EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000016914 (Gene tree)
Gene ID: 100394575
Gene Symbol: HNRNPU
Alias: C1orf199|FLJ30202|FLJ37978|HNRNPU-AS1|HNRPU|NCRNA00201|SAF-A|hnRNPU
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 10834 bases
Position: chrNTIC01010001.1:36024492-36035325
Accession: 100394575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000059509	SAP	PF02037.27	3.5e-10	1	1
ENSCJAP00000061556	SAP	PF02037.27	3.7e-10	1	1
ENSCJAP00000031301	SAP	PF02037.27	4.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000072520	HNRNPU-203	2172	-	ENSCJAP00000059509	723 (aa)	-	A0A2R8MGT0
ENSCJAT00000033094	HNRNPU-204	1638	-	ENSCJAP00000031309	546 (aa)	-	F7I0Z2
ENSCJAT00000080253	HNRNPU-202	2235	-	ENSCJAP00000061556	744 (aa)	-	A0A2R8MLA1
ENSCJAT00000033086	HNRNPU-201	2478	-	ENSCJAP00000031301	825 (aa)	XP_002760895	U3F263

Gene Model

Click here to download ENSCJAG00000016914's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000016914's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000016914	HNRNPU	85	49.920	ENSCJAG00000020106	HNRNPUL1	55	55.248
ENSCJAG00000016914	HNRNPU	74	48.022	ENSCJAG00000018709	-	67	50.397

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000016914	HNRNPU	100	99.636	ENSG00000153187	HNRNPU	100	100.000	Homo_sapiens
ENSCJAG00000016914	HNRNPU	79	77.083	ENSAPOG00000017400	hnrnpub	87	77.083	Acanthochromis_polyacanthus
ENSCJAG00000016914	HNRNPU	99	98.499	ENSAMEG00000009145	HNRNPU	100	95.036	Ailuropoda_melanoleuca
ENSCJAG00000016914	HNRNPU	98	56.276	ENSACIG00000012138	hnrnpub	87	80.952	Amphilophus_citrinellus
ENSCJAG00000016914	HNRNPU	79	75.000	ENSAOCG00000015843	hnrnpub	89	61.538	Amphiprion_ocellaris
ENSCJAG00000016914	HNRNPU	79	75.000	ENSAPEG00000014679	hnrnpub	89	61.538	Amphiprion_percula
ENSCJAG00000016914	HNRNPU	98	56.155	ENSATEG00000016178	hnrnpub	81	60.406	Anabas_testudineus
ENSCJAG00000016914	HNRNPU	80	88.519	ENSACAG00000004511	HNRNPU	79	82.333	Anolis_carolinensis
ENSCJAG00000016914	HNRNPU	100	99.731	ENSANAG00000033895	-	100	99.731	Aotus_nancymaae
ENSCJAG00000016914	HNRNPU	78	83.333	ENSACLG00000008165	hnrnpub	85	83.333	Astatotilapia_calliptera
ENSCJAG00000016914	HNRNPU	100	98.424	ENSBTAG00000007606	HNRNPU	100	98.424	Bos_taurus
ENSCJAG00000016914	HNRNPU	100	96.364	ENSCAFG00020000918	HNRNPU	100	96.364	Canis_lupus_dingo
ENSCJAG00000016914	HNRNPU	100	96.121	ENSCHIG00000004900	HNRNPU	100	96.121	Capra_hircus
ENSCJAG00000016914	HNRNPU	100	97.818	ENSCPOG00000011887	HNRNPU	100	97.818	Cavia_porcellus
ENSCJAG00000016914	HNRNPU	100	99.585	ENSCCAG00000037859	-	100	99.585	Cebus_capucinus
ENSCJAG00000016914	HNRNPU	100	99.585	ENSCATG00000035273	HNRNPU	100	99.585	Cercocebus_atys
