EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000015815 (Gene tree)
Gene ID: 100391167
Gene Symbol: -
Alias: -
Full Name: pentatricopeptide repeat-containing protein 1%2C mitochondrial
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 14761 bases
Position: chrNTIC01011112.1:187270871-187285631
Accession: 100391167
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000029142	PPR	PF01535.20	5.6e-17	1	2
ENSCJAP00000029142	PPR	PF01535.20	5.6e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000030795	-	2593	-	ENSCJAP00000029142	699 (aa)	XP_008981438	F7IAC7

Gene Model

Click here to download ENSCJAG00000015815's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000015815's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000015815	-	100	88.905	ENSG00000106246	PTCD1	100	88.905	Homo_sapiens
ENSCJAG00000015815	-	100	88.905	ENSG00000248919	ATP5MF-PTCD1	93	88.905	Homo_sapiens
ENSCJAG00000015815	-	81	46.771	ENSAPOG00000010679	ptcd1	85	47.237	Acanthochromis_polyacanthus
ENSCJAG00000015815	-	100	76.934	ENSAMEG00000006224	-	93	76.793	Ailuropoda_melanoleuca
ENSCJAG00000015815	-	85	48.760	ENSACIG00000017861	ptcd1	85	48.675	Amphilophus_citrinellus
ENSCJAG00000015815	-	84	48.904	ENSAOCG00000020741	-	81	49.236	Amphiprion_ocellaris
ENSCJAG00000015815	-	80	48.142	ENSAOCG00000022617	ptcd1	81	48.485	Amphiprion_ocellaris
ENSCJAG00000015815	-	84	48.735	ENSAPEG00000022632	ptcd1	81	49.066	Amphiprion_percula
ENSCJAG00000015815	-	84	50.169	ENSATEG00000007016	ptcd1	80	50.169	Anabas_testudineus
ENSCJAG00000015815	-	85	60.531	ENSAPLG00000006862	-	93	60.531	Anas_platyrhynchos
ENSCJAG00000015815	-	100	54.278	ENSACAG00000012871	-	93	54.278	Anolis_carolinensis
ENSCJAG00000015815	-	98	95.906	ENSANAG00000035790	-	100	95.906	Aotus_nancymaae
ENSCJAG00000015815	-	84	48.986	ENSACLG00000002824	ptcd1	80	48.900	Astatotilapia_calliptera
ENSCJAG00000015815	-	89	46.769	ENSAMXG00000037292	ptcd1	91	46.615	Astyanax_mexicanus
ENSCJAG00000015815	-	100	77.447	ENSBTAG00000020440	-	87	77.447	Bos_taurus
ENSCJAG00000015815	-	100	76.271	ENSCAFG00000015055	-	93	76.130	Canis_familiaris
ENSCJAG00000015815	-	100	76.271	ENSCAFG00020014480	-	93	76.130	Canis_lupus_dingo
ENSCJAG00000015815	-	100	77.273	ENSCHIG00000027000	-	99	77.273	Capra_hircus
ENSCJAG00000015815	-	100	79.632	ENSTSYG00000029495	-	100	79.632	Carlito_syrichta
ENSCJAG00000015815	-	94	74.316	ENSCAPG00000014660	-	100	74.316	Cavia_aperea
ENSCJAG00000015815	-	100	73.475	ENSCPOG00000001780	-	100	73.475	Cavia_porcellus
ENSCJAG00000015815	-	100	94.722	ENSCCAG00000034025	-	100	94.722	Cebus_capucinus
ENSCJAG00000015815	-	100	88.920	ENSCATG00000040859	-	100	89.347	Cercocebus_atys
ENSCJAG00000015815	-	98	76.327	ENSCLAG00000006354	-	100	75.706	Chinchilla_lanigera
ENSCJAG00000015815	-	91	89.596	ENSCSAG00000017794	-	95	89.907	Chlorocebus_sabaeus
ENSCJAG00000015815	-	97	55.082	ENSCPBG00000020866	-	97	55.357	Chrysemys_picta_bellii
