EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000016586 (Gene tree)
Gene ID: 100402399
Gene Symbol: EXOSC1
Alias: CGI-108|CSL4|Csl4p|SKI4|Ski4p|hCsl4p|p13
Full Name: exosome component 1
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 10266 bases
Position: chrNTIC01004446.1:79594692-79604957
Accession: 100402399
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000030543	EXOSC1	PF10447.9	1e-14	1	1
ENSCJAP00000052786	EXOSC1	PF10447.9	3.1e-13	1	1
ENSCJAP00000060663	ECR1_N	PF14382.6	6.5e-09	1	1
ENSCJAP00000052786	ECR1_N	PF14382.6	7.1e-09	1	1
ENSCJAP00000064790	ECR1_N	PF14382.6	8.5e-09	1	1
ENSCJAP00000030543	ECR1_N	PF14382.6	8.8e-09	1	1
ENSCJAP00000030550	ECR1_N	PF14382.6	9.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000074652	EXOSC1-201	495	-	ENSCJAP00000064790	164 (aa)	-	A0A2R8MTM6
ENSCJAT00000068560	EXOSC1-204	513	-	ENSCJAP00000052786	170 (aa)	-	A0A2R8M2R5
ENSCJAT00000067412	EXOSC1-205	465	-	ENSCJAP00000060663	154 (aa)	XP_017834699	A0A2R8MJI2
ENSCJAT00000032276	EXOSC1-202	588	-	ENSCJAP00000030543	195 (aa)	XP_002756540	F6WV46
ENSCJAT00000032283	EXOSC1-203	537	-	ENSCJAP00000030550	178 (aa)	-	F6WU30

Gene Model

Click here to download ENSCJAG00000016586's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000016586's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000016586	EXOSC1	100	98.701	ENSG00000171311	EXOSC1	100	98.235	Homo_sapiens
ENSCJAG00000016586	EXOSC1	98	79.581	ENSAPOG00000007822	exosc1	98	79.581	Acanthochromis_polyacanthus
ENSCJAG00000016586	EXOSC1	100	98.462	ENSAMEG00000000129	EXOSC1	100	98.462	Ailuropoda_melanoleuca
ENSCJAG00000016586	EXOSC1	96	79.255	ENSACIG00000018956	exosc1	92	79.255	Amphilophus_citrinellus
ENSCJAG00000016586	EXOSC1	98	79.581	ENSAOCG00000010699	exosc1	98	79.581	Amphiprion_ocellaris
ENSCJAG00000016586	EXOSC1	91	77.778	ENSAPEG00000012690	exosc1	96	77.778	Amphiprion_percula
ENSCJAG00000016586	EXOSC1	98	79.058	ENSATEG00000018683	exosc1	98	79.058	Anabas_testudineus
ENSCJAG00000016586	EXOSC1	99	86.010	ENSACAG00000002101	EXOSC1	99	86.010	Anolis_carolinensis
ENSCJAG00000016586	EXOSC1	100	100.000	ENSANAG00000034669	EXOSC1	100	100.000	Aotus_nancymaae
ENSCJAG00000016586	EXOSC1	98	79.581	ENSACLG00000021243	exosc1	98	79.581	Astatotilapia_calliptera
ENSCJAG00000016586	EXOSC1	98	81.152	ENSAMXG00000011116	exosc1	98	81.152	Astyanax_mexicanus
ENSCJAG00000016586	EXOSC1	100	97.949	ENSBTAG00000012699	EXOSC1	100	97.949	Bos_taurus
