EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000016509 (Gene tree)
Gene ID: 100405530
Gene Symbol: PRPF19
Alias: NMP200|PRP19|PSO4|SNEV|UBOX4|hPSO4
Full Name: pre-mRNA processing factor 19
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 17181 bases
Position: chrNTIC01001113.1:113076660-113093840
Accession: 100405530
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000030447	Prp19	PF08606.11	7.8e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000032174	PRPF19-201	3089	-	ENSCJAP00000030447	504 (aa)	XP_002755428	U3EI55

Gene Model

Click here to download ENSCJAG00000016509's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc03040	Spliceosome	KEGG
cjc04120	Ubiquitin mediated proteolysis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000016509's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000016509	PRPF19	56	30.612	ENSCJAG00000005972	POC1A	79	30.612
ENSCJAG00000016509	PRPF19	63	30.802	ENSCJAG00000019637	POC1B	65	30.802

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000016509	PRPF19	100	99.802	ENSG00000110107	PRPF19	100	100.000	Homo_sapiens
ENSCJAG00000016509	PRPF19	100	85.743	ENSAPOG00000017823	prpf19	100	85.743	Acanthochromis_polyacanthus
ENSCJAG00000016509	PRPF19	100	99.195	ENSAMEG00000007375	PRPF19	99	99.195	Ailuropoda_melanoleuca
ENSCJAG00000016509	PRPF19	99	84.493	ENSACIG00000015876	prpf19	99	84.493	Amphilophus_citrinellus
ENSCJAG00000016509	PRPF19	100	85.743	ENSAOCG00000020444	prpf19	100	85.743	Amphiprion_ocellaris
ENSCJAG00000016509	PRPF19	100	85.743	ENSAPEG00000016076	prpf19	100	85.743	Amphiprion_percula
ENSCJAG00000016509	PRPF19	100	85.743	ENSATEG00000008840	prpf19	100	85.743	Anabas_testudineus
ENSCJAG00000016509	PRPF19	100	97.222	ENSACAG00000017797	PRPF19	100	97.222	Anolis_carolinensis
ENSCJAG00000016509	PRPF19	100	99.802	ENSANAG00000021762	PRPF19	100	99.802	Aotus_nancymaae
ENSCJAG00000016509	PRPF19	100	84.752	ENSACLG00000009416	prpf19	100	84.752	Astatotilapia_calliptera
ENSCJAG00000016509	PRPF19	100	85.545	ENSAMXG00000011547	prpf19	100	85.545	Astyanax_mexicanus
ENSCJAG00000016509	PRPF19	100	99.603	ENSBTAG00000014366	PRPF19	100	99.603	Bos_taurus
ENSCJAG00000016509	PRPF19	100	51.581	WBGene00020423	prp-19	100	51.581	Caenorhabditis_elegans
ENSCJAG00000016509	PRPF19	100	99.206	ENSCAFG00000016438	PRPF19	98	99.206	Canis_familiaris
ENSCJAG00000016509	PRPF19	100	99.206	ENSCAFG00020012565	PRPF19	100	99.206	Canis_lupus_dingo
ENSCJAG00000016509	PRPF19	100	99.603	ENSCHIG00000018281	PRPF19	100	99.603	Capra_hircus
ENSCJAG00000016509	PRPF19	99	98.996	ENSTSYG00000006860	PRPF19	99	98.996	Carlito_syrichta
ENSCJAG00000016509	PRPF19	99	98.798	ENSCAPG00000016225	PRPF19	100	98.798	Cavia_aperea
ENSCJAG00000016509	PRPF19	100	99.206	ENSCPOG00000020688	PRPF19	100	99.206	Cavia_porcellus