ENSCJAG00000016914	HNRNPU	100	98.061	ENSCLAG00000007100	HNRNPU	100	98.061	Chinchilla_lanigera
ENSCJAG00000016914	HNRNPU	100	97.212	ENSCSAG00000009219	HNRNPU	100	97.212	Chlorocebus_sabaeus
ENSCJAG00000016914	HNRNPU	84	100.000	ENSCHOG00000001387	HNRNPU	79	100.000	Choloepus_hoffmanni
ENSCJAG00000016914	HNRNPU	97	87.523	ENSCPBG00000009415	HNRNPU	88	91.129	Chrysemys_picta_bellii
ENSCJAG00000016914	HNRNPU	100	98.212	ENSCANG00000022780	HNRNPU	100	98.212	Colobus_angolensis_palliatus
ENSCJAG00000016914	HNRNPU	99	98.496	ENSCGRG00001020525	Hnrnpu	100	93.818	Cricetulus_griseus_chok1gshd
ENSCJAG00000016914	HNRNPU	94	53.997	ENSCSEG00000010804	hnrnpub	89	64.062	Cynoglossus_semilaevis
ENSCJAG00000016914	HNRNPU	79	71.429	ENSCVAG00000004280	hnrnpub	85	71.429	Cyprinodon_variegatus
ENSCJAG00000016914	HNRNPU	78	62.319	ENSDARG00000015206	hnrnpua	89	62.319	Danio_rerio
ENSCJAG00000016914	HNRNPU	77	85.714	ENSDARG00000004735	hnrnpub	90	59.459	Danio_rerio
ENSCJAG00000016914	HNRNPU	100	79.843	ENSDNOG00000000215	HNRNPU	88	100.000	Dasypus_novemcinctus
ENSCJAG00000016914	HNRNPU	99	91.090	ENSDORG00000015491	Hnrnpu	100	90.303	Dipodomys_ordii
ENSCJAG00000016914	HNRNPU	96	98.308	ENSETEG00000014565	HNRNPU	100	90.667	Echinops_telfairi
ENSCJAG00000016914	HNRNPU	100	95.758	ENSEASG00005003017	HNRNPU	100	95.758	Equus_asinus_asinus
ENSCJAG00000016914	HNRNPU	100	95.515	ENSECAG00000007955	HNRNPU	100	95.515	Equus_caballus
ENSCJAG00000016914	HNRNPU	98	57.766	ENSELUG00000010733	hnrnpub	63	65.162	Esox_lucius
ENSCJAG00000016914	HNRNPU	99	47.321	ENSELUG00000011966	hnrnpua	88	65.079	Esox_lucius
ENSCJAG00000016914	HNRNPU	100	98.253	ENSFCAG00000002156	HNRNPU	100	98.253	Felis_catus
ENSCJAG00000016914	HNRNPU	99	93.825	ENSFDAG00000006026	HNRNPU	100	98.653	Fukomys_damarensis
ENSCJAG00000016914	HNRNPU	80	69.643	ENSFHEG00000022639	hnrnpub	88	66.667	Fundulus_heteroclitus
ENSCJAG00000016914	HNRNPU	92	57.246	ENSGMOG00000001755	hnrnpub	77	60.561	Gadus_morhua
ENSCJAG00000016914	HNRNPU	97	87.175	ENSGALG00000010671	HNRNPU	100	77.086	Gallus_gallus
ENSCJAG00000016914	HNRNPU	62	78.261	ENSGAFG00000009369	hnrnpub	84	78.261	Gambusia_affinis
ENSCJAG00000016914	HNRNPU	78	74.000	ENSGACG00000004679	hnrnpub	72	77.083	Gasterosteus_aculeatus
ENSCJAG00000016914	HNRNPU	100	99.152	ENSGGOG00000004061	HNRNPU	100	99.152	Gorilla_gorilla
ENSCJAG00000016914	HNRNPU	78	83.333	ENSHBUG00000012290	hnrnpub	85	83.333	Haplochromis_burtoni
ENSCJAG00000016914	HNRNPU	100	96.140	ENSHGLG00000010594	-	100	96.140	Heterocephalus_glaber_female
ENSCJAG00000016914	HNRNPU	85	97.302	ENSHGLG00100015093	HNRNPU	100	98.344	Heterocephalus_glaber_male
ENSCJAG00000016914	HNRNPU	77	83.333	ENSHCOG00000020091	hnrnpub	83	79.545	Hippocampus_comes
