EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000016032 (Gene tree)
Gene ID: 100409366
Gene Symbol: CASC3
Alias: BTZ|MLN51
Full Name: CASC3%2C exon junction complex subunit
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 31897 bases
Position: chrNTIC01034389.1:66371456-66403352
Accession: 17040
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000029512	Btz	PF09405.10	1.1e-23	1	1
ENSCJAP00000065747	Btz	PF09405.10	1.1e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000031187	CASC3-201	4978	-	ENSCJAP00000029512	702 (aa)	-	U3F3U6
ENSCJAT00000078883	CASC3-202	2100	-	ENSCJAP00000065747	699 (aa)	-	A0A2R8MVQ6

Gene Model

Click here to download ENSCJAG00000016032's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc03013	RNA transport	KEGG
cjc03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000016032's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000016032	CASC3	100	95.164	ENSG00000108349	CASC3	100	95.164	Homo_sapiens
ENSCJAG00000016032	CASC3	73	52.479	ENSAPOG00000008467	casc3	70	53.719	Acanthochromis_polyacanthus
ENSCJAG00000016032	CASC3	100	93.314	ENSAMEG00000007764	CASC3	100	93.314	Ailuropoda_melanoleuca
ENSCJAG00000016032	CASC3	78	50.000	ENSACIG00000000720	casc3	83	49.376	Amphilophus_citrinellus
ENSCJAG00000016032	CASC3	82	51.935	ENSAOCG00000016676	casc3	76	51.266	Amphiprion_ocellaris
ENSCJAG00000016032	CASC3	73	53.846	ENSAPEG00000006787	casc3	69	54.274	Amphiprion_percula
ENSCJAG00000016032	CASC3	74	56.466	ENSATEG00000017196	casc3	68	56.466	Anabas_testudineus
ENSCJAG00000016032	CASC3	91	70.706	ENSACAG00000002674	CASC3	99	65.750	Anolis_carolinensis
ENSCJAG00000016032	CASC3	99	85.384	ENSANAG00000034820	-	99	86.467	Aotus_nancymaae
ENSCJAG00000016032	CASC3	66	97.992	ENSANAG00000031954	-	100	97.992	Aotus_nancymaae
ENSCJAG00000016032	CASC3	100	91.607	ENSBTAG00000006250	CASC3	100	91.607	Bos_taurus
ENSCJAG00000016032	CASC3	100	93.457	ENSCAFG00000016141	CASC3	100	93.457	Canis_familiaris
ENSCJAG00000016032	CASC3	100	92.614	ENSCAFG00020018882	CASC3	100	94.059	Canis_lupus_dingo
ENSCJAG00000016032	CASC3	100	91.143	ENSCHIG00000006338	CASC3	100	91.143	Capra_hircus
ENSCJAG00000016032	CASC3	100	86.771	ENSTSYG00000002975	CASC3	100	86.771	Carlito_syrichta
ENSCJAG00000016032	CASC3	88	87.338	ENSCAPG00000010514	CASC3	100	87.338	Cavia_aperea
ENSCJAG00000016032	CASC3	100	86.771	ENSCPOG00000015139	CASC3	100	85.917	Cavia_porcellus
ENSCJAG00000016032	CASC3	100	96.591	ENSCCAG00000033620	CASC3	100	96.733	Cebus_capucinus
ENSCJAG00000016032	CASC3	100	95.739	ENSCATG00000033593	CASC3	100	95.739	Cercocebus_atys
ENSCJAG00000016032	CASC3	100	88.193	ENSCLAG00000013730	CASC3	100	87.767	Chinchilla_lanigera
ENSCJAG00000016032	CASC3	100	95.597	ENSCSAG00000002777	CASC3	100	95.597	Chlorocebus_sabaeus