ENSCJAG00000016586	EXOSC1	92	32.979	WBGene00012966	exos-1	90	32.979	Caenorhabditis_elegans
ENSCJAG00000016586	EXOSC1	100	97.949	ENSCAFG00000009068	EXOSC1	94	97.949	Canis_familiaris
ENSCJAG00000016586	EXOSC1	100	97.949	ENSCAFG00020006002	EXOSC1	94	97.949	Canis_lupus_dingo
ENSCJAG00000016586	EXOSC1	100	97.949	ENSCHIG00000015253	EXOSC1	100	97.949	Capra_hircus
ENSCJAG00000016586	EXOSC1	100	97.647	ENSTSYG00000000760	EXOSC1	100	97.647	Carlito_syrichta
ENSCJAG00000016586	EXOSC1	100	98.052	ENSCPOG00000001173	EXOSC1	100	98.052	Cavia_porcellus
ENSCJAG00000016586	EXOSC1	100	62.353	ENSCCAG00000023986	EXOSC1	100	62.353	Cebus_capucinus
ENSCJAG00000016586	EXOSC1	100	98.701	ENSCATG00000034114	EXOSC1	100	98.701	Cercocebus_atys
ENSCJAG00000016586	EXOSC1	100	98.701	ENSCLAG00000002463	EXOSC1	100	98.701	Chinchilla_lanigera
ENSCJAG00000016586	EXOSC1	100	97.436	ENSCSAG00000005870	EXOSC1	100	97.436	Chlorocebus_sabaeus
ENSCJAG00000016586	EXOSC1	96	83.422	ENSCHOG00000006477	EXOSC1	100	83.422	Choloepus_hoffmanni
ENSCJAG00000016586	EXOSC1	68	81.250	ENSCPBG00000011949	EXOSC1	93	81.250	Chrysemys_picta_bellii
ENSCJAG00000016586	EXOSC1	95	55.615	ENSCING00000022734	-	89	55.615	Ciona_intestinalis
ENSCJAG00000016586	EXOSC1	95	57.219	ENSCSAVG00000010865	-	95	57.219	Ciona_savignyi
ENSCJAG00000016586	EXOSC1	100	98.701	ENSCANG00000034159	EXOSC1	100	98.701	Colobus_angolensis_palliatus
ENSCJAG00000016586	EXOSC1	100	98.052	ENSCGRG00001000335	Exosc1	100	98.052	Cricetulus_griseus_chok1gshd
ENSCJAG00000016586	EXOSC1	100	98.052	ENSCGRG00000011602	Exosc1	100	98.052	Cricetulus_griseus_crigri
ENSCJAG00000016586	EXOSC1	98	77.108	ENSCSEG00000007895	exosc1	95	77.108	Cynoglossus_semilaevis
ENSCJAG00000016586	EXOSC1	98	75.916	ENSCVAG00000016748	exosc1	98	75.916	Cyprinodon_variegatus
ENSCJAG00000016586	EXOSC1	98	80.105	ENSDARG00000059841	exosc1	98	80.105	Danio_rerio
ENSCJAG00000016586	EXOSC1	75	97.973	ENSDNOG00000007983	EXOSC1	100	97.973	Dasypus_novemcinctus
ENSCJAG00000016586	EXOSC1	100	97.436	ENSDORG00000016528	Exosc1	100	97.436	Dipodomys_ordii
ENSCJAG00000016586	EXOSC1	94	48.148	FBgn0032346	Csl4	92	48.148	Drosophila_melanogaster
ENSCJAG00000016586	EXOSC1	100	96.923	ENSETEG00000002469	-	100	96.923	Echinops_telfairi
ENSCJAG00000016586	EXOSC1	99	61.735	ENSEBUG00000008164	exosc1	98	61.735	Eptatretus_burgeri
ENSCJAG00000016586	EXOSC1	100	88.830	ENSEASG00005008684	EXOSC1	100	88.830	Equus_asinus_asinus
ENSCJAG00000016586	EXOSC1	99	80.982	ENSECAG00000010621	EXOSC1	99	80.982	Equus_caballus