ENSCJAG00000016509	PRPF19	100	100.000	ENSCCAG00000025839	PRPF19	100	100.000	Cebus_capucinus
ENSCJAG00000016509	PRPF19	100	99.802	ENSCATG00000041921	PRPF19	100	99.802	Cercocebus_atys
ENSCJAG00000016509	PRPF19	99	99.195	ENSCLAG00000003338	PRPF19	100	99.195	Chinchilla_lanigera
ENSCJAG00000016509	PRPF19	100	99.802	ENSCSAG00000006254	PRPF19	100	99.802	Chlorocebus_sabaeus
ENSCJAG00000016509	PRPF19	62	88.103	ENSCHOG00000005840	PRPF19	100	88.103	Choloepus_hoffmanni
ENSCJAG00000016509	PRPF19	100	97.421	ENSCPBG00000027061	PRPF19	100	97.421	Chrysemys_picta_bellii
ENSCJAG00000016509	PRPF19	87	68.349	ENSCING00000016625	-	99	68.349	Ciona_intestinalis
ENSCJAG00000016509	PRPF19	100	68.452	ENSCSAVG00000002027	-	99	68.452	Ciona_savignyi
ENSCJAG00000016509	PRPF19	99	98.693	ENSCANG00000027155	PRPF19	99	46.257	Colobus_angolensis_palliatus
ENSCJAG00000016509	PRPF19	100	99.206	ENSCGRG00001002699	Prpf19	100	99.206	Cricetulus_griseus_chok1gshd
ENSCJAG00000016509	PRPF19	100	98.214	ENSCGRG00000008964	Prpf19	100	98.214	Cricetulus_griseus_crigri
ENSCJAG00000016509	PRPF19	100	84.752	ENSCSEG00000010411	prpf19	100	84.752	Cynoglossus_semilaevis
ENSCJAG00000016509	PRPF19	100	84.554	ENSCVAG00000012011	prpf19	100	84.554	Cyprinodon_variegatus
ENSCJAG00000016509	PRPF19	100	85.149	ENSDARG00000015239	prpf19	100	85.149	Danio_rerio
ENSCJAG00000016509	PRPF19	100	99.603	ENSDNOG00000005797	PRPF19	100	99.603	Dasypus_novemcinctus
ENSCJAG00000016509	PRPF19	100	99.206	ENSDORG00000006906	Prpf19	100	99.206	Dipodomys_ordii
ENSCJAG00000016509	PRPF19	100	65.882	FBgn0261119	Prp19	99	65.882	Drosophila_melanogaster
ENSCJAG00000016509	PRPF19	100	86.706	ENSETEG00000012295	PRPF19	100	86.706	Echinops_telfairi
ENSCJAG00000016509	PRPF19	83	77.143	ENSEBUG00000013075	prpf19	100	77.143	Eptatretus_burgeri
ENSCJAG00000016509	PRPF19	100	98.950	ENSEASG00005008056	PRPF19	98	98.950	Equus_asinus_asinus
ENSCJAG00000016509	PRPF19	100	99.405	ENSECAG00000007322	PRPF19	100	99.405	Equus_caballus
ENSCJAG00000016509	PRPF19	100	78.571	ENSELUG00000004578	prpf19	100	78.571	Esox_lucius
ENSCJAG00000016509	PRPF19	100	84.356	ENSELUG00000020276	-	100	84.356	Esox_lucius
ENSCJAG00000016509	PRPF19	100	99.206	ENSFCAG00000013668	PRPF19	100	99.206	Felis_catus
ENSCJAG00000016509	PRPF19	100	97.024	ENSFALG00000012084	PRPF19	100	97.024	Ficedula_albicollis
ENSCJAG00000016509	PRPF19	84	98.815	ENSFDAG00000009420	PRPF19	96	98.815	Fukomys_damarensis
ENSCJAG00000016509	PRPF19	100	84.554	ENSFHEG00000022135	prpf19	100	84.554	Fundulus_heteroclitus
ENSCJAG00000016509	PRPF19	100	86.139	ENSGMOG00000014756	prpf19	100	86.139	Gadus_morhua
ENSCJAG00000016509	PRPF19	100	97.421	ENSGALG00000036530	PRPF19	100	97.421	Gallus_gallus
ENSCJAG00000016509	PRPF19	100	83.960	ENSGAFG00000008931	prpf19	100	83.960	Gambusia_affinis
ENSCJAG00000016509	PRPF19	100	84.752	ENSGACG00000017976	prpf19	100	84.752	Gasterosteus_aculeatus
