EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000015567 (Gene tree)
Gene ID: 100388771
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 35429 bases
Position: chrNTIC01007779.1:754485-789913
Accession: 30129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000028694	POP1	PF06978.11	6.5e-37	1	2
ENSCJAP00000028694	POP1	PF06978.11	6.5e-37	2	2
ENSCJAP00000028694	POPLD	PF08170.12	1.7e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000030321	POP1-201	3042	-	ENSCJAP00000028694	1013 (aa)	-	F6UEY1

Gene Model

Click here to download ENSCJAG00000015567's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc03008	Ribosome biogenesis in eukaryotes	KEGG
cjc03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000015567's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000015567	POP1	100	93.066	ENSG00000104356	POP1	100	93.066	Homo_sapiens
ENSCJAG00000015567	POP1	100	47.755	ENSAPOG00000008198	pop1	100	47.755	Acanthochromis_polyacanthus
ENSCJAG00000015567	POP1	100	79.223	ENSAMEG00000000556	POP1	100	79.223	Ailuropoda_melanoleuca
ENSCJAG00000015567	POP1	91	49.364	ENSACIG00000004169	POP1	100	46.679	Amphilophus_citrinellus
ENSCJAG00000015567	POP1	100	47.393	ENSAOCG00000010991	pop1	100	47.488	Amphiprion_ocellaris
ENSCJAG00000015567	POP1	100	45.177	ENSAPEG00000007607	pop1	100	45.654	Amphiprion_percula
ENSCJAG00000015567	POP1	100	47.020	ENSATEG00000024814	POP1	100	47.003	Anabas_testudineus
ENSCJAG00000015567	POP1	93	62.526	ENSAPLG00000014418	POP1	100	62.526	Anas_platyrhynchos
ENSCJAG00000015567	POP1	99	56.176	ENSACAG00000016083	POP1	100	56.286	Anolis_carolinensis
ENSCJAG00000015567	POP1	89	97.239	ENSANAG00000026360	POP1	100	97.239	Aotus_nancymaae
ENSCJAG00000015567	POP1	93	53.061	ENSACLG00000010951	pop1	100	47.453	Astatotilapia_calliptera
ENSCJAG00000015567	POP1	100	46.039	ENSAMXG00000014483	POP1	91	70.886	Astyanax_mexicanus
ENSCJAG00000015567	POP1	100	79.374	ENSBTAG00000012596	POP1	100	79.277	Bos_taurus
ENSCJAG00000015567	POP1	100	79.395	ENSCAFG00000000469	POP1	100	79.395	Canis_familiaris
ENSCJAG00000015567	POP1	100	80.566	ENSCAFG00020026765	POP1	100	80.566	Canis_lupus_dingo
ENSCJAG00000015567	POP1	100	79.199	ENSCHIG00000017066	POP1	100	79.004	Capra_hircus
ENSCJAG00000015567	POP1	100	84.570	ENSTSYG00000003097	POP1	100	84.863	Carlito_syrichta
ENSCJAG00000015567	POP1	100	76.288	ENSCAPG00000007251	POP1	100	76.288	Cavia_aperea
ENSCJAG00000015567	POP1	100	79.297	ENSCPOG00000002901	POP1	100	79.297	Cavia_porcellus
ENSCJAG00000015567	POP1	100	96.150	ENSCCAG00000018939	POP1	100	96.150	Cebus_capucinus
ENSCJAG00000015567	POP1	100	92.480	ENSCATG00000040916	POP1	100	92.480	Cercocebus_atys