ENSCJAG00000016586	EXOSC1	100	97.436	ENSEEUG00000005647	EXOSC1	100	97.436	Erinaceus_europaeus
ENSCJAG00000016586	EXOSC1	94	80.435	ENSELUG00000017369	exosc1	97	72.455	Esox_lucius
ENSCJAG00000016586	EXOSC1	100	98.824	ENSFCAG00000040563	EXOSC1	100	98.824	Felis_catus
ENSCJAG00000016586	EXOSC1	100	84.103	ENSFALG00000008450	EXOSC1	100	84.103	Ficedula_albicollis
ENSCJAG00000016586	EXOSC1	100	98.462	ENSFDAG00000000846	EXOSC1	100	98.462	Fukomys_damarensis
ENSCJAG00000016586	EXOSC1	98	75.916	ENSFHEG00000009154	exosc1	98	75.916	Fundulus_heteroclitus
ENSCJAG00000016586	EXOSC1	98	79.581	ENSGMOG00000008993	exosc1	98	79.581	Gadus_morhua
ENSCJAG00000016586	EXOSC1	100	84.118	ENSGALG00000039917	EXOSC1	100	87.671	Gallus_gallus
ENSCJAG00000016586	EXOSC1	98	76.440	ENSGAFG00000010265	exosc1	94	76.440	Gambusia_affinis
ENSCJAG00000016586	EXOSC1	98	79.581	ENSGACG00000018936	exosc1	98	79.581	Gasterosteus_aculeatus
ENSCJAG00000016586	EXOSC1	100	85.641	ENSGAGG00000019192	EXOSC1	100	85.641	Gopherus_agassizii
ENSCJAG00000016586	EXOSC1	100	97.059	ENSGGOG00000003099	EXOSC1	100	97.059	Gorilla_gorilla
ENSCJAG00000016586	EXOSC1	98	79.581	ENSHBUG00000017857	exosc1	98	79.581	Haplochromis_burtoni
ENSCJAG00000016586	EXOSC1	100	98.701	ENSHGLG00000016927	EXOSC1	100	98.701	Heterocephalus_glaber_female
ENSCJAG00000016586	EXOSC1	100	98.701	ENSHGLG00100012208	EXOSC1	100	98.701	Heterocephalus_glaber_male
ENSCJAG00000016586	EXOSC1	98	78.534	ENSHCOG00000019882	exosc1	98	78.534	Hippocampus_comes
ENSCJAG00000016586	EXOSC1	98	80.105	ENSIPUG00000007685	exosc1	98	80.105	Ictalurus_punctatus
ENSCJAG00000016586	EXOSC1	73	85.124	ENSSTOG00000029860	-	93	85.124	Ictidomys_tridecemlineatus
ENSCJAG00000016586	EXOSC1	100	98.701	ENSSTOG00000006615	EXOSC1	100	98.701	Ictidomys_tridecemlineatus
ENSCJAG00000016586	EXOSC1	100	97.436	ENSJJAG00000013311	Exosc1	100	97.436	Jaculus_jaculus
ENSCJAG00000016586	EXOSC1	98	77.604	ENSKMAG00000001202	exosc1	81	77.604	Kryptolebias_marmoratus
ENSCJAG00000016586	EXOSC1	98	79.058	ENSLBEG00000011448	exosc1	98	79.058	Labrus_bergylta
ENSCJAG00000016586	EXOSC1	97	75.000	ENSLOCG00000003776	exosc1	98	75.000	Lepisosteus_oculatus
ENSCJAG00000016586	EXOSC1	100	97.436	ENSLAFG00000015983	EXOSC1	100	97.436	Loxodonta_africana
ENSCJAG00000016586	EXOSC1	100	98.701	ENSMFAG00000001493	EXOSC1	100	98.701	Macaca_fascicularis
ENSCJAG00000016586	EXOSC1	100	98.701	ENSMMUG00000020028	EXOSC1	100	98.701	Macaca_mulatta
