EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000016364 (Gene tree)
Gene ID: 100413984
Gene Symbol: PTCD2
Alias: FLJ12598
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 44002 bases
Position: chrNTIC01011112.1:66124891-66168892
Accession: 25734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000030135	MRP-S27	PF10037.9	8.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000054017	PTCD2-202	840	-	ENSCJAP00000048151	279 (aa)	-	F7H3Q6
ENSCJAT00000055753	PTCD2-203	651	-	ENSCJAP00000051667	216 (aa)	-	F6YH65
ENSCJAT00000031845	PTCD2-201	1167	-	ENSCJAP00000030135	388 (aa)	-	U3C1W6

Gene Model

Click here to download ENSCJAG00000016364's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000016364's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000016364	PTCD2	100	87.629	ENSG00000049883	PTCD2	100	87.629	Homo_sapiens
ENSCJAG00000016364	PTCD2	90	46.839	ENSAPOG00000020682	ptcd2	91	46.839	Acanthochromis_polyacanthus
ENSCJAG00000016364	PTCD2	99	78.961	ENSAMEG00000007194	PTCD2	99	78.961	Ailuropoda_melanoleuca
ENSCJAG00000016364	PTCD2	89	40.115	ENSACIG00000002053	ptcd2	100	40.115	Amphilophus_citrinellus
ENSCJAG00000016364	PTCD2	90	45.977	ENSAOCG00000006616	ptcd2	89	45.977	Amphiprion_ocellaris
ENSCJAG00000016364	PTCD2	90	45.977	ENSAPEG00000022926	ptcd2	89	45.977	Amphiprion_percula
ENSCJAG00000016364	PTCD2	98	56.464	ENSACAG00000009747	PTCD2	95	56.464	Anolis_carolinensis
ENSCJAG00000016364	PTCD2	100	95.619	ENSANAG00000029353	PTCD2	100	95.619	Aotus_nancymaae
ENSCJAG00000016364	PTCD2	97	41.645	ENSACLG00000027742	ptcd2	94	41.645	Astatotilapia_calliptera
ENSCJAG00000016364	PTCD2	85	44.817	ENSAMXG00000029404	ptcd2	88	44.817	Astyanax_mexicanus
ENSCJAG00000016364	PTCD2	99	82.031	ENSBTAG00000014675	PTCD2	100	82.031	Bos_taurus
ENSCJAG00000016364	PTCD2	99	78.182	ENSCAFG00000007982	PTCD2	90	78.182	Canis_familiaris
ENSCJAG00000016364	PTCD2	89	79.769	ENSCAFG00020019147	PTCD2	97	79.769	Canis_lupus_dingo
ENSCJAG00000016364	PTCD2	99	82.292	ENSCHIG00000017118	PTCD2	100	82.292	Capra_hircus
ENSCJAG00000016364	PTCD2	99	74.413	ENSCPOG00000040168	PTCD2	100	74.413	Cavia_porcellus
ENSCJAG00000016364	PTCD2	100	95.103	ENSCCAG00000029389	-	100	95.103	Cebus_capucinus
ENSCJAG00000016364	PTCD2	81	89.457	ENSCCAG00000021996	-	98	87.147	Cebus_capucinus
ENSCJAG00000016364	PTCD2	99	85.901	ENSCATG00000019069	PTCD2	100	85.901	Cercocebus_atys
ENSCJAG00000016364	PTCD2	99	73.107	ENSCLAG00000000072	PTCD2	100	73.107	Chinchilla_lanigera
ENSCJAG00000016364	PTCD2	99	88.512	ENSCSAG00000015623	PTCD2	100	88.512	Chlorocebus_sabaeus
ENSCJAG00000016364	PTCD2	89	58.046	ENSCHOG00000010634	PTCD2	100	58.046	Choloepus_hoffmanni
ENSCJAG00000016364	PTCD2	100	54.987	ENSCPBG00000000216	PTCD2	100	54.987	Chrysemys_picta_bellii
ENSCJAG00000016364	PTCD2	100	86.082	ENSCANG00000035636	PTCD2	100	86.082	Colobus_angolensis_palliatus
ENSCJAG00000016364	PTCD2	99	73.057	ENSCGRG00001015289	Ptcd2	84	73.057	Cricetulus_griseus_chok1gshd