ENSCJAG00000015567	POP1	100	81.348	ENSCLAG00000007208	POP1	97	81.348	Chinchilla_lanigera
ENSCJAG00000015567	POP1	91	92.842	ENSCSAG00000012340	POP1	99	92.842	Chlorocebus_sabaeus
ENSCJAG00000015567	POP1	96	78.484	ENSCHOG00000011432	POP1	100	78.279	Choloepus_hoffmanni
ENSCJAG00000015567	POP1	100	64.591	ENSCPBG00000006373	POP1	100	64.591	Chrysemys_picta_bellii
ENSCJAG00000015567	POP1	83	38.132	ENSCING00000008323	-	90	36.749	Ciona_intestinalis
ENSCJAG00000015567	POP1	100	92.578	ENSCANG00000001647	POP1	100	92.578	Colobus_angolensis_palliatus
ENSCJAG00000015567	POP1	100	76.000	ENSCGRG00001017308	Pop1	100	75.684	Cricetulus_griseus_chok1gshd
ENSCJAG00000015567	POP1	100	70.341	ENSCGRG00000010824	Pop1	100	70.020	Cricetulus_griseus_crigri
ENSCJAG00000015567	POP1	100	46.169	ENSCSEG00000008737	POP1	100	46.161	Cynoglossus_semilaevis
ENSCJAG00000015567	POP1	100	48.127	ENSCVAG00000022248	pop1	100	47.881	Cyprinodon_variegatus
ENSCJAG00000015567	POP1	51	45.489	ENSDARG00000102087	pop1	99	45.489	Danio_rerio
ENSCJAG00000015567	POP1	100	76.343	ENSDNOG00000019974	POP1	100	76.343	Dasypus_novemcinctus
ENSCJAG00000015567	POP1	100	71.345	ENSDORG00000015384	Pop1	100	70.760	Dipodomys_ordii
ENSCJAG00000015567	POP1	62	32.701	FBgn0026702	l(1)G0045	70	32.701	Drosophila_melanogaster
ENSCJAG00000015567	POP1	89	69.474	ENSETEG00000007839	POP1	88	69.474	Echinops_telfairi
ENSCJAG00000015567	POP1	50	42.857	ENSEBUG00000009897	pop1	96	42.857	Eptatretus_burgeri
ENSCJAG00000015567	POP1	100	82.520	ENSEASG00005003189	POP1	98	82.520	Equus_asinus_asinus
ENSCJAG00000015567	POP1	100	82.227	ENSECAG00000024236	POP1	100	82.227	Equus_caballus
ENSCJAG00000015567	POP1	68	77.778	ENSEEUG00000003050	-	70	77.778	Erinaceus_europaeus
ENSCJAG00000015567	POP1	100	47.889	ENSELUG00000003526	pop1	100	47.939	Esox_lucius
ENSCJAG00000015567	POP1	100	82.031	ENSFCAG00000002168	POP1	100	82.031	Felis_catus
ENSCJAG00000015567	POP1	100	61.035	ENSFALG00000005711	POP1	100	61.035	Ficedula_albicollis
ENSCJAG00000015567	POP1	100	81.055	ENSFDAG00000017068	POP1	100	81.055	Fukomys_damarensis
ENSCJAG00000015567	POP1	91	52.566	ENSFHEG00000019518	pop1	100	47.206	Fundulus_heteroclitus
ENSCJAG00000015567	POP1	93	46.598	ENSGMOG00000000659	POP1	97	46.701	Gadus_morhua
ENSCJAG00000015567	POP1	100	47.712	ENSGAFG00000019770	POP1	100	47.420	Gambusia_affinis
ENSCJAG00000015567	POP1	100	46.095	ENSGACG00000003499	pop1	100	46.000	Gasterosteus_aculeatus
ENSCJAG00000015567	POP1	100	63.356	ENSGAGG00000011737	POP1	98	63.707	Gopherus_agassizii
ENSCJAG00000015567	POP1	100	92.969	ENSGGOG00000003176	POP1	100	92.969	Gorilla_gorilla
