_caballus
ENSCJAG00000015468	RAB12	72	82.449	ENSELUG00000007123	rab12	93	83.186	Esox_lucius
ENSCJAG00000015468	RAB12	100	93.842	ENSFCAG00000027710	RAB12	100	91.789	Felis_catus
ENSCJAG00000015468	RAB12	64	87.215	ENSFHEG00000004319	rab12	93	81.659	Fundulus_heteroclitus
ENSCJAG00000015468	RAB12	61	85.167	ENSGMOG00000012335	rab12	87	85.167	Gadus_morhua
ENSCJAG00000015468	RAB12	72	93.600	ENSGALG00000033608	RAB12	100	91.200	Gallus_gallus
ENSCJAG00000015468	RAB12	66	81.614	ENSGACG00000016639	rab12	100	81.614	Gasterosteus_aculeatus
ENSCJAG00000015468	RAB12	72	93.469	ENSGAGG00000007278	RAB12	100	93.469	Gopherus_agassizii
ENSCJAG00000015468	RAB12	72	84.082	ENSHBUG00000008497	rab12	93	84.513	Haplochromis_burtoni
ENSCJAG00000015468	RAB12	72	85.246	ENSHGLG00000006189	RAB12	90	88.525	Heterocephalus_glaber_female
ENSCJAG00000015468	RAB12	72	81.707	ENSHCOG00000012376	rab12	93	81.057	Hippocampus_comes
ENSCJAG00000015468	RAB12	66	85.841	ENSIPUG00000017401	rab12	84	86.829	Ictalurus_punctatus
ENSCJAG00000015468	RAB12	67	96.916	ENSSTOG00000025122	RAB12	100	96.916	Ictidomys_tridecemlineatus
ENSCJAG00000015468	RAB12	67	100.000	ENSJJAG00000019064	Rab12	100	100.000	Jaculus_jaculus
ENSCJAG00000015468	RAB12	72	80.816	ENSKMAG00000020056	rab12	93	81.416	Kryptolebias_marmoratus
ENSCJAG00000015468	RAB12	72	84.898	ENSLBEG00000013756	rab12	93	85.398	Labrus_bergylta
ENSCJAG00000015468	RAB12	74	83.529	ENSLACG00000010461	RAB12	90	90.625	Latimeria_chalumnae
ENSCJAG00000015468	RAB12	72	85.887	ENSLOCG00000002680	rab12	100	85.887	Lepisosteus_oculatus
ENSCJAG00000015468	RAB12	72	99.187	ENSMFAG00000043551	RAB12	100	99.187	Macaca_fascicularis
ENSCJAG00000015468	RAB12	69	100.000	ENSMNEG00000040853	RAB12	92	100.000	Macaca_nemestrina
ENSCJAG00000015468	RAB12	72	84.490	ENSMAMG00000006862	rab12	93	84.956	Mastacembelus_armatus
ENSCJAG00000015468	RAB12	72	84.082	ENSMZEG00005024316	rab12	93	84.513	Maylandia_zebra
ENSCJAG00000015468	RAB12	60	98.529	ENSMGAG00000009197	RAB12	100	98.529	Meleagris_gallopavo
ENSCJAG00000015468	RAB12	81	90.876	ENSMAUG00000008371	Rab12	100	75.731	Mesocricetus_auratus
ENSCJAG00000015468	RAB12	71	98.750	ENSMICG00000030661	RAB12	100	97.490	Microcebus_murinus
ENSCJAG00000015468	RAB12	64	98.174	ENSMOCG00000000452	Rab12	100	98.174	Microtus_ochrogaster
ENSCJAG00000015468	RAB12	100	83.430	ENSMODG00000021452	RAB12	100	82.558	Monodelphis_domestica
ENSCJAG00000015468	RAB12	72	82.449	ENSMALG00000015762	rab12	93	83.628	Monopterus_albus
ENSCJAG00000015468	RAB12	100	80.294	MGP_CAROLIEiJ_G0021839	Rab12	86	94.444	Mus_caroli