ENSCJAG00000016509	PRPF19	100	97.619	ENSGAGG00000013328	PRPF19	100	97.619	Gopherus_agassizii
ENSCJAG00000016509	PRPF19	100	99.802	ENSGGOG00000008648	PRPF19	100	99.802	Gorilla_gorilla
ENSCJAG00000016509	PRPF19	100	84.752	ENSHBUG00000008394	prpf19	100	84.752	Haplochromis_burtoni
ENSCJAG00000016509	PRPF19	100	98.810	ENSHGLG00000003934	PRPF19	100	98.810	Heterocephalus_glaber_female
ENSCJAG00000016509	PRPF19	99	80.430	ENSHGLG00100010649	PRPF19	100	80.080	Heterocephalus_glaber_male
ENSCJAG00000016509	PRPF19	100	83.564	ENSHCOG00000016720	prpf19	100	83.564	Hippocampus_comes
ENSCJAG00000016509	PRPF19	100	85.545	ENSIPUG00000013084	prpf19	100	85.545	Ictalurus_punctatus
ENSCJAG00000016509	PRPF19	100	99.206	ENSSTOG00000001598	PRPF19	100	99.206	Ictidomys_tridecemlineatus
ENSCJAG00000016509	PRPF19	100	99.206	ENSJJAG00000020609	Prpf19	100	99.206	Jaculus_jaculus
ENSCJAG00000016509	PRPF19	100	84.950	ENSKMAG00000010257	prpf19	100	84.950	Kryptolebias_marmoratus
ENSCJAG00000016509	PRPF19	100	85.149	ENSLBEG00000027436	prpf19	100	85.149	Labrus_bergylta
ENSCJAG00000016509	PRPF19	100	90.079	ENSLACG00000003434	PRPF19	100	90.079	Latimeria_chalumnae
ENSCJAG00000016509	PRPF19	91	74.200	ENSLOCG00000008123	prpf19	100	74.200	Lepisosteus_oculatus
ENSCJAG00000016509	PRPF19	100	96.161	ENSLAFG00000002644	PRPF19	100	96.161	Loxodonta_africana
ENSCJAG00000016509	PRPF19	100	99.802	ENSMFAG00000036743	PRPF19	100	99.802	Macaca_fascicularis
ENSCJAG00000016509	PRPF19	100	99.802	ENSMMUG00000014530	PRPF19	100	99.802	Macaca_mulatta
ENSCJAG00000016509	PRPF19	100	99.802	ENSMNEG00000044485	PRPF19	100	99.802	Macaca_nemestrina
ENSCJAG00000016509	PRPF19	100	99.802	ENSMLEG00000043312	PRPF19	100	99.802	Mandrillus_leucophaeus
ENSCJAG00000016509	PRPF19	100	85.149	ENSMAMG00000006843	prpf19	100	85.149	Mastacembelus_armatus
ENSCJAG00000016509	PRPF19	100	84.752	ENSMZEG00005013356	prpf19	100	84.752	Maylandia_zebra
ENSCJAG00000016509	PRPF19	98	90.581	ENSMGAG00000003180	PRPF19	100	90.581	Meleagris_gallopavo
ENSCJAG00000016509	PRPF19	100	98.413	ENSMAUG00000012585	Prpf19	100	98.413	Mesocricetus_auratus
ENSCJAG00000016509	PRPF19	100	99.802	ENSMICG00000011236	PRPF19	100	99.802	Microcebus_murinus
ENSCJAG00000016509	PRPF19	100	99.206	ENSMOCG00000010383	Prpf19	100	99.206	Microtus_ochrogaster
ENSCJAG00000016509	PRPF19	100	84.722	ENSMMOG00000003138	prpf19	100	84.722	Mola_mola
ENSCJAG00000016509	PRPF19	100	99.405	ENSMODG00000020338	PRPF19	100	99.405	Monodelphis_domestica
ENSCJAG00000016509	PRPF19	99	76.608	ENSMALG00000010981	prpf19	99	76.608	Monopterus_albus
ENSCJAG00000016509	PRPF19	100	99.206	MGP_CAROLIEiJ_G0022704	Prpf19	100	99.206	Mus_caroli
ENSCJAG00000016509	PRPF19	100	99.206	ENSMUSG00000024735	Prpf19	100	99.206	Mus_musculus
ENSCJAG00000016509	PRPF19	100	99.206	MGP_PahariEiJ_G0014198	Prpf19	100	99.206	Mus_pahari