ENSCJAG00000015567	POP1	100	47.424	ENSHBUG00000021583	pop1	100	47.228	Haplochromis_burtoni
ENSCJAG00000015567	POP1	100	79.688	ENSHGLG00000006029	POP1	100	79.688	Heterocephalus_glaber_female
ENSCJAG00000015567	POP1	100	79.688	ENSHGLG00100016879	POP1	100	79.688	Heterocephalus_glaber_male
ENSCJAG00000015567	POP1	100	46.933	ENSHCOG00000013888	pop1	100	46.933	Hippocampus_comes
ENSCJAG00000015567	POP1	100	46.989	ENSIPUG00000018336	pop1	91	62.651	Ictalurus_punctatus
ENSCJAG00000015567	POP1	100	81.738	ENSSTOG00000011455	POP1	97	81.738	Ictidomys_tridecemlineatus
ENSCJAG00000015567	POP1	100	77.441	ENSJJAG00000013325	Pop1	100	77.441	Jaculus_jaculus
ENSCJAG00000015567	POP1	100	47.053	ENSKMAG00000001346	POP1	100	47.536	Kryptolebias_marmoratus
ENSCJAG00000015567	POP1	100	46.064	ENSLBEG00000024457	POP1	100	45.862	Labrus_bergylta
ENSCJAG00000015567	POP1	94	56.539	ENSLACG00000012498	POP1	99	56.344	Latimeria_chalumnae
ENSCJAG00000015567	POP1	100	51.302	ENSLOCG00000009817	POP1	100	50.815	Lepisosteus_oculatus
ENSCJAG00000015567	POP1	100	81.712	ENSLAFG00000010770	POP1	100	81.907	Loxodonta_africana
ENSCJAG00000015567	POP1	100	92.578	ENSMFAG00000000347	POP1	100	92.578	Macaca_fascicularis
ENSCJAG00000015567	POP1	100	92.090	ENSMNEG00000036870	POP1	100	92.090	Macaca_nemestrina
ENSCJAG00000015567	POP1	100	92.285	ENSMLEG00000034986	POP1	100	92.285	Mandrillus_leucophaeus
ENSCJAG00000015567	POP1	100	46.762	ENSMAMG00000004040	pop1	100	47.323	Mastacembelus_armatus
ENSCJAG00000015567	POP1	100	47.619	ENSMZEG00005025448	pop1	100	47.233	Maylandia_zebra
ENSCJAG00000015567	POP1	100	57.769	ENSMGAG00000012167	POP1	100	58.381	Meleagris_gallopavo
ENSCJAG00000015567	POP1	100	75.512	ENSMAUG00000017537	Pop1	100	75.512	Mesocricetus_auratus
ENSCJAG00000015567	POP1	100	85.994	ENSMICG00000004361	POP1	100	86.288	Microcebus_murinus
ENSCJAG00000015567	POP1	100	74.414	ENSMOCG00000006356	Pop1	100	75.293	Microtus_ochrogaster
ENSCJAG00000015567	POP1	100	45.552	ENSMMOG00000018242	pop1	100	45.348	Mola_mola
ENSCJAG00000015567	POP1	100	69.149	ENSMODG00000006561	POP1	100	69.149	Monodelphis_domestica
ENSCJAG00000015567	POP1	100	47.303	ENSMALG00000012621	POP1	100	47.931	Monopterus_albus
ENSCJAG00000015567	POP1	100	75.781	MGP_CAROLIEiJ_G0019726	Pop1	100	75.781	Mus_caroli
ENSCJAG00000015567	POP1	100	76.270	ENSMUSG00000022325	Pop1	100	76.270	Mus_musculus
ENSCJAG00000015567	POP1	100	75.879	MGP_PahariEiJ_G0019735	Pop1	100	75.879	Mus_pahari
ENSCJAG00000015567	POP1	100	75.781	MGP_SPRETEiJ_G0020622	Pop1	100	75.781	Mus_spretus
ENSCJAG00000015567	POP1	100	80.934	ENSMPUG00000015250	POP1	100	80.058	Mustela_putorius_furo