ENSCJAG00000015815	-	78	31.957	ENSCING00000007717	-	93	32.136	Ciona_intestinalis
ENSCJAG00000015815	-	100	88.068	ENSCANG00000023441	-	100	88.778	Colobus_angolensis_palliatus
ENSCJAG00000015815	-	100	72.766	ENSCGRG00001023686	Ptcd1	100	72.766	Cricetulus_griseus_chok1gshd
ENSCJAG00000015815	-	99	72.214	ENSCGRG00000015031	Ptcd1	100	72.214	Cricetulus_griseus_crigri
ENSCJAG00000015815	-	89	46.508	ENSCSEG00000002378	ptcd1	83	47.360	Cynoglossus_semilaevis
ENSCJAG00000015815	-	86	46.732	ENSCVAG00000003621	ptcd1	88	46.634	Cyprinodon_variegatus
ENSCJAG00000015815	-	84	47.746	ENSCVAG00000015826	ptcd1	81	47.651	Cyprinodon_variegatus
ENSCJAG00000015815	-	92	48.615	ENSDARG00000076176	ptcd1	87	50.492	Danio_rerio
ENSCJAG00000015815	-	100	73.625	ENSDNOG00000009957	-	100	74.684	Dasypus_novemcinctus
ENSCJAG00000015815	-	98	75.145	ENSDORG00000000740	Ptcd1	99	75.000	Dipodomys_ordii
ENSCJAG00000015815	-	86	41.985	ENSEBUG00000014515	ptcd1	99	41.837	Eptatretus_burgeri
ENSCJAG00000015815	-	100	79.635	ENSEASG00005002480	-	100	79.494	Equus_asinus_asinus
ENSCJAG00000015815	-	100	79.916	ENSECAG00000016617	-	100	79.775	Equus_caballus
ENSCJAG00000015815	-	84	48.237	ENSELUG00000016517	ptcd1	82	48.232	Esox_lucius
ENSCJAG00000015815	-	100	76.836	ENSFCAG00000015069	-	100	76.695	Felis_catus
ENSCJAG00000015815	-	94	56.259	ENSFALG00000013803	-	93	58.321	Ficedula_albicollis
ENSCJAG00000015815	-	100	74.823	ENSFDAG00000006393	-	100	74.682	Fukomys_damarensis
ENSCJAG00000015815	-	74	46.840	ENSFHEG00000012491	ptcd1	87	46.840	Fundulus_heteroclitus
ENSCJAG00000015815	-	83	47.924	ENSGMOG00000007639	ptcd1	91	47.924	Gadus_morhua
ENSCJAG00000015815	-	87	58.998	ENSGALG00000004711	-	94	57.500	Gallus_gallus
ENSCJAG00000015815	-	84	47.746	ENSGAFG00000013175	ptcd1	82	47.819	Gambusia_affinis
ENSCJAG00000015815	-	83	50.424	ENSGACG00000016607	ptcd1	89	50.424	Gasterosteus_aculeatus
ENSCJAG00000015815	-	92	53.789	ENSGAGG00000021832	-	100	53.938	Gopherus_agassizii
ENSCJAG00000015815	-	99	88.889	ENSGGOG00000015123	-	99	88.889	Gorilla_gorilla
ENSCJAG00000015815	-	84	48.818	ENSHBUG00000018275	ptcd1	80	48.731	Haplochromis_burtoni
ENSCJAG00000015815	-	100	75.706	ENSHGLG00000017621	-	100	75.565	Heterocephalus_glaber_female
ENSCJAG00000015815	-	100	75.706	ENSHGLG00100007218	-	100	75.565	Heterocephalus_glaber_male
ENSCJAG00000015815	-	84	48.211	ENSHCOG00000010784	ptcd1	82	48.459	Hippocampus_comes
ENSCJAG00000015815	-	100	74.719	ENSSTOG00000001682	-	100	74.579	Ictidomys_tridecemlineatus
ENSCJAG00000015815	-	100	72.766	ENSJJAG00000000319	Ptcd1	100	72.766	Jaculus_jaculus
ENSCJAG00000015815	-	83	47.782	ENSKMAG00000008708	ptcd1	80	47.692	Kryptolebias_marmoratus
ENSCJAG00000015815	-	89	46.603	ENSLBEG00000008061	ptcd1	80	48.649	Labrus_bergylta
ENSCJAG00000015815	-	88	58.615	ENSLACG00000011172	ptcd1	84	59.571	Latimeria_chalumnae
ENSCJAG00000015815	-	87	55.205	ENSLOCG00000004833	ptcd1	94	55.537	Lepisosteus_oculatus