ENSCJAG00000016509	PRPF19	100	99.206	MGP_SPRETEiJ_G0023618	Prpf19	100	99.206	Mus_spretus
ENSCJAG00000016509	PRPF19	100	99.206	ENSMPUG00000014432	PRPF19	100	99.206	Mustela_putorius_furo
ENSCJAG00000016509	PRPF19	100	94.798	ENSMLUG00000017597	PRPF19	100	94.798	Myotis_lucifugus
ENSCJAG00000016509	PRPF19	100	98.611	ENSNGAG00000012671	Prpf19	100	98.611	Nannospalax_galili
ENSCJAG00000016509	PRPF19	100	84.752	ENSNBRG00000000055	prpf19	100	84.752	Neolamprologus_brichardi
ENSCJAG00000016509	PRPF19	100	99.802	ENSNLEG00000013618	PRPF19	100	99.802	Nomascus_leucogenys
ENSCJAG00000016509	PRPF19	99	95.573	ENSOPRG00000008630	PRPF19	100	95.573	Ochotona_princeps
ENSCJAG00000016509	PRPF19	100	98.611	ENSODEG00000004043	PRPF19	100	98.611	Octodon_degus
ENSCJAG00000016509	PRPF19	100	84.752	ENSONIG00000004880	prpf19	100	84.752	Oreochromis_niloticus
ENSCJAG00000016509	PRPF19	100	95.810	ENSOCUG00000015689	PRPF19	100	95.810	Oryctolagus_cuniculus
ENSCJAG00000016509	PRPF19	100	84.752	ENSORLG00000004666	prpf19	100	84.752	Oryzias_latipes
ENSCJAG00000016509	PRPF19	100	84.752	ENSORLG00020013561	prpf19	100	84.752	Oryzias_latipes_hni
ENSCJAG00000016509	PRPF19	100	84.752	ENSORLG00015022196	prpf19	100	84.752	Oryzias_latipes_hsok
ENSCJAG00000016509	PRPF19	100	83.960	ENSOMEG00000004424	prpf19	100	83.960	Oryzias_melastigma
ENSCJAG00000016509	PRPF19	100	99.603	ENSOGAG00000016756	PRPF19	100	99.603	Otolemur_garnettii
ENSCJAG00000016509	PRPF19	100	99.603	ENSOARG00000015596	PRPF19	100	99.603	Ovis_aries
ENSCJAG00000016509	PRPF19	99	97.250	ENSPPAG00000030246	PRPF19	100	97.250	Pan_paniscus
ENSCJAG00000016509	PRPF19	100	99.206	ENSPPRG00000002470	PRPF19	100	99.206	Panthera_pardus
ENSCJAG00000016509	PRPF19	99	99.195	ENSPTIG00000006541	PRPF19	99	99.195	Panthera_tigris_altaica
ENSCJAG00000016509	PRPF19	100	99.802	ENSPTRG00000003724	PRPF19	100	99.802	Pan_troglodytes
ENSCJAG00000016509	PRPF19	100	99.802	ENSPANG00000002762	PRPF19	100	99.802	Papio_anubis
ENSCJAG00000016509	PRPF19	100	85.149	ENSPKIG00000019715	prpf19	100	85.149	Paramormyrops_kingsleyae
ENSCJAG00000016509	PRPF19	83	97.136	ENSPSIG00000007497	PRPF19	100	97.136	Pelodiscus_sinensis
ENSCJAG00000016509	PRPF19	100	84.722	ENSPMGG00000017527	prpf19	100	84.722	Periophthalmus_magnuspinnatus
ENSCJAG00000016509	PRPF19	54	31.111	ENSPMGG00000006948	wdr36	54	31.111	Periophthalmus_magnuspinnatus
ENSCJAG00000016509	PRPF19	100	98.016	ENSPEMG00000019270	Prpf19	100	98.016	Peromyscus_maniculatus_bairdii
ENSCJAG00000016509	PRPF19	99	98.929	ENSPCIG00000003485	PRPF19	79	98.929	Phascolarctos_cinereus
ENSCJAG00000016509	PRPF19	100	83.960	ENSPFOG00000002558	prpf19	100	83.960	Poecilia_formosa
ENSCJAG00000016509	PRPF19	100	83.960	ENSPLAG00000017942	prpf19	100	83.960	Poecilia_latipinna
ENSCJAG00000016509	PRPF19	100	83.960	ENSPMEG00000008638	prpf19	100	83.960	Poecilia_mexicana