ENSCJAG00000016032	CASC3	99	73.380	ENSCPBG00000004750	CASC3	95	76.490	Chrysemys_picta_bellii
ENSCJAG00000016032	CASC3	100	95.597	ENSCANG00000008814	CASC3	100	95.597	Colobus_angolensis_palliatus
ENSCJAG00000016032	CASC3	100	90.612	ENSCGRG00001014706	Casc3	100	90.469	Cricetulus_griseus_chok1gshd
ENSCJAG00000016032	CASC3	100	83.499	ENSCGRG00000001952	Casc3	96	90.209	Cricetulus_griseus_crigri
ENSCJAG00000016032	CASC3	65	68.531	ENSCSEG00000010047	casc3	57	64.375	Cynoglossus_semilaevis
ENSCJAG00000016032	CASC3	65	71.223	ENSCVAG00000014935	casc3	80	54.489	Cyprinodon_variegatus
ENSCJAG00000016032	CASC3	100	91.750	ENSDNOG00000017249	CASC3	96	91.750	Dasypus_novemcinctus
ENSCJAG00000016032	CASC3	100	83.642	ENSETEG00000013720	CASC3	100	82.788	Echinops_telfairi
ENSCJAG00000016032	CASC3	99	36.281	ENSEBUG00000010654	casc3	98	35.827	Eptatretus_burgeri
ENSCJAG00000016032	CASC3	100	91.761	ENSEASG00005002909	CASC3	100	93.770	Equus_asinus_asinus
ENSCJAG00000016032	CASC3	100	92.461	ENSECAG00000019947	CASC3	88	92.461	Equus_caballus
ENSCJAG00000016032	CASC3	73	86.719	ENSEEUG00000014253	CASC3	100	86.719	Erinaceus_europaeus
ENSCJAG00000016032	CASC3	82	57.453	ENSELUG00000015093	casc3	69	56.698	Esox_lucius
ENSCJAG00000016032	CASC3	100	93.172	ENSFCAG00000014998	CASC3	100	93.172	Felis_catus
ENSCJAG00000016032	CASC3	88	71.473	ENSFALG00000000412	CASC3	98	71.654	Ficedula_albicollis
ENSCJAG00000016032	CASC3	93	85.474	ENSFDAG00000020696	CASC3	99	85.471	Fukomys_damarensis
ENSCJAG00000016032	CASC3	74	55.411	ENSFHEG00000015793	casc3	76	52.189	Fundulus_heteroclitus
ENSCJAG00000016032	CASC3	90	74.371	ENSGALG00000031813	CASC3	99	69.318	Gallus_gallus
ENSCJAG00000016032	CASC3	75	50.382	ENSGAFG00000017148	casc3	68	48.000	Gambusia_affinis
ENSCJAG00000016032	CASC3	88	76.090	ENSGAGG00000008432	CASC3	94	76.090	Gopherus_agassizii
ENSCJAG00000016032	CASC3	100	94.879	ENSGGOG00000005067	CASC3	100	94.879	Gorilla_gorilla
ENSCJAG00000016032	CASC3	100	87.909	ENSHGLG00000012117	CASC3	100	87.909	Heterocephalus_glaber_female
ENSCJAG00000016032	CASC3	89	87.540	ENSHGLG00100002268	CASC3	99	87.520	Heterocephalus_glaber_male
ENSCJAG00000016032	CASC3	98	47.251	ENSIPUG00000002679	casc3	92	47.801	Ictalurus_punctatus
ENSCJAG00000016032	CASC3	100	91.750	ENSSTOG00000006374	CASC3	100	91.750	Ictidomys_tridecemlineatus
ENSCJAG00000016032	CASC3	100	88.636	ENSJJAG00000023525	Casc3	100	88.494	Jaculus_jaculus
ENSCJAG00000016032	CASC3	62	69.173	ENSLBEG00000005435	casc3	56	62.500	Labrus_bergylta
ENSCJAG00000016032	CASC3	98	56.923	ENSLACG00000013200	CASC3	99	55.586	Latimeria_chalumnae
ENSCJAG00000016032	CASC3	73	73.430	ENSLOCG00000013518	casc3	71	70.531	Lepisosteus_oculatus