ENSCJAG00000015468	RAB12	100	80.294	ENSMUSG00000023460	Rab12	100	95.510	Mus_musculus
ENSCJAG00000015468	RAB12	100	80.294	MGP_PahariEiJ_G0020826	Rab12	100	95.510	Mus_pahari
ENSCJAG00000015468	RAB12	100	80.588	MGP_SPRETEiJ_G0022750	Rab12	86	94.444	Mus_spretus
ENSCJAG00000015468	RAB12	72	97.959	ENSMLUG00000002883	RAB12	100	97.959	Myotis_lucifugus
ENSCJAG00000015468	RAB12	72	86.531	ENSNGAG00000019722	-	100	86.531	Nannospalax_galili
ENSCJAG00000015468	RAB12	69	97.425	ENSNGAG00000024103	-	99	97.425	Nannospalax_galili
ENSCJAG00000015468	RAB12	72	84.082	ENSNBRG00000014428	rab12	93	84.513	Neolamprologus_brichardi
ENSCJAG00000015468	RAB12	72	99.184	ENSNLEG00000006939	RAB12	100	99.184	Nomascus_leucogenys
ENSCJAG00000015468	RAB12	72	96.341	ENSMEUG00000000493	RAB12	100	96.341	Notamacropus_eugenii
ENSCJAG00000015468	RAB12	64	97.717	ENSODEG00000006414	RAB12	100	97.717	Octodon_degus
ENSCJAG00000015468	RAB12	72	84.082	ENSONIG00000018469	rab12	93	84.513	Oreochromis_niloticus
ENSCJAG00000015468	RAB12	72	84.490	ENSORLG00000003902	rab12	93	84.956	Oryzias_latipes
ENSCJAG00000015468	RAB12	72	84.490	ENSORLG00020005131	rab12	93	84.956	Oryzias_latipes_hni
ENSCJAG00000015468	RAB12	72	84.082	ENSORLG00015007869	rab12	93	84.513	Oryzias_latipes_hsok
ENSCJAG00000015468	RAB12	72	84.490	ENSOMEG00000008191	rab12	93	84.956	Oryzias_melastigma
ENSCJAG00000015468	RAB12	62	99.524	ENSOGAG00000028002	RAB12	99	99.524	Otolemur_garnettii
ENSCJAG00000015468	RAB12	62	97.619	ENSOARG00000000728	RAB12	92	94.619	Ovis_aries
ENSCJAG00000015468	RAB12	61	100.000	ENSPPAG00000009152	RAB12	97	100.000	Pan_paniscus
ENSCJAG00000015468	RAB12	72	98.776	ENSPPRG00000024521	RAB12	100	98.776	Panthera_pardus
ENSCJAG00000015468	RAB12	72	99.592	ENSPTRG00000009853	RAB12	100	99.592	Pan_troglodytes
ENSCJAG00000015468	RAB12	72	98.381	ENSPANG00000009320	RAB12	100	98.381	Papio_anubis
ENSCJAG00000015468	RAB12	56	90.526	ENSPKIG00000008579	rab12	93	84.956	Paramormyrops_kingsleyae
ENSCJAG00000015468	RAB12	72	81.633	ENSPMGG00000001890	rab12	93	82.743	Periophthalmus_magnuspinnatus
ENSCJAG00000015468	RAB12	81	91.336	ENSPEMG00000021032	Rab12	86	94.841	Peromyscus_maniculatus_bairdii
ENSCJAG00000015468	RAB12	100	85.756	ENSPCIG00000010453	RAB12	85	83.721	Phascolarctos_cinereus
ENSCJAG00000015468	RAB12	72	82.186	ENSPFOG00000001579	rab12	93	82.018	Poecilia_formosa
ENSCJAG00000015468	RAB12	72	82.186	ENSPLAG00000013594	rab12	93	82.018	Poecilia_latipinna
ENSCJAG00000015468	RAB12	72	82.186	ENSPMEG00000010417	rab12	93	82.018	Poecilia_mexicana