ENSCJAG00000016364	PTCD2	99	73.057	ENSCGRG00000006193	Ptcd2	84	73.057	Cricetulus_griseus_crigri
ENSCJAG00000016364	PTCD2	90	43.391	ENSCVAG00000001285	ptcd2	89	43.391	Cyprinodon_variegatus
ENSCJAG00000016364	PTCD2	96	44.533	ENSDARG00000035391	ptcd2	97	44.533	Danio_rerio
ENSCJAG00000016364	PTCD2	99	76.501	ENSDNOG00000008719	PTCD2	100	76.501	Dasypus_novemcinctus
ENSCJAG00000016364	PTCD2	99	75.969	ENSDORG00000004921	Ptcd2	100	75.969	Dipodomys_ordii
ENSCJAG00000016364	PTCD2	99	67.268	ENSETEG00000016542	PTCD2	99	67.268	Echinops_telfairi
ENSCJAG00000016364	PTCD2	99	80.157	ENSEASG00005018038	PTCD2	100	80.157	Equus_asinus_asinus
ENSCJAG00000016364	PTCD2	99	79.688	ENSECAG00000007022	PTCD2	99	79.688	Equus_caballus
ENSCJAG00000016364	PTCD2	99	73.698	ENSEEUG00000014031	PTCD2	99	73.698	Erinaceus_europaeus
ENSCJAG00000016364	PTCD2	98	47.120	ENSELUG00000003584	ptcd2	99	47.120	Esox_lucius
ENSCJAG00000016364	PTCD2	99	72.868	ENSFCAG00000045432	PTCD2	83	72.868	Felis_catus
ENSCJAG00000016364	PTCD2	84	52.294	ENSFALG00000010299	PTCD2	99	52.294	Ficedula_albicollis
ENSCJAG00000016364	PTCD2	99	75.457	ENSFDAG00000018461	PTCD2	100	75.457	Fukomys_damarensis
ENSCJAG00000016364	PTCD2	90	47.863	ENSGMOG00000003637	ptcd2	91	47.863	Gadus_morhua
ENSCJAG00000016364	PTCD2	91	51.685	ENSGALG00000038260	PTCD2	93	51.685	Gallus_gallus
ENSCJAG00000016364	PTCD2	100	57.949	ENSGAGG00000021952	PTCD2	100	57.949	Gopherus_agassizii
ENSCJAG00000016364	PTCD2	100	87.887	ENSGGOG00000010695	PTCD2	100	87.887	Gorilla_gorilla
ENSCJAG00000016364	PTCD2	97	41.645	ENSHBUG00000009191	ptcd2	94	41.645	Haplochromis_burtoni
ENSCJAG00000016364	PTCD2	99	75.457	ENSHGLG00000001234	PTCD2	100	75.457	Heterocephalus_glaber_female
ENSCJAG00000016364	PTCD2	99	75.457	ENSHGLG00100015419	PTCD2	100	75.457	Heterocephalus_glaber_male
ENSCJAG00000016364	PTCD2	97	44.297	ENSHCOG00000001703	ptcd2	95	44.297	Hippocampus_comes
ENSCJAG00000016364	PTCD2	84	44.648	ENSIPUG00000006080	ptcd2	91	44.413	Ictalurus_punctatus
ENSCJAG00000016364	PTCD2	98	79.581	ENSSTOG00000006596	PTCD2	99	79.581	Ictidomys_tridecemlineatus
ENSCJAG00000016364	PTCD2	99	77.546	ENSJJAG00000024388	Ptcd2	100	77.546	Jaculus_jaculus
ENSCJAG00000016364	PTCD2	93	40.947	ENSKMAG00000009329	ptcd2	93	40.947	Kryptolebias_marmoratus
ENSCJAG00000016364	PTCD2	97	43.767	ENSLBEG00000024871	ptcd2	94	43.767	Labrus_bergylta
ENSCJAG00000016364	PTCD2	93	54.444	ENSLOCG00000011122	ptcd2	94	54.444	Lepisosteus_oculatus
ENSCJAG00000016364	PTCD2	80	80.064	ENSLAFG00000004115	PTCD2	100	80.064	Loxodonta_africana
ENSCJAG00000016364	PTCD2	100	86.340	ENSMFAG00000031516	PTCD2	100	86.340	Macaca_fascicularis
ENSCJAG00000016364	PTCD2	99	86.423	ENSMNEG00000007537	PTCD2	100	86.423	Macaca_nemestrina
ENSCJAG00000016364	PTCD2	100	85.825	ENSMLEG00000031093	PTCD2	100	85.825	Mandrillus_leucophaeus
ENSCJAG00000016364	PTCD2	97	45.358	ENSMAMG00000018529	ptcd2	96	45.358	Mastacembelus_armatus