ENSCJAG00000016032	CASC3	100	90.469	ENSLAFG00000000606	CASC3	100	90.469	Loxodonta_africana
ENSCJAG00000016032	CASC3	100	95.739	ENSMFAG00000041496	CASC3	100	95.739	Macaca_fascicularis
ENSCJAG00000016032	CASC3	100	95.739	ENSMMUG00000045187	CASC3	100	95.739	Macaca_mulatta
ENSCJAG00000016032	CASC3	89	95.375	ENSMLEG00000029049	CASC3	99	95.375	Mandrillus_leucophaeus
ENSCJAG00000016032	CASC3	76	52.778	ENSMAMG00000005235	casc3	71	54.762	Mastacembelus_armatus
ENSCJAG00000016032	CASC3	86	73.026	ENSMGAG00000013247	CASC3	99	71.545	Meleagris_gallopavo
ENSCJAG00000016032	CASC3	71	88.600	ENSMAUG00000006023	Casc3	80	88.600	Mesocricetus_auratus
ENSCJAG00000016032	CASC3	100	90.909	ENSMICG00000003321	CASC3	100	92.045	Microcebus_murinus
ENSCJAG00000016032	CASC3	100	89.900	ENSMOCG00000013644	Casc3	100	88.762	Microtus_ochrogaster
ENSCJAG00000016032	CASC3	78	53.086	ENSMMOG00000014339	casc3	76	54.585	Mola_mola
ENSCJAG00000016032	CASC3	100	77.620	ENSMODG00000013044	CASC3	92	77.904	Monodelphis_domestica
ENSCJAG00000016032	CASC3	100	89.616	MGP_CAROLIEiJ_G0017099	Casc3	100	89.189	Mus_caroli
ENSCJAG00000016032	CASC3	100	88.620	ENSMUSG00000078676	Casc3	100	88.193	Mus_musculus
ENSCJAG00000016032	CASC3	100	88.620	MGP_SPRETEiJ_G0017943	Casc3	100	88.193	Mus_spretus
ENSCJAG00000016032	CASC3	100	92.603	ENSMPUG00000014903	CASC3	100	92.603	Mustela_putorius_furo
ENSCJAG00000016032	CASC3	100	90.071	ENSMLUG00000010520	CASC3	100	90.071	Myotis_lucifugus
ENSCJAG00000016032	CASC3	100	89.047	ENSNGAG00000023121	Casc3	100	88.905	Nannospalax_galili
ENSCJAG00000016032	CASC3	100	94.310	ENSNLEG00000001598	CASC3	100	94.310	Nomascus_leucogenys
ENSCJAG00000016032	CASC3	80	89.437	ENSMEUG00000015662	CASC3	97	69.388	Notamacropus_eugenii
ENSCJAG00000016032	CASC3	73	88.086	ENSOPRG00000007240	-	79	100.000	Ochotona_princeps
ENSCJAG00000016032	CASC3	100	87.110	ENSODEG00000017858	CASC3	100	87.394	Octodon_degus
ENSCJAG00000016032	CASC3	74	55.649	ENSONIG00000009337	casc3	91	51.852	Oreochromis_niloticus
ENSCJAG00000016032	CASC3	79	52.696	ENSOANG00000003499	-	96	52.522	Ornithorhynchus_anatinus
ENSCJAG00000016032	CASC3	100	92.603	ENSOCUG00000002954	CASC3	100	92.034	Oryctolagus_cuniculus
ENSCJAG00000016032	CASC3	99	92.847	ENSOGAG00000034486	CASC3	98	92.847	Otolemur_garnettii
ENSCJAG00000016032	CASC3	100	91.607	ENSOARG00000013239	CASC3	100	91.607	Ovis_aries
ENSCJAG00000016032	CASC3	100	95.021	ENSPPAG00000035069	CASC3	100	95.021	Pan_paniscus
ENSCJAG00000016032	CASC3	100	93.172	ENSPPRG00000023670	CASC3	100	93.172	Panthera_pardus
ENSCJAG00000016032	CASC3	91	92.779	ENSPTIG00000010891	CASC3	91	92.779	Panthera_tigris_altaica
ENSCJAG00000016032	CASC3	100	95.739	ENSPANG00000021708	CASC3	100	95.739	Papio_anubis
ENSCJAG00000016032	CASC3	99	48.035	ENSPKIG00000023186	casc3	99	45.891	Paramormyrops_kingsleyae