ENSCJAG00000015468	RAB12	72	82.186	ENSPREG00000017487	rab12	93	82.018	Poecilia_reticulata
ENSCJAG00000015468	RAB12	100	96.491	ENSPPYG00000009015	-	100	96.491	Pongo_abelii
ENSCJAG00000015468	RAB12	72	98.367	ENSPCAG00000015007	RAB12	100	98.367	Procavia_capensis
ENSCJAG00000015468	RAB12	72	99.184	ENSPCOG00000019816	RAB12	100	99.184	Propithecus_coquereli
ENSCJAG00000015468	RAB12	72	98.776	ENSPVAG00000002757	RAB12	100	98.776	Pteropus_vampyrus
ENSCJAG00000015468	RAB12	72	84.082	ENSPNYG00000023905	rab12	93	84.513	Pundamilia_nyererei
ENSCJAG00000015468	RAB12	72	84.082	ENSPNYG00000005654	rab12	93	84.513	Pundamilia_nyererei
ENSCJAG00000015468	RAB12	66	87.500	ENSPNAG00000015031	rab12	83	88.293	Pygocentrus_nattereri
ENSCJAG00000015468	RAB12	72	88.710	ENSRNOG00000019295	Rab12	100	88.306	Rattus_norvegicus
ENSCJAG00000015468	RAB12	69	100.000	ENSRBIG00000028760	RAB12	100	100.000	Rhinopithecus_bieti
ENSCJAG00000015468	RAB12	67	100.000	ENSRROG00000019249	RAB12	95	100.000	Rhinopithecus_roxellana
ENSCJAG00000015468	RAB12	62	98.585	ENSSBOG00000021125	RAB12	80	99.522	Saimiri_boliviensis_boliviensis
ENSCJAG00000015468	RAB12	66	94.690	ENSSHAG00000001489	RAB12	100	94.248	Sarcophilus_harrisii
ENSCJAG00000015468	RAB12	72	83.673	ENSSMAG00000012678	rab12	93	84.071	Scophthalmus_maximus
ENSCJAG00000015468	RAB12	72	84.898	ENSSDUG00000008505	rab12	93	85.398	Seriola_dumerili
ENSCJAG00000015468	RAB12	72	84.898	ENSSLDG00000022239	rab12	93	85.398	Seriola_lalandi_dorsalis
ENSCJAG00000015468	RAB12	72	93.902	ENSSPUG00000003222	RAB12	100	93.902	Sphenodon_punctatus
ENSCJAG00000015468	RAB12	72	84.082	ENSSPAG00000010822	rab12	93	84.513	Stegastes_partitus
ENSCJAG00000015468	RAB12	72	96.735	ENSSSCG00000038026	RAB12	100	96.735	Sus_scrofa
ENSCJAG00000015468	RAB12	72	93.600	ENSTGUG00000009889	RAB12	100	92.400	Taeniopygia_guttata
ENSCJAG00000015468	RAB12	72	82.449	ENSTRUG00000024455	rab12	84	87.805	Takifugu_rubripes
ENSCJAG00000015468	RAB12	72	82.449	ENSTNIG00000014859	rab12	93	82.743	Tetraodon_nigroviridis
ENSCJAG00000015468	RAB12	65	97.748	ENSTTRG00000008711	RAB12	100	97.748	Tursiops_truncatus
ENSCJAG00000015468	RAB12	72	99.184	ENSUAMG00000018092	RAB12	100	99.184	Ursus_americanus
ENSCJAG00000015468	RAB12	64	99.087	ENSVVUG00000011748	RAB12	99	99.087	Vulpes_vulpes
ENSCJAG00000015468	RAB12	87	76.589	ENSXETG00000004289	rab12	81	86.561	Xenopus_tropicalis
ENSCJAG00000015468	RAB12	72	82.186	ENSXCOG00000019310	rab12	93	82.456	Xiphophorus_couchianus
ENSCJAG00000015468	RAB12	72	82.591	ENSXMAG00000023617	rab12	93	82.456	Xiphophorus_maculatus