EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000016233 (Gene tree)
Gene ID: 100393512
Gene Symbol: STAU1
Alias: PPP1R150|STAU
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 70021 bases
Position: chrNTIC01034389.1:41629503-41699523
Accession: 100393512
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000064915	dsrm	PF00035.26	1.9e-33	1	3
ENSCJAP00000064915	dsrm	PF00035.26	1.9e-33	2	3
ENSCJAP00000064915	dsrm	PF00035.26	1.9e-33	3	3
ENSCJAP00000029890	dsrm	PF00035.26	2.3e-33	1	3
ENSCJAP00000029890	dsrm	PF00035.26	2.3e-33	2	3
ENSCJAP00000029890	dsrm	PF00035.26	2.3e-33	3	3
ENSCJAP00000064507	dsrm	PF00035.26	4.3e-33	1	3
ENSCJAP00000064507	dsrm	PF00035.26	4.3e-33	2	3
ENSCJAP00000064507	dsrm	PF00035.26	4.3e-33	3	3
ENSCJAP00000029982	dsrm	PF00035.26	5.1e-30	1	3
ENSCJAP00000029982	dsrm	PF00035.26	5.1e-30	2	3
ENSCJAP00000029982	dsrm	PF00035.26	5.1e-30	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000081597	STAU1-201	7082	-	ENSCJAP00000064915	638 (aa)	-	A0A2R8MTX8
ENSCJAT00000082836	STAU1-202	6533	-	ENSCJAP00000064507	577 (aa)	XP_002747678	U3EGS0
ENSCJAT00000031684	STAU1-203	1779	-	ENSCJAP00000029982	592 (aa)	-	F7I2K9
ENSCJAT00000031586	STAU1-204	3032	-	ENSCJAP00000029890	663 (aa)	-	F7INW0

Gene Model

Click here to download ENSCJAG00000016233's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000016233's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000016233	STAU1	87	48.664	ENSCJAG00000007632	STAU2	96	48.767
ENSCJAG00000016233	STAU1	86	47.582	ENSCJAG00000009484	-	89	53.989

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000016233	STAU1	100	99.480	ENSG00000124214	STAU1	100	99.497	Homo_sapiens
ENSCJAG00000016233	STAU1	95	71.269	ENSAPOG00000017260	stau1	93	71.269	Acanthochromis_polyacanthus
ENSCJAG00000016233	STAU1	99	95.644	ENSAMEG00000013681	STAU1	95	95.644	Ailuropoda_melanoleuca
ENSCJAG00000016233	STAU1	99	74.950	ENSACIG00000015918	stau1	96	75.595	Amphilophus_citrinellus
ENSCJAG00000016233	STAU1	95	72.388	ENSAOCG00000012224	stau1	93	72.388	Amphiprion_ocellaris
ENSCJAG00000016233	STAU1	95	72.388	ENSAPEG00000012308	stau1	96	72.388	Amphiprion_percula
ENSCJAG00000016233	STAU1	99	74.560	ENSATEG00000024600	stau1	99	74.560	Anabas_testudineus
ENSCJAG00000016233	STAU1	99	88.454	ENSAPLG00000010527	STAU1	94	89.432	Anas_platyrhynchos
ENSCJAG00000016233	STAU1	99	88.477	ENSACAG00000015909	STAU1	97	87.954	Anolis_carolinensis
ENSCJAG00000016233	STAU1	100	98.971	ENSANAG00000032714	STAU1	100	99.828	Aotus_nancymaae
ENSCJAG00000016233	STAU1	99	73.010	ENSACLG00000012270	stau1	96	73.010	Astatotilapia_calliptera
ENSCJAG00000016233	STAU1	95	72.777	ENSAMXG00000016812	stau1	99	70.537	Astyanax_mexicanus
ENSCJAG00000016233	STAU1	100	95.667	ENSBTAG00000000241	STAU1	100	95.667	Bos_taurus
ENSCJAG00000016233	STAU1	100	96.880	ENSCAFG00000011347	STAU1	100	95.349	Canis_familiaris