ENSCJAG00000016586	EXOSC1	100	98.235	ENSMNEG00000029816	EXOSC1	100	98.235	Macaca_nemestrina
ENSCJAG00000016586	EXOSC1	100	98.701	ENSMLEG00000027643	EXOSC1	100	98.701	Mandrillus_leucophaeus
ENSCJAG00000016586	EXOSC1	98	80.105	ENSMAMG00000012200	exosc1	98	80.105	Mastacembelus_armatus
ENSCJAG00000016586	EXOSC1	98	79.581	ENSMZEG00005007042	exosc1	98	79.581	Maylandia_zebra
ENSCJAG00000016586	EXOSC1	100	98.235	ENSMAUG00000020462	-	100	98.235	Mesocricetus_auratus
ENSCJAG00000016586	EXOSC1	100	98.052	ENSMICG00000007664	EXOSC1	100	98.052	Microcebus_murinus
ENSCJAG00000016586	EXOSC1	97	91.053	ENSMOCG00000017124	-	97	91.053	Microtus_ochrogaster
ENSCJAG00000016586	EXOSC1	100	98.052	ENSMOCG00000006004	-	100	98.052	Microtus_ochrogaster
ENSCJAG00000016586	EXOSC1	99	76.471	ENSMMOG00000021403	exosc1	99	76.471	Mola_mola
ENSCJAG00000016586	EXOSC1	100	92.347	ENSMODG00000004213	EXOSC1	100	92.347	Monodelphis_domestica
ENSCJAG00000016586	EXOSC1	94	80.435	ENSMALG00000007061	exosc1	92	80.435	Monopterus_albus
ENSCJAG00000016586	EXOSC1	100	97.436	MGP_CAROLIEiJ_G0022959	Exosc1	100	97.436	Mus_caroli
ENSCJAG00000016586	EXOSC1	100	98.052	ENSMUSG00000034321	Exosc1	100	98.052	Mus_musculus
ENSCJAG00000016586	EXOSC1	100	98.052	MGP_PahariEiJ_G0014449	Exosc1	100	98.052	Mus_pahari
ENSCJAG00000016586	EXOSC1	100	97.436	MGP_SPRETEiJ_G0023880	Exosc1	100	97.436	Mus_spretus
ENSCJAG00000016586	EXOSC1	100	98.462	ENSMPUG00000017044	EXOSC1	100	98.462	Mustela_putorius_furo
ENSCJAG00000016586	EXOSC1	100	97.949	ENSMLUG00000009228	EXOSC1	100	97.949	Myotis_lucifugus
ENSCJAG00000016586	EXOSC1	100	96.923	ENSNGAG00000022033	Exosc1	100	96.923	Nannospalax_galili
ENSCJAG00000016586	EXOSC1	97	77.333	ENSNBRG00000024007	exosc1	97	77.333	Neolamprologus_brichardi
ENSCJAG00000016586	EXOSC1	100	98.701	ENSNLEG00000013872	EXOSC1	100	98.701	Nomascus_leucogenys
ENSCJAG00000016586	EXOSC1	70	90.435	ENSMEUG00000002246	EXOSC1	100	90.435	Notamacropus_eugenii
ENSCJAG00000016586	EXOSC1	100	97.436	ENSOPRG00000005065	EXOSC1	100	97.436	Ochotona_princeps
ENSCJAG00000016586	EXOSC1	100	98.052	ENSODEG00000016709	EXOSC1	100	98.052	Octodon_degus
ENSCJAG00000016586	EXOSC1	98	79.581	ENSONIG00000017683	exosc1	98	79.581	Oreochromis_niloticus
ENSCJAG00000016586	EXOSC1	68	93.043	ENSOANG00000006563	EXOSC1	100	90.476	Ornithorhynchus_anatinus
ENSCJAG00000016586	EXOSC1	100	96.939	ENSOCUG00000011898	-	100	96.939	Oryctolagus_cuniculus