ENSCJAG00000015567	POP1	100	75.731	ENSMLUG00000010204	POP1	100	75.536	Myotis_lucifugus
ENSCJAG00000015567	POP1	100	80.078	ENSNGAG00000001582	Pop1	100	80.273	Nannospalax_galili
ENSCJAG00000015567	POP1	90	48.339	ENSNBRG00000002356	pop1	94	48.301	Neolamprologus_brichardi
ENSCJAG00000015567	POP1	100	92.383	ENSNLEG00000002541	POP1	100	92.383	Nomascus_leucogenys
ENSCJAG00000015567	POP1	93	61.506	ENSMEUG00000003118	POP1	97	61.506	Notamacropus_eugenii
ENSCJAG00000015567	POP1	100	77.344	ENSOPRG00000007667	POP1	100	77.246	Ochotona_princeps
ENSCJAG00000015567	POP1	100	78.363	ENSODEG00000003984	POP1	100	78.363	Octodon_degus
ENSCJAG00000015567	POP1	100	48.138	ENSONIG00000016445	pop1	100	47.943	Oreochromis_niloticus
ENSCJAG00000015567	POP1	59	65.854	ENSOANG00000001278	-	94	66.463	Ornithorhynchus_anatinus
ENSCJAG00000015567	POP1	100	80.855	ENSOCUG00000017400	POP1	100	80.855	Oryctolagus_cuniculus
ENSCJAG00000015567	POP1	100	47.864	ENSORLG00000002839	pop1	100	47.864	Oryzias_latipes
ENSCJAG00000015567	POP1	91	49.840	ENSORLG00020022450	POP1	96	49.840	Oryzias_latipes_hni
ENSCJAG00000015567	POP1	100	47.826	ENSORLG00015012746	POP1	100	47.679	Oryzias_latipes_hsok
ENSCJAG00000015567	POP1	100	48.043	ENSOMEG00000006915	pop1	99	47.652	Oryzias_melastigma
ENSCJAG00000015567	POP1	100	83.398	ENSOGAG00000001466	POP1	100	83.398	Otolemur_garnettii
ENSCJAG00000015567	POP1	100	93.164	ENSPPAG00000018410	POP1	100	93.164	Pan_paniscus
ENSCJAG00000015567	POP1	100	81.951	ENSPPRG00000005002	POP1	100	81.951	Panthera_pardus
ENSCJAG00000015567	POP1	100	82.341	ENSPTIG00000016527	POP1	100	82.341	Panthera_tigris_altaica
ENSCJAG00000015567	POP1	100	93.359	ENSPTRG00000020458	POP1	100	93.359	Pan_troglodytes
ENSCJAG00000015567	POP1	100	91.992	ENSPANG00000009704	POP1	100	91.992	Papio_anubis
ENSCJAG00000015567	POP1	100	49.614	ENSPKIG00000016325	POP1	100	49.372	Paramormyrops_kingsleyae
ENSCJAG00000015567	POP1	100	62.888	ENSPSIG00000012343	POP1	100	62.791	Pelodiscus_sinensis
ENSCJAG00000015567	POP1	91	49.249	ENSPMGG00000022253	POP1	95	49.145	Periophthalmus_magnuspinnatus
ENSCJAG00000015567	POP1	99	74.928	ENSPEMG00000023633	Pop1	100	74.928	Peromyscus_maniculatus_bairdii
ENSCJAG00000015567	POP1	91	43.611	ENSPMAG00000003209	POP1	100	43.776	Petromyzon_marinus
ENSCJAG00000015567	POP1	100	67.343	ENSPCIG00000012216	POP1	100	67.343	Phascolarctos_cinereus
ENSCJAG00000015567	POP1	100	48.588	ENSPFOG00000012490	POP1	100	48.012	Poecilia_formosa
ENSCJAG00000015567	POP1	100	48.635	ENSPLAG00000004646	POP1	100	48.058	Poecilia_latipinna
ENSCJAG00000015567	POP1	100	48.740	ENSPMEG00000019592	POP1	100	48.166	Poecilia_mexicana
ENSCJAG00000015567	POP1	100	48.535	ENSPREG00000020951	POP1	100	48.094	Poecilia_reticulata