ENSCJAG00000016233	STAU1	100	95.349	ENSCAFG00020017123	STAU1	100	95.349	Canis_lupus_dingo
ENSCJAG00000016233	STAU1	100	95.321	ENSCHIG00000001799	-	100	95.321	Capra_hircus
ENSCJAG00000016233	STAU1	100	95.494	ENSTSYG00000036179	-	100	95.494	Carlito_syrichta
ENSCJAG00000016233	STAU1	86	93.952	ENSCAPG00000017041	STAU1	100	93.952	Cavia_aperea
ENSCJAG00000016233	STAU1	85	92.121	ENSCPOG00000005566	STAU1	100	92.929	Cavia_porcellus
ENSCJAG00000016233	STAU1	100	98.799	ENSCCAG00000034339	STAU1	100	99.657	Cebus_capucinus
ENSCJAG00000016233	STAU1	100	99.653	ENSCATG00000028474	STAU1	100	99.653	Cercocebus_atys
ENSCJAG00000016233	STAU1	86	78.313	ENSCLAG00000002784	-	100	78.313	Chinchilla_lanigera
ENSCJAG00000016233	STAU1	85	95.960	ENSCLAG00000006516	-	100	96.768	Chinchilla_lanigera
ENSCJAG00000016233	STAU1	86	99.395	ENSCSAG00000014986	STAU1	100	99.395	Chlorocebus_sabaeus
ENSCJAG00000016233	STAU1	100	97.059	ENSCHOG00000001511	STAU1	100	97.059	Choloepus_hoffmanni
ENSCJAG00000016233	STAU1	99	88.477	ENSCPBG00000026741	STAU1	97	87.954	Chrysemys_picta_bellii
ENSCJAG00000016233	STAU1	100	99.480	ENSCANG00000039220	STAU1	100	99.480	Colobus_angolensis_palliatus
ENSCJAG00000016233	STAU1	85	90.505	ENSCGRG00001013453	Stau1	100	91.313	Cricetulus_griseus_chok1gshd
ENSCJAG00000016233	STAU1	85	90.505	ENSCGRG00000007216	Stau1	100	91.313	Cricetulus_griseus_crigri
ENSCJAG00000016233	STAU1	99	65.038	ENSCSEG00000000792	stau1	74	65.730	Cynoglossus_semilaevis
ENSCJAG00000016233	STAU1	99	68.750	ENSCVAG00000005906	stau1	99	69.324	Cyprinodon_variegatus
ENSCJAG00000016233	STAU1	99	73.541	ENSDARG00000044182	stau1	96	73.541	Danio_rerio
ENSCJAG00000016233	STAU1	100	97.751	ENSDNOG00000014933	STAU1	98	97.751	Dasypus_novemcinctus
ENSCJAG00000016233	STAU1	85	91.207	ENSDORG00000030220	Stau1	100	91.207	Dipodomys_ordii
ENSCJAG00000016233	STAU1	88	97.044	ENSETEG00000018235	STAU1	88	97.044	Echinops_telfairi
ENSCJAG00000016233	STAU1	100	96.881	ENSEASG00005023343	STAU1	100	97.599	Equus_asinus_asinus
ENSCJAG00000016233	STAU1	100	97.574	ENSECAG00000012894	STAU1	100	97.574	Equus_caballus
ENSCJAG00000016233	STAU1	90	100.000	ENSEEUG00000014344	STAU1	80	100.000	Erinaceus_europaeus
ENSCJAG00000016233	STAU1	95	72.605	ENSELUG00000002529	stau1	93	70.330	Esox_lucius
ENSCJAG00000016233	STAU1	100	97.054	ENSFCAG00000001447	STAU1	100	97.054	Felis_catus
ENSCJAG00000016233	STAU1	99	87.352	ENSFALG00000012940	STAU1	96	87.352	Ficedula_albicollis
ENSCJAG00000016233	STAU1	86	72.837	ENSFDAG00000020837	-	100	72.144	Fukomys_damarensis
ENSCJAG00000016233	STAU1	85	95.152	ENSFDAG00000014119	-	100	95.960	Fukomys_damarensis
ENSCJAG00000016233	STAU1	99	73.190	ENSFHEG00000013517	stau1	98	71.537	Fundulus_heteroclitus
ENSCJAG00000016233	STAU1	89	63.109	ENSGMOG00000016850	stau1	96	61.552	Gadus_morhua