ENSCJAG00000015815	-	100	70.112	ENSLAFG00000002588	-	100	71.388	Loxodonta_africana
ENSCJAG00000015815	-	100	88.920	ENSMFAG00000041324	-	100	89.347	Macaca_fascicularis
ENSCJAG00000015815	-	100	88.778	ENSMMUG00000030408	-	100	89.205	Macaca_mulatta
ENSCJAG00000015815	-	100	88.920	ENSMNEG00000043786	-	100	89.347	Macaca_nemestrina
ENSCJAG00000015815	-	100	68.421	ENSMLEG00000031179	-	100	70.697	Mandrillus_leucophaeus
ENSCJAG00000015815	-	84	51.684	ENSMAMG00000007623	ptcd1	80	51.525	Mastacembelus_armatus
ENSCJAG00000015815	-	84	48.986	ENSMZEG00005012722	ptcd1	80	48.900	Maylandia_zebra
ENSCJAG00000015815	-	99	56.429	ENSMGAG00000004211	-	92	56.571	Meleagris_gallopavo
ENSCJAG00000015815	-	100	78.420	ENSMICG00000017428	-	100	78.420	Microcebus_murinus
ENSCJAG00000015815	-	89	45.946	ENSMMOG00000020243	ptcd1	88	47.708	Mola_mola
ENSCJAG00000015815	-	99	58.152	ENSMODG00000001350	-	99	58.152	Monodelphis_domestica
ENSCJAG00000015815	-	84	50.000	ENSMALG00000018442	ptcd1	80	49.832	Monopterus_albus
ENSCJAG00000015815	-	99	74.425	MGP_CAROLIEiJ_G0028011	Ptcd1	99	74.425	Mus_caroli
ENSCJAG00000015815	-	99	74.138	ENSMUSG00000029624	Ptcd1	99	74.138	Mus_musculus
ENSCJAG00000015815	-	99	73.593	MGP_PahariEiJ_G0024580	Ptcd1	99	73.593	Mus_pahari
ENSCJAG00000015815	-	99	74.425	MGP_SPRETEiJ_G0029012	Ptcd1	99	74.425	Mus_spretus
ENSCJAG00000015815	-	100	75.035	ENSMPUG00000016518	-	100	75.843	Mustela_putorius_furo
ENSCJAG00000015815	-	100	79.494	ENSMLUG00000010994	-	94	79.635	Myotis_lucifugus
ENSCJAG00000015815	-	85	48.595	ENSNBRG00000010079	ptcd1	84	48.505	Neolamprologus_brichardi
ENSCJAG00000015815	-	100	90.182	ENSNLEG00000011060	-	100	90.182	Nomascus_leucogenys
ENSCJAG00000015815	-	97	62.878	ENSMEUG00000006930	-	99	62.878	Notamacropus_eugenii
ENSCJAG00000015815	-	90	76.047	ENSOPRG00000013647	-	90	76.047	Ochotona_princeps
ENSCJAG00000015815	-	84	47.804	ENSONIG00000003168	ptcd1	95	47.716	Oreochromis_niloticus
ENSCJAG00000015815	-	80	57.804	ENSOANG00000007728	-	73	58.087	Ornithorhynchus_anatinus
ENSCJAG00000015815	-	99	73.088	ENSOCUG00000010584	-	98	73.088	Oryctolagus_cuniculus
ENSCJAG00000015815	-	86	47.876	ENSORLG00000009275	ptcd1	85	47.947	Oryzias_latipes
ENSCJAG00000015815	-	86	47.876	ENSORLG00020000988	ptcd1	85	47.947	Oryzias_latipes_hni
ENSCJAG00000015815	-	85	47.463	ENSORLG00015010557	ptcd1	85	47.533	Oryzias_latipes_hsok
ENSCJAG00000015815	-	88	46.880	ENSOMEG00000020627	ptcd1	89	47.021	Oryzias_melastigma
ENSCJAG00000015815	-	99	76.681	ENSOGAG00000010877	-	100	76.538	Otolemur_garnettii
ENSCJAG00000015815	-	100	73.513	ENSOARG00000018676	-	100	73.513	Ovis_aries
ENSCJAG00000015815	-	100	88.762	ENSPPAG00000036024	-	100	88.762	Pan_paniscus
ENSCJAG00000015815	-	100	77.447	ENSPPRG00000003478	-	100	77.305	Panthera_pardus
ENSCJAG00000015815	-	100	88.762	ENSPTRG00000019452	-	100	88.762	Pan_troglodytes
ENSCJAG00000015815	-	100	89.062	ENSPANG00000016730	-	100	89.489	Papio_anubis
ENSCJAG00000015815	-	96	49.707	ENSPKIG00000014215	ptcd1	97	49.560	Paramormyrops_kingsleyae