ENSCJAG00000016586	EXOSC1	100	91.795	ENSOCUG00000026461	-	100	91.795	Oryctolagus_cuniculus
ENSCJAG00000016586	EXOSC1	98	78.125	ENSORLG00000011595	exosc1	98	78.125	Oryzias_latipes
ENSCJAG00000016586	EXOSC1	98	78.125	ENSORLG00020005831	exosc1	98	78.125	Oryzias_latipes_hni
ENSCJAG00000016586	EXOSC1	98	78.125	ENSORLG00015004317	exosc1	98	78.125	Oryzias_latipes_hsok
ENSCJAG00000016586	EXOSC1	97	64.740	ENSOMEG00000013907	exosc1	98	64.740	Oryzias_melastigma
ENSCJAG00000016586	EXOSC1	100	97.436	ENSOGAG00000016259	EXOSC1	100	97.436	Otolemur_garnettii
ENSCJAG00000016586	EXOSC1	100	97.436	ENSOARG00000010136	EXOSC1	100	97.436	Ovis_aries
ENSCJAG00000016586	EXOSC1	100	98.701	ENSPPAG00000039842	EXOSC1	100	98.701	Pan_paniscus
ENSCJAG00000016586	EXOSC1	100	98.824	ENSPPRG00000023366	EXOSC1	100	98.824	Panthera_pardus
ENSCJAG00000016586	EXOSC1	100	98.824	ENSPTIG00000017701	EXOSC1	100	98.824	Panthera_tigris_altaica
ENSCJAG00000016586	EXOSC1	100	98.701	ENSPTRG00000002808	EXOSC1	100	98.701	Pan_troglodytes
ENSCJAG00000016586	EXOSC1	100	98.701	ENSPANG00000021324	EXOSC1	100	98.701	Papio_anubis
ENSCJAG00000016586	EXOSC1	98	80.628	ENSPKIG00000016037	exosc1	98	80.628	Paramormyrops_kingsleyae
ENSCJAG00000016586	EXOSC1	75	82.192	ENSPSIG00000013571	EXOSC1	98	81.818	Pelodiscus_sinensis
ENSCJAG00000016586	EXOSC1	98	77.108	ENSPMGG00000014002	exosc1	98	77.108	Periophthalmus_magnuspinnatus
ENSCJAG00000016586	EXOSC1	100	98.052	ENSPEMG00000010710	-	100	98.052	Peromyscus_maniculatus_bairdii
ENSCJAG00000016586	EXOSC1	95	70.588	ENSPMAG00000000195	exosc1	95	70.588	Petromyzon_marinus
ENSCJAG00000016586	EXOSC1	100	93.333	ENSPCIG00000002210	EXOSC1	99	93.333	Phascolarctos_cinereus
ENSCJAG00000016586	EXOSC1	98	75.916	ENSPFOG00000006755	exosc1	94	75.916	Poecilia_formosa
ENSCJAG00000016586	EXOSC1	98	75.916	ENSPLAG00000005880	exosc1	98	75.916	Poecilia_latipinna
ENSCJAG00000016586	EXOSC1	98	75.916	ENSPMEG00000015598	exosc1	94	75.916	Poecilia_mexicana
ENSCJAG00000016586	EXOSC1	98	74.699	ENSPREG00000000405	exosc1	93	74.699	Poecilia_reticulata
ENSCJAG00000016586	EXOSC1	100	97.436	ENSPPYG00000002531	EXOSC1	100	97.436	Pongo_abelii
ENSCJAG00000016586	EXOSC1	100	97.436	ENSPCAG00000009135	EXOSC1	100	97.436	Procavia_capensis
ENSCJAG00000016586	EXOSC1	100	92.308	ENSPCOG00000027539	EXOSC1	100	92.308	Propithecus_coquereli
ENSCJAG00000016586	EXOSC1	100	98.462	ENSPVAG00000003372	EXOSC1	100	98.462	Pteropus_vampyrus
ENSCJAG00000016586	EXOSC1	98	79.581	ENSPNYG00000021745	exosc1	98	79.581	Pundamilia_nyererei