ENSCJAG00000016509	PRPF19	100	86.136	ENSPREG00000002489	prpf19	96	86.136	Poecilia_reticulata
ENSCJAG00000016509	PRPF19	100	98.144	ENSPPYG00000003202	PRPF19	92	98.144	Pongo_abelii
ENSCJAG00000016509	PRPF19	100	99.206	ENSPCAG00000001930	PRPF19	100	99.206	Procavia_capensis
ENSCJAG00000016509	PRPF19	100	99.788	ENSPCOG00000014017	PRPF19	100	99.788	Propithecus_coquereli
ENSCJAG00000016509	PRPF19	100	99.405	ENSPVAG00000014669	PRPF19	100	99.405	Pteropus_vampyrus
ENSCJAG00000016509	PRPF19	100	84.752	ENSPNYG00000000859	prpf19	100	84.752	Pundamilia_nyererei
ENSCJAG00000016509	PRPF19	100	85.941	ENSPNAG00000019245	prpf19	100	85.941	Pygocentrus_nattereri
ENSCJAG00000016509	PRPF19	100	99.206	ENSRNOG00000020897	Prpf19	100	99.206	Rattus_norvegicus
ENSCJAG00000016509	PRPF19	100	99.802	ENSRBIG00000036672	PRPF19	100	99.802	Rhinopithecus_bieti
ENSCJAG00000016509	PRPF19	100	99.802	ENSRROG00000041572	PRPF19	100	99.802	Rhinopithecus_roxellana
ENSCJAG00000016509	PRPF19	100	100.000	ENSSBOG00000022840	PRPF19	100	100.000	Saimiri_boliviensis_boliviensis
ENSCJAG00000016509	PRPF19	100	99.405	ENSSHAG00000009462	PRPF19	100	99.405	Sarcophilus_harrisii
ENSCJAG00000016509	PRPF19	100	83.333	ENSSFOG00015001236	prpf19	100	83.333	Scleropages_formosus
ENSCJAG00000016509	PRPF19	100	85.545	ENSSMAG00000002273	prpf19	100	85.545	Scophthalmus_maximus
ENSCJAG00000016509	PRPF19	100	85.347	ENSSDUG00000003299	prpf19	100	85.347	Seriola_dumerili
ENSCJAG00000016509	PRPF19	100	85.347	ENSSLDG00000003019	prpf19	100	85.347	Seriola_lalandi_dorsalis
ENSCJAG00000016509	PRPF19	100	96.825	ENSSPUG00000019328	PRPF19	100	96.825	Sphenodon_punctatus
ENSCJAG00000016509	PRPF19	100	85.545	ENSSPAG00000008546	prpf19	100	85.545	Stegastes_partitus
ENSCJAG00000016509	PRPF19	100	99.405	ENSSSCG00000013107	PRPF19	100	99.405	Sus_scrofa
ENSCJAG00000016509	PRPF19	100	97.421	ENSTGUG00000006319	PRPF19	100	97.421	Taeniopygia_guttata
ENSCJAG00000016509	PRPF19	100	84.158	ENSTRUG00000008502	prpf19	100	84.158	Takifugu_rubripes
ENSCJAG00000016509	PRPF19	100	67.723	ENSTNIG00000014219	prpf19	100	67.723	Tetraodon_nigroviridis
ENSCJAG00000016509	PRPF19	100	99.206	ENSTTRG00000012476	PRPF19	100	99.206	Tursiops_truncatus
ENSCJAG00000016509	PRPF19	100	99.206	ENSUAMG00000011280	PRPF19	100	99.206	Ursus_americanus
ENSCJAG00000016509	PRPF19	84	98.815	ENSUMAG00000011609	PRPF19	83	98.815	Ursus_maritimus
ENSCJAG00000016509	PRPF19	99	98.899	ENSVPAG00000010516	PRPF19	100	98.899	Vicugna_pacos
ENSCJAG00000016509	PRPF19	100	99.206	ENSVVUG00000005291	PRPF19	100	99.206	Vulpes_vulpes
ENSCJAG00000016509	PRPF19	100	85.421	ENSXETG00000011938	prpf19	100	85.421	Xenopus_tropicalis
ENSCJAG00000016509	PRPF19	100	83.960	ENSXCOG00000003141	prpf19	100	83.960	Xiphophorus_couchianus
ENSCJAG00000016509	PRPF19	100	84.158	ENSXMAG00000008485	prpf19	100	84.158	Xiphophorus_maculatus