ENSCJAG00000015815	-	85	58.182	ENSPSIG00000011184	-	100	59.008	Pelodiscus_sinensis
ENSCJAG00000015815	-	73	41.571	ENSPMAG00000009667	ptcd1	100	41.571	Petromyzon_marinus
ENSCJAG00000015815	-	89	64.486	ENSPCIG00000024778	-	99	58.491	Phascolarctos_cinereus
ENSCJAG00000015815	-	90	45.879	ENSPFOG00000004458	ptcd1	82	47.667	Poecilia_formosa
ENSCJAG00000015815	-	84	47.659	ENSPLAG00000011051	ptcd1	82	47.731	Poecilia_latipinna
ENSCJAG00000015815	-	90	45.723	ENSPMEG00000020547	ptcd1	86	45.723	Poecilia_mexicana
ENSCJAG00000015815	-	83	47.049	ENSPREG00000000059	ptcd1	82	46.891	Poecilia_reticulata
ENSCJAG00000015815	-	95	89.023	ENSPPYG00000017377	-	100	89.023	Pongo_abelii
ENSCJAG00000015815	-	82	76.056	ENSPCAG00000001852	-	88	76.056	Procavia_capensis
ENSCJAG00000015815	-	100	80.170	ENSPCOG00000018596	-	100	80.028	Propithecus_coquereli
ENSCJAG00000015815	-	67	88.000	ENSPVAG00000007529	-	72	88.000	Pteropus_vampyrus
ENSCJAG00000015815	-	84	48.480	ENSPNYG00000019993	ptcd1	80	48.393	Pundamilia_nyererei
ENSCJAG00000015815	-	87	51.461	ENSPNAG00000014931	ptcd1	90	50.316	Pygocentrus_nattereri
ENSCJAG00000015815	-	98	73.875	ENSRNOG00000000987	Ptcd1	98	73.730	Rattus_norvegicus
ENSCJAG00000015815	-	100	88.494	ENSRBIG00000043393	-	100	89.205	Rhinopithecus_bieti
ENSCJAG00000015815	-	100	88.210	ENSRROG00000036420	-	100	88.920	Rhinopithecus_roxellana
ENSCJAG00000015815	-	100	96.000	ENSSBOG00000024114	-	100	96.000	Saimiri_boliviensis_boliviensis
ENSCJAG00000015815	-	99	56.410	ENSSHAG00000011376	-	93	63.489	Sarcophilus_harrisii
ENSCJAG00000015815	-	86	53.623	ENSSFOG00015007909	ptcd1	82	53.883	Scleropages_formosus
ENSCJAG00000015815	-	84	48.061	ENSSMAG00000000218	ptcd1	93	47.360	Scophthalmus_maximus
ENSCJAG00000015815	-	87	47.267	ENSSDUG00000015671	ptcd1	86	47.249	Seriola_dumerili
ENSCJAG00000015815	-	87	48.006	ENSSLDG00000014261	ptcd1	86	47.994	Seriola_lalandi_dorsalis
ENSCJAG00000015815	-	97	53.857	ENSSPUG00000003540	-	97	54.408	Sphenodon_punctatus
ENSCJAG00000015815	-	84	50.333	ENSSPAG00000011049	ptcd1	80	50.252	Stegastes_partitus
ENSCJAG00000015815	-	93	78.560	ENSSSCG00000007622	-	99	78.163	Sus_scrofa
ENSCJAG00000015815	-	88	59.903	ENSTGUG00000007563	-	99	60.956	Taeniopygia_guttata
ENSCJAG00000015815	-	87	47.876	ENSTRUG00000013471	ptcd1	79	48.889	Takifugu_rubripes
ENSCJAG00000015815	-	91	47.214	ENSTNIG00000008271	ptcd1	83	49.492	Tetraodon_nigroviridis
ENSCJAG00000015815	-	100	75.634	ENSTBEG00000011021	-	100	75.493	Tupaia_belangeri
ENSCJAG00000015815	-	100	75.426	ENSTTRG00000003006	-	100	75.426	Tursiops_truncatus
ENSCJAG00000015815	-	100	76.934	ENSUAMG00000008049	-	100	76.793	Ursus_americanus
ENSCJAG00000015815	-	99	75.887	ENSVVUG00000008836	-	100	75.745	Vulpes_vulpes
ENSCJAG00000015815	-	88	51.530	ENSXETG00000009891	ptcd1	87	52.059	Xenopus_tropicalis
ENSCJAG00000015815	-	90	45.298	ENSXMAG00000015540	ptcd1	86	45.298	Xiphophorus_maculatus