ENSCJAG00000016586	EXOSC1	99	79.167	ENSPNAG00000001944	exosc1	99	79.167	Pygocentrus_nattereri
ENSCJAG00000016586	EXOSC1	100	98.052	ENSRNOG00000048708	Exosc1	100	98.052	Rattus_norvegicus
ENSCJAG00000016586	EXOSC1	100	98.701	ENSRBIG00000035618	EXOSC1	100	98.701	Rhinopithecus_bieti
ENSCJAG00000016586	EXOSC1	100	98.701	ENSRROG00000032589	EXOSC1	100	98.701	Rhinopithecus_roxellana
ENSCJAG00000016586	EXOSC1	100	99.487	ENSSBOG00000000359	EXOSC1	100	99.487	Saimiri_boliviensis_boliviensis
ENSCJAG00000016586	EXOSC1	75	95.918	ENSSHAG00000018219	EXOSC1	100	95.918	Sarcophilus_harrisii
ENSCJAG00000016586	EXOSC1	98	77.246	ENSSFOG00015016289	-	98	77.368	Scleropages_formosus
ENSCJAG00000016586	EXOSC1	98	82.199	ENSSFOG00015009069	exosc1	98	82.199	Scleropages_formosus
ENSCJAG00000016586	EXOSC1	98	80.105	ENSSMAG00000003721	exosc1	98	80.105	Scophthalmus_maximus
ENSCJAG00000016586	EXOSC1	98	80.105	ENSSDUG00000002993	exosc1	98	80.105	Seriola_dumerili
ENSCJAG00000016586	EXOSC1	98	80.105	ENSSLDG00000025181	exosc1	98	80.105	Seriola_lalandi_dorsalis
ENSCJAG00000016586	EXOSC1	100	84.103	ENSSARG00000000162	EXOSC1	100	84.103	Sorex_araneus
ENSCJAG00000016586	EXOSC1	99	84.021	ENSSPUG00000012263	EXOSC1	99	84.021	Sphenodon_punctatus
ENSCJAG00000016586	EXOSC1	98	78.161	ENSSPAG00000016792	exosc1	82	78.161	Stegastes_partitus
ENSCJAG00000016586	EXOSC1	100	97.436	ENSSSCG00000010518	EXOSC1	91	97.436	Sus_scrofa
ENSCJAG00000016586	EXOSC1	98	82.292	ENSTGUG00000009692	EXOSC1	99	82.292	Taeniopygia_guttata
ENSCJAG00000016586	EXOSC1	97	73.545	ENSTRUG00000007706	exosc1	98	73.545	Takifugu_rubripes
ENSCJAG00000016586	EXOSC1	97	73.438	ENSTNIG00000014079	exosc1	97	73.438	Tetraodon_nigroviridis
ENSCJAG00000016586	EXOSC1	100	89.231	ENSTBEG00000006011	EXOSC1	100	89.231	Tupaia_belangeri
ENSCJAG00000016586	EXOSC1	94	98.370	ENSTTRG00000009887	EXOSC1	100	98.370	Tursiops_truncatus
ENSCJAG00000016586	EXOSC1	100	84.358	ENSUAMG00000010266	EXOSC1	100	84.358	Ursus_americanus
ENSCJAG00000016586	EXOSC1	100	84.358	ENSUMAG00000022002	EXOSC1	100	84.358	Ursus_maritimus
ENSCJAG00000016586	EXOSC1	100	97.949	ENSVVUG00000023192	EXOSC1	63	97.949	Vulpes_vulpes
ENSCJAG00000016586	EXOSC1	98	79.167	ENSXETG00000003434	exosc1	99	79.167	Xenopus_tropicalis
ENSCJAG00000016586	EXOSC1	71	84.167	ENSXCOG00000014499	exosc1	92	84.167	Xiphophorus_couchianus
ENSCJAG00000016586	EXOSC1	98	75.301	ENSXMAG00000023382	exosc1	93	75.301	Xiphophorus_maculatus