ENSCJAG00000016233	STAU1	99	89.921	ENSGALG00000004736	STAU1	96	89.921	Gallus_gallus
ENSCJAG00000016233	STAU1	95	73.581	ENSGAFG00000010437	stau1	96	73.581	Gambusia_affinis
ENSCJAG00000016233	STAU1	99	72.692	ENSGACG00000001352	stau1	98	69.620	Gasterosteus_aculeatus
ENSCJAG00000016233	STAU1	99	89.130	ENSGAGG00000009825	STAU1	96	89.130	Gopherus_agassizii
ENSCJAG00000016233	STAU1	100	93.515	ENSGGOG00000025351	STAU1	100	99.452	Gorilla_gorilla
ENSCJAG00000016233	STAU1	99	73.204	ENSHBUG00000023668	stau1	96	73.204	Haplochromis_burtoni
ENSCJAG00000016233	STAU1	85	97.137	ENSHGLG00000008730	STAU1	100	97.137	Heterocephalus_glaber_female
ENSCJAG00000016233	STAU1	85	97.137	ENSHGLG00100000098	STAU1	100	97.137	Heterocephalus_glaber_male
ENSCJAG00000016233	STAU1	94	68.097	ENSHCOG00000018461	stau1	94	66.306	Hippocampus_comes
ENSCJAG00000016233	STAU1	94	74.534	ENSIPUG00000023725	stau1	95	74.534	Ictalurus_punctatus
ENSCJAG00000016233	STAU1	85	96.115	ENSSTOG00000003634	STAU1	100	96.115	Ictidomys_tridecemlineatus
ENSCJAG00000016233	STAU1	85	94.070	ENSJJAG00000020032	Stau1	100	94.070	Jaculus_jaculus
ENSCJAG00000016233	STAU1	95	71.513	ENSKMAG00000007135	stau1	93	72.157	Kryptolebias_marmoratus
ENSCJAG00000016233	STAU1	99	69.686	ENSLBEG00000020172	stau1	98	68.223	Labrus_bergylta
ENSCJAG00000016233	STAU1	99	83.333	ENSLACG00000016157	STAU1	96	83.333	Latimeria_chalumnae
ENSCJAG00000016233	STAU1	99	78.030	ENSLOCG00000003134	stau1	96	77.196	Lepisosteus_oculatus
ENSCJAG00000016233	STAU1	88	95.088	ENSLAFG00000003238	STAU1	100	95.088	Loxodonta_africana
ENSCJAG00000016233	STAU1	100	99.653	ENSMFAG00000040931	STAU1	100	99.653	Macaca_fascicularis
ENSCJAG00000016233	STAU1	100	93.686	ENSMMUG00000002302	STAU1	100	99.632	Macaca_mulatta
ENSCJAG00000016233	STAU1	100	99.653	ENSMNEG00000033821	STAU1	100	99.653	Macaca_nemestrina
ENSCJAG00000016233	STAU1	100	99.480	ENSMLEG00000031383	STAU1	100	99.480	Mandrillus_leucophaeus
ENSCJAG00000016233	STAU1	99	73.295	ENSMAMG00000017586	stau1	99	72.932	Mastacembelus_armatus
ENSCJAG00000016233	STAU1	99	70.501	ENSMZEG00005015605	stau1	96	70.501	Maylandia_zebra
ENSCJAG00000016233	STAU1	99	88.650	ENSMGAG00000004719	STAU1	94	89.628	Meleagris_gallopavo
ENSCJAG00000016233	STAU1	85	90.505	ENSMAUG00000013846	Stau1	100	91.313	Mesocricetus_auratus
ENSCJAG00000016233	STAU1	100	96.226	ENSMICG00000001995	STAU1	100	96.913	Microcebus_murinus
ENSCJAG00000016233	STAU1	85	92.229	ENSMOCG00000018743	Stau1	100	92.727	Microtus_ochrogaster
ENSCJAG00000016233	STAU1	90	70.117	ENSMMOG00000015455	stau1	99	73.494	Mola_mola
ENSCJAG00000016233	STAU1	99	92.927	ENSMODG00000016276	STAU1	99	92.927	Monodelphis_domestica
ENSCJAG00000016233	STAU1	99	72.556	ENSMALG00000000045	stau1	96	72.201	Monopterus_albus
ENSCJAG00000016233	STAU1	85	92.025	MGP_CAROLIEiJ_G0024699	Stau1	100	92.025	Mus_caroli
ENSCJAG00000016233	STAU1	85	91.411	ENSMUSG00000039536	Stau1	100	91.411	Mus_musculus