ENSCJAG00000015567	POP1	100	93.066	ENSPPYG00000018777	POP1	100	93.066	Pongo_abelii
ENSCJAG00000015567	POP1	100	75.512	ENSPCAG00000016662	POP1	100	74.634	Procavia_capensis
ENSCJAG00000015567	POP1	100	85.798	ENSPCOG00000019420	POP1	100	86.092	Propithecus_coquereli
ENSCJAG00000015567	POP1	100	80.390	ENSPVAG00000014468	POP1	100	80.390	Pteropus_vampyrus
ENSCJAG00000015567	POP1	90	48.335	ENSPNYG00000004476	pop1	100	46.072	Pundamilia_nyererei
ENSCJAG00000015567	POP1	100	45.622	ENSPNAG00000000265	pop1	100	43.594	Pygocentrus_nattereri
ENSCJAG00000015567	POP1	100	76.344	ENSRNOG00000005243	Pop1	100	76.344	Rattus_norvegicus
ENSCJAG00000015567	POP1	100	92.285	ENSRBIG00000007996	POP1	100	92.285	Rhinopithecus_bieti
ENSCJAG00000015567	POP1	100	92.480	ENSRROG00000012334	POP1	100	92.480	Rhinopithecus_roxellana
ENSCJAG00000015567	POP1	99	95.356	ENSSBOG00000020830	POP1	100	95.356	Saimiri_boliviensis_boliviensis
ENSCJAG00000015567	POP1	100	68.054	ENSSHAG00000000296	POP1	100	68.054	Sarcophilus_harrisii
ENSCJAG00000015567	POP1	100	49.084	ENSSFOG00015007429	pop1	99	48.552	Scleropages_formosus
ENSCJAG00000015567	POP1	85	53.918	ENSSMAG00000010467	POP1	97	48.438	Scophthalmus_maximus
ENSCJAG00000015567	POP1	100	46.756	ENSSDUG00000007817	POP1	100	47.243	Seriola_dumerili
ENSCJAG00000015567	POP1	100	46.869	ENSSLDG00000012565	POP1	100	47.533	Seriola_lalandi_dorsalis
ENSCJAG00000015567	POP1	100	58.778	ENSSPUG00000003550	-	100	59.148	Sphenodon_punctatus
ENSCJAG00000015567	POP1	100	47.512	ENSSPAG00000014955	pop1	100	47.271	Stegastes_partitus
ENSCJAG00000015567	POP1	100	79.863	ENSSSCG00000006078	POP1	100	79.863	Sus_scrofa
ENSCJAG00000015567	POP1	93	56.614	ENSTGUG00000012011	-	100	57.037	Taeniopygia_guttata
ENSCJAG00000015567	POP1	92	48.472	ENSTRUG00000010856	pop1	94	48.101	Takifugu_rubripes
ENSCJAG00000015567	POP1	94	47.764	ENSTNIG00000013297	pop1	99	48.315	Tetraodon_nigroviridis
ENSCJAG00000015567	POP1	96	80.041	ENSTBEG00000014214	POP1	100	80.041	Tupaia_belangeri
ENSCJAG00000015567	POP1	100	78.690	ENSTTRG00000016071	POP1	100	78.690	Tursiops_truncatus
ENSCJAG00000015567	POP1	99	77.569	ENSUAMG00000017309	POP1	100	77.569	Ursus_americanus
ENSCJAG00000015567	POP1	100	79.284	ENSUMAG00000016952	POP1	100	87.045	Ursus_maritimus
ENSCJAG00000015567	POP1	82	87.644	ENSVPAG00000008278	POP1	82	87.644	Vicugna_pacos
ENSCJAG00000015567	POP1	100	80.859	ENSVVUG00000010994	POP1	100	80.859	Vulpes_vulpes
ENSCJAG00000015567	POP1	100	43.145	ENSXCOG00000017043	POP1	100	43.298	Xiphophorus_couchianus
ENSCJAG00000015567	POP1	100	47.763	ENSXMAG00000002472	POP1	100	47.190	Xiphophorus_maculatus