ENSCJAG00000016032	CASC3	100	90.185	ENSPEMG00000009774	Casc3	100	89.758	Peromyscus_maniculatus_bairdii
ENSCJAG00000016032	CASC3	100	80.426	ENSPCIG00000025678	CASC3	100	80.142	Phascolarctos_cinereus
ENSCJAG00000016032	CASC3	90	47.440	ENSPFOG00000017632	casc3	92	48.397	Poecilia_formosa
ENSCJAG00000016032	CASC3	78	52.652	ENSPLAG00000005268	casc3	72	51.840	Poecilia_latipinna
ENSCJAG00000016032	CASC3	63	48.035	ENSPMEG00000010299	casc3	73	47.817	Poecilia_mexicana
ENSCJAG00000016032	CASC3	67	64.667	ENSPREG00000011856	casc3	82	50.987	Poecilia_reticulata
ENSCJAG00000016032	CASC3	100	94.168	ENSPPYG00000008467	CASC3	100	95.021	Pongo_abelii
ENSCJAG00000016032	CASC3	100	90.625	ENSPCOG00000008183	CASC3	100	91.051	Propithecus_coquereli
ENSCJAG00000016032	CASC3	100	92.461	ENSPVAG00000008556	CASC3	100	92.461	Pteropus_vampyrus
ENSCJAG00000016032	CASC3	92	91.391	ENSRNOG00000009716	Casc3	100	90.397	Rattus_norvegicus
ENSCJAG00000016032	CASC3	100	95.881	ENSRBIG00000033289	CASC3	100	95.292	Rhinopithecus_bieti
ENSCJAG00000016032	CASC3	100	95.881	ENSRROG00000022337	CASC3	100	95.881	Rhinopithecus_roxellana
ENSCJAG00000016032	CASC3	88	95.307	ENSSBOG00000031406	CASC3	98	96.926	Saimiri_boliviensis_boliviensis
ENSCJAG00000016032	CASC3	89	82.006	ENSSHAG00000013338	CASC3	99	81.600	Sarcophilus_harrisii
ENSCJAG00000016032	CASC3	66	67.361	ENSSMAG00000016096	casc3	75	61.350	Scophthalmus_maximus
ENSCJAG00000016032	CASC3	79	50.379	ENSSDUG00000016893	casc3	88	44.460	Seriola_dumerili
ENSCJAG00000016032	CASC3	81	50.199	ENSSLDG00000020308	casc3	90	45.141	Seriola_lalandi_dorsalis
ENSCJAG00000016032	CASC3	85	78.114	ENSSARG00000010378	CASC3	98	78.114	Sorex_araneus
ENSCJAG00000016032	CASC3	74	54.202	ENSSPAG00000023008	casc3	72	52.510	Stegastes_partitus
ENSCJAG00000016032	CASC3	89	90.415	ENSSSCG00000017477	CASC3	98	90.369	Sus_scrofa
ENSCJAG00000016032	CASC3	75	72.624	ENSTGUG00000002300	CASC3	99	72.624	Taeniopygia_guttata
ENSCJAG00000016032	CASC3	89	44.944	ENSTRUG00000000673	casc3	99	43.822	Takifugu_rubripes
ENSCJAG00000016032	CASC3	66	95.755	ENSTBEG00000017459	CASC3	67	95.755	Tupaia_belangeri
ENSCJAG00000016032	CASC3	86	81.126	ENSTTRG00000016896	CASC3	98	80.976	Tursiops_truncatus
ENSCJAG00000016032	CASC3	100	92.330	ENSUAMG00000015116	CASC3	100	94.098	Ursus_americanus
ENSCJAG00000016032	CASC3	89	92.173	ENSUMAG00000017697	CASC3	100	93.814	Ursus_maritimus
ENSCJAG00000016032	CASC3	75	98.319	ENSVPAG00000000799	CASC3	75	98.319	Vicugna_pacos
ENSCJAG00000016032	CASC3	100	93.457	ENSVVUG00000000997	CASC3	100	93.457	Vulpes_vulpes
ENSCJAG00000016032	CASC3	89	58.009	ENSXETG00000024395	casc3	98	55.726	Xenopus_tropicalis
ENSCJAG00000016032	CASC3	71	62.778	ENSXMAG00000013937	casc3	78	51.393	Xiphophorus_maculatus