ENSCJAG00000016233	STAU1	85	91.616	MGP_PahariEiJ_G0026141	Stau1	100	91.616	Mus_pahari
ENSCJAG00000016233	STAU1	85	91.002	MGP_SPRETEiJ_G0025619	Stau1	100	91.002	Mus_spretus
ENSCJAG00000016233	STAU1	99	96.832	ENSMPUG00000017581	STAU1	99	96.832	Mustela_putorius_furo
ENSCJAG00000016233	STAU1	100	97.054	ENSMLUG00000008407	STAU1	98	97.054	Myotis_lucifugus
ENSCJAG00000016233	STAU1	85	93.939	ENSNGAG00000007108	Stau1	100	94.747	Nannospalax_galili
ENSCJAG00000016233	STAU1	99	73.204	ENSNBRG00000017596	stau1	96	73.204	Neolamprologus_brichardi
ENSCJAG00000016233	STAU1	100	99.133	ENSNLEG00000006955	STAU1	100	99.133	Nomascus_leucogenys
ENSCJAG00000016233	STAU1	99	86.038	ENSMEUG00000003263	STAU1	99	86.038	Notamacropus_eugenii
ENSCJAG00000016233	STAU1	99	88.811	ENSOPRG00000014569	STAU1	100	88.811	Ochotona_princeps
ENSCJAG00000016233	STAU1	86	95.565	ENSODEG00000006523	STAU1	100	95.968	Octodon_degus
ENSCJAG00000016233	STAU1	99	73.398	ENSONIG00000004152	stau1	95	73.398	Oreochromis_niloticus
ENSCJAG00000016233	STAU1	99	87.891	ENSOANG00000006394	STAU1	98	87.380	Ornithorhynchus_anatinus
ENSCJAG00000016233	STAU1	100	94.454	ENSOCUG00000006214	STAU1	100	94.454	Oryctolagus_cuniculus
ENSCJAG00000016233	STAU1	99	70.037	ENSOMEG00000002388	stau1	98	68.784	Oryzias_melastigma
ENSCJAG00000016233	STAU1	85	66.866	ENSOGAG00000028222	-	99	67.339	Otolemur_garnettii
ENSCJAG00000016233	STAU1	100	97.227	ENSOGAG00000002127	STAU1	98	97.227	Otolemur_garnettii
ENSCJAG00000016233	STAU1	100	95.321	ENSOARG00000012204	STAU1	100	94.892	Ovis_aries
ENSCJAG00000016233	STAU1	100	93.686	ENSPPAG00000032023	STAU1	100	99.452	Pan_paniscus
ENSCJAG00000016233	STAU1	100	96.880	ENSPPRG00000003436	STAU1	100	96.976	Panthera_pardus
ENSCJAG00000016233	STAU1	100	96.880	ENSPTIG00000011768	STAU1	100	96.880	Panthera_tigris_altaica
ENSCJAG00000016233	STAU1	100	93.686	ENSPTRG00000023130	STAU1	100	99.452	Pan_troglodytes
ENSCJAG00000016233	STAU1	100	99.480	ENSPANG00000020560	STAU1	100	99.480	Papio_anubis
ENSCJAG00000016233	STAU1	95	72.150	ENSPKIG00000024588	stau1	93	71.800	Paramormyrops_kingsleyae
ENSCJAG00000016233	STAU1	99	88.933	ENSPSIG00000010731	STAU1	95	88.933	Pelodiscus_sinensis
ENSCJAG00000016233	STAU1	88	74.023	ENSPMGG00000018553	stau1	99	72.065	Periophthalmus_magnuspinnatus
ENSCJAG00000016233	STAU1	85	91.111	ENSPEMG00000022045	Stau1	100	91.717	Peromyscus_maniculatus_bairdii
ENSCJAG00000016233	STAU1	100	92.593	ENSPCIG00000023269	STAU1	100	92.967	Phascolarctos_cinereus
ENSCJAG00000016233	STAU1	99	73.633	ENSPFOG00000017253	stau1	96	73.633	Poecilia_formosa
ENSCJAG00000016233	STAU1	56	68.405	ENSPLAG00000014829	stau1	85	68.328	Poecilia_latipinna
ENSCJAG00000016233	STAU1	94	72.917	ENSPMEG00000007495	stau1	94	72.917	Poecilia_mexicana
ENSCJAG00000016233	STAU1	99	73.047	ENSPREG00000003477	stau1	96	73.047	Poecilia_reticulata