ENSCJAG00000016364	PTCD2	97	41.645	ENSMZEG00005003625	ptcd2	94	41.645	Maylandia_zebra
ENSCJAG00000016364	PTCD2	90	51.724	ENSMGAG00000005033	PTCD2	100	51.724	Meleagris_gallopavo
ENSCJAG00000016364	PTCD2	99	57.702	ENSMAUG00000020253	Ptcd2	100	57.702	Mesocricetus_auratus
ENSCJAG00000016364	PTCD2	99	80.879	ENSMICG00000004535	PTCD2	99	80.879	Microcebus_murinus
ENSCJAG00000016364	PTCD2	99	73.107	ENSMOCG00000019985	Ptcd2	100	73.107	Microtus_ochrogaster
ENSCJAG00000016364	PTCD2	99	57.031	ENSMODG00000001695	PTCD2	100	57.031	Monodelphis_domestica
ENSCJAG00000016364	PTCD2	97	45.479	ENSMALG00000022372	ptcd2	96	45.479	Monopterus_albus
ENSCJAG00000016364	PTCD2	99	71.802	MGP_CAROLIEiJ_G0018829	Ptcd2	100	71.802	Mus_caroli
ENSCJAG00000016364	PTCD2	99	71.279	ENSMUSG00000021650	Ptcd2	100	71.279	Mus_musculus
ENSCJAG00000016364	PTCD2	99	74.151	MGP_PahariEiJ_G0015904	Ptcd2	100	74.151	Mus_pahari
ENSCJAG00000016364	PTCD2	99	72.063	MGP_SPRETEiJ_G0019711	Ptcd2	100	72.063	Mus_spretus
ENSCJAG00000016364	PTCD2	99	81.462	ENSMPUG00000014401	PTCD2	100	81.462	Mustela_putorius_furo
ENSCJAG00000016364	PTCD2	99	79.275	ENSMLUG00000007374	PTCD2	99	79.275	Myotis_lucifugus
ENSCJAG00000016364	PTCD2	99	73.107	ENSNGAG00000005027	Ptcd2	100	73.107	Nannospalax_galili
ENSCJAG00000016364	PTCD2	85	42.424	ENSNBRG00000000092	-	100	42.424	Neolamprologus_brichardi
ENSCJAG00000016364	PTCD2	97	41.910	ENSNBRG00000008174	ptcd2	96	41.910	Neolamprologus_brichardi
ENSCJAG00000016364	PTCD2	100	87.629	ENSNLEG00000004516	PTCD2	100	87.629	Nomascus_leucogenys
ENSCJAG00000016364	PTCD2	99	46.667	ENSMEUG00000014012	-	99	46.667	Notamacropus_eugenii
ENSCJAG00000016364	PTCD2	99	73.127	ENSOPRG00000007290	PTCD2	99	73.127	Ochotona_princeps
ENSCJAG00000016364	PTCD2	99	76.501	ENSODEG00000016417	PTCD2	100	76.501	Octodon_degus
ENSCJAG00000016364	PTCD2	82	43.396	ENSONIG00000011269	ptcd2	90	43.396	Oreochromis_niloticus
ENSCJAG00000016364	PTCD2	94	79.178	ENSOCUG00000007970	PTCD2	100	77.807	Oryctolagus_cuniculus
ENSCJAG00000016364	PTCD2	89	45.272	ENSORLG00000003851	ptcd2	88	45.087	Oryzias_latipes
ENSCJAG00000016364	PTCD2	89	44.699	ENSORLG00020009823	ptcd2	90	44.509	Oryzias_latipes_hni
ENSCJAG00000016364	PTCD2	89	44.413	ENSORLG00015016777	ptcd2	99	44.957	Oryzias_latipes_hsok
ENSCJAG00000016364	PTCD2	93	41.470	ENSOMEG00000012396	ptcd2	92	41.470	Oryzias_melastigma
ENSCJAG00000016364	PTCD2	99	74.160	ENSOGAG00000008390	PTCD2	99	74.160	Otolemur_garnettii
ENSCJAG00000016364	PTCD2	99	81.912	ENSOARG00000005087	PTCD2	99	81.912	Ovis_aries
ENSCJAG00000016364	PTCD2	100	87.629	ENSPPAG00000028480	PTCD2	100	87.629	Pan_paniscus
ENSCJAG00000016364	PTCD2	100	87.371	ENSPTRG00000016968	PTCD2	100	87.371	Pan_troglodytes
ENSCJAG00000016364	PTCD2	89	86.667	ENSPANG00000006611	PTCD2	89	86.667	Papio_anubis
ENSCJAG00000016364	PTCD2	91	47.191	ENSPKIG00000019896	ptcd2	93	47.191	Paramormyrops_kingsleyae