ENSCJAG00000016233	STAU1	100	99.133	ENSPPYG00000011111	STAU1	100	99.133	Pongo_abelii
ENSCJAG00000016233	STAU1	94	88.603	ENSPCAG00000002459	STAU1	100	88.603	Procavia_capensis
ENSCJAG00000016233	STAU1	100	97.574	ENSPCOG00000027746	STAU1	100	97.574	Propithecus_coquereli
ENSCJAG00000016233	STAU1	86	97.449	ENSPVAG00000015019	STAU1	86	97.449	Pteropus_vampyrus
ENSCJAG00000016233	STAU1	99	73.204	ENSPNYG00000014436	stau1	96	73.204	Pundamilia_nyererei
ENSCJAG00000016233	STAU1	99	72.727	ENSPNAG00000011323	stau1	96	73.114	Pygocentrus_nattereri
ENSCJAG00000016233	STAU1	85	90.707	ENSRNOG00000007781	Stau1	100	91.515	Rattus_norvegicus
ENSCJAG00000016233	STAU1	86	98.406	ENSRBIG00000037345	STAU1	100	99.402	Rhinopithecus_bieti
ENSCJAG00000016233	STAU1	100	99.653	ENSRROG00000039008	STAU1	100	99.653	Rhinopithecus_roxellana
ENSCJAG00000016233	STAU1	100	98.799	ENSSBOG00000034448	STAU1	100	99.657	Saimiri_boliviensis_boliviensis
ENSCJAG00000016233	STAU1	99	93.543	ENSSHAG00000009492	STAU1	97	93.543	Sarcophilus_harrisii
ENSCJAG00000016233	STAU1	95	75.000	ENSSFOG00015021497	stau1	99	70.117	Scleropages_formosus
ENSCJAG00000016233	STAU1	99	72.015	ENSSMAG00000017410	stau1	96	72.015	Scophthalmus_maximus
ENSCJAG00000016233	STAU1	95	72.761	ENSSDUG00000019439	stau1	96	72.761	Seriola_dumerili
ENSCJAG00000016233	STAU1	95	72.761	ENSSLDG00000025040	stau1	93	72.761	Seriola_lalandi_dorsalis
ENSCJAG00000016233	STAU1	64	94.118	ENSSARG00000010389	-	64	94.118	Sorex_araneus
ENSCJAG00000016233	STAU1	99	87.695	ENSSPUG00000017983	STAU1	100	88.650	Sphenodon_punctatus
ENSCJAG00000016233	STAU1	95	72.388	ENSSPAG00000019275	stau1	93	72.388	Stegastes_partitus
ENSCJAG00000016233	STAU1	100	97.747	ENSSSCG00000027444	STAU1	100	97.747	Sus_scrofa
ENSCJAG00000016233	STAU1	99	87.109	ENSTGUG00000008784	STAU1	93	88.086	Taeniopygia_guttata
ENSCJAG00000016233	STAU1	95	74.706	ENSTRUG00000005837	stau1	93	75.342	Takifugu_rubripes
ENSCJAG00000016233	STAU1	94	72.308	ENSTNIG00000014732	stau1	96	70.709	Tetraodon_nigroviridis
ENSCJAG00000016233	STAU1	91	94.923	ENSTBEG00000009404	STAU1	100	83.218	Tupaia_belangeri
ENSCJAG00000016233	STAU1	100	85.962	ENSTTRG00000004285	STAU1	100	85.962	Tursiops_truncatus
ENSCJAG00000016233	STAU1	86	94.235	ENSUAMG00000025449	STAU1	100	94.235	Ursus_americanus
ENSCJAG00000016233	STAU1	64	92.328	ENSUMAG00000024475	STAU1	89	92.328	Ursus_maritimus
ENSCJAG00000016233	STAU1	100	97.400	ENSVPAG00000001313	STAU1	100	97.400	Vicugna_pacos
ENSCJAG00000016233	STAU1	100	95.543	ENSVVUG00000022325	STAU1	100	95.543	Vulpes_vulpes
ENSCJAG00000016233	STAU1	99	82.051	ENSXETG00000001783	stau1	96	82.249	Xenopus_tropicalis
ENSCJAG00000016233	STAU1	53	65.287	ENSXCOG00000008804	stau1	83	65.758	Xiphophorus_couchianus
ENSCJAG00000016233	STAU1	99	73.581	ENSXMAG00000016175	stau1	96	73.581	Xiphophorus_maculatus