ENSCJAG00000016364	PTCD2	82	59.937	ENSPSIG00000014559	PTCD2	98	59.937	Pelodiscus_sinensis
ENSCJAG00000016364	PTCD2	99	73.506	ENSPEMG00000000884	Ptcd2	100	73.506	Peromyscus_maniculatus_bairdii
ENSCJAG00000016364	PTCD2	99	59.635	ENSPCIG00000029047	PTCD2	100	59.635	Phascolarctos_cinereus
ENSCJAG00000016364	PTCD2	83	43.478	ENSPLAG00000010456	ptcd2	91	42.816	Poecilia_latipinna
ENSCJAG00000016364	PTCD2	90	42.816	ENSPREG00000021797	ptcd2	88	42.816	Poecilia_reticulata
ENSCJAG00000016364	PTCD2	99	77.003	ENSPPYG00000015543	PTCD2	99	77.003	Pongo_abelii
ENSCJAG00000016364	PTCD2	80	66.667	ENSPCAG00000006806	PTCD2	99	66.667	Procavia_capensis
ENSCJAG00000016364	PTCD2	99	78.238	ENSPVAG00000010935	PTCD2	99	78.238	Pteropus_vampyrus
ENSCJAG00000016364	PTCD2	97	41.645	ENSPNYG00000003122	ptcd2	94	41.645	Pundamilia_nyererei
ENSCJAG00000016364	PTCD2	93	47.790	ENSPNAG00000021490	ptcd2	94	47.790	Pygocentrus_nattereri
ENSCJAG00000016364	PTCD2	99	72.021	ENSRNOG00000028403	Ptcd2	100	72.021	Rattus_norvegicus
ENSCJAG00000016364	PTCD2	100	80.928	ENSRBIG00000032929	PTCD2	100	80.928	Rhinopithecus_bieti
ENSCJAG00000016364	PTCD2	99	86.684	ENSRROG00000000080	PTCD2	100	86.684	Rhinopithecus_roxellana
ENSCJAG00000016364	PTCD2	99	91.906	ENSSBOG00000018911	PTCD2	100	91.906	Saimiri_boliviensis_boliviensis
ENSCJAG00000016364	PTCD2	99	60.938	ENSSHAG00000003833	PTCD2	99	60.938	Sarcophilus_harrisii
ENSCJAG00000016364	PTCD2	86	46.547	ENSSFOG00015015415	ptcd2	86	46.547	Scleropages_formosus
ENSCJAG00000016364	PTCD2	89	41.787	ENSSMAG00000010350	ptcd2	90	41.787	Scophthalmus_maximus
ENSCJAG00000016364	PTCD2	97	44.828	ENSSDUG00000008142	ptcd2	91	44.828	Seriola_dumerili
ENSCJAG00000016364	PTCD2	97	45.093	ENSSLDG00000015284	ptcd2	96	45.093	Seriola_lalandi_dorsalis
ENSCJAG00000016364	PTCD2	80	71.935	ENSSARG00000004983	PTCD2	99	71.935	Sorex_araneus
ENSCJAG00000016364	PTCD2	99	52.480	ENSSPUG00000000176	PTCD2	96	52.480	Sphenodon_punctatus
ENSCJAG00000016364	PTCD2	90	45.115	ENSSPAG00000008591	ptcd2	89	45.115	Stegastes_partitus
ENSCJAG00000016364	PTCD2	99	82.597	ENSSSCG00000016975	PTCD2	90	82.597	Sus_scrofa
ENSCJAG00000016364	PTCD2	89	52.464	ENSTGUG00000005705	PTCD2	99	52.464	Taeniopygia_guttata
ENSCJAG00000016364	PTCD2	99	77.202	ENSTBEG00000016559	PTCD2	99	77.202	Tupaia_belangeri
ENSCJAG00000016364	PTCD2	99	81.654	ENSTTRG00000011851	PTCD2	99	81.654	Tursiops_truncatus
ENSCJAG00000016364	PTCD2	99	79.221	ENSUAMG00000007583	PTCD2	90	79.221	Ursus_americanus
ENSCJAG00000016364	PTCD2	99	78.851	ENSUMAG00000007666	PTCD2	100	78.851	Ursus_maritimus
ENSCJAG00000016364	PTCD2	99	80.879	ENSVPAG00000009597	PTCD2	99	80.879	Vicugna_pacos
ENSCJAG00000016364	PTCD2	99	78.329	ENSVVUG00000007299	-	100	78.329	Vulpes_vulpes
ENSCJAG00000016364	PTCD2	93	51.667	ENSXETG00000031652	PTCD2	94	51.667	Xenopus_tropicalis
ENSCJAG00000016364	PTCD2	83	43.478	ENSXMAG00000005940	ptcd2	82	42.529	Xiphophorus_maculatus