ENSCJAG00000016914	HNRNPU	80	78.261	ENSIPUG00000007749	hnrnpu	92	72.549	Ictalurus_punctatus
ENSCJAG00000016914	HNRNPU	99	98.684	ENSJJAG00000011371	Hnrnpu	100	96.252	Jaculus_jaculus
ENSCJAG00000016914	HNRNPU	95	53.455	ENSKMAG00000004532	hnrnpub	88	59.155	Kryptolebias_marmoratus
ENSCJAG00000016914	HNRNPU	82	58.667	ENSLBEG00000022520	hnrnpub	87	61.194	Labrus_bergylta
ENSCJAG00000016914	HNRNPU	99	60.885	ENSLACG00000017463	HNRNPU	83	68.000	Latimeria_chalumnae
ENSCJAG00000016914	HNRNPU	82	80.435	ENSLOCG00000016652	hnrnpua	85	66.044	Lepisosteus_oculatus
ENSCJAG00000016914	HNRNPU	100	97.576	ENSLAFG00000021377	HNRNPU	100	97.576	Loxodonta_africana
ENSCJAG00000016914	HNRNPU	100	99.585	ENSMFAG00000037308	HNRNPU	100	99.585	Macaca_fascicularis
ENSCJAG00000016914	HNRNPU	100	97.212	ENSMMUG00000021098	HNRNPU	100	97.212	Macaca_mulatta
ENSCJAG00000016914	HNRNPU	100	99.585	ENSMNEG00000043645	HNRNPU	100	99.585	Macaca_nemestrina
ENSCJAG00000016914	HNRNPU	98	55.862	ENSMAMG00000007196	hnrnpub	86	73.077	Mastacembelus_armatus
ENSCJAG00000016914	HNRNPU	78	83.333	ENSMZEG00005003185	hnrnpub	85	83.333	Maylandia_zebra
ENSCJAG00000016914	HNRNPU	99	98.496	ENSMAUG00000008842	Hnrnpu	100	93.939	Mesocricetus_auratus
ENSCJAG00000016914	HNRNPU	100	98.545	ENSMICG00000004616	HNRNPU	100	98.545	Microcebus_murinus
ENSCJAG00000016914	HNRNPU	99	98.308	ENSMOCG00000015623	Hnrnpu	100	93.818	Microtus_ochrogaster
ENSCJAG00000016914	HNRNPU	100	90.706	ENSMODG00000006515	HNRNPU	100	92.588	Monodelphis_domestica
ENSCJAG00000016914	HNRNPU	76	70.588	ENSMALG00000018243	hnrnpub	84	61.149	Monopterus_albus
ENSCJAG00000016914	HNRNPU	100	93.947	MGP_CAROLIEiJ_G0014962	Hnrnpu	100	93.947	Mus_caroli
ENSCJAG00000016914	HNRNPU	100	94.068	ENSMUSG00000039630	Hnrnpu	100	94.068	Mus_musculus
ENSCJAG00000016914	HNRNPU	100	93.229	MGP_PahariEiJ_G0028193	Hnrnpu	100	93.229	Mus_pahari
ENSCJAG00000016914	HNRNPU	100	94.068	MGP_SPRETEiJ_G0015761	Hnrnpu	100	94.068	Mus_spretus
ENSCJAG00000016914	HNRNPU	92	96.623	ENSMLUG00000000475	HNRNPU	85	96.623	Myotis_lucifugus
ENSCJAG00000016914	HNRNPU	100	94.182	ENSNGAG00000019075	Hnrnpu	100	94.182	Nannospalax_galili
ENSCJAG00000016914	HNRNPU	78	83.333	ENSNBRG00000017855	hnrnpub	85	83.333	Neolamprologus_brichardi
ENSCJAG00000016914	HNRNPU	99	87.923	ENSMEUG00000000541	HNRNPU	100	89.734	Notamacropus_eugenii
ENSCJAG00000016914	HNRNPU	70	97.087	ENSODEG00000014458	-	100	97.087	Octodon_degus
ENSCJAG00000016914	HNRNPU	78	83.333	ENSONIG00000001260	hnrnpub	88	83.333	Oreochromis_niloticus
ENSCJAG00000016914	HNRNPU	98	98.267	ENSOCUG00000014469	HNRNPU	93	98.267	Oryctolagus_cuniculus
ENSCJAG00000016914	HNRNPU	79	78.261	ENSORLG00000016114	hnrnpub	86	83.333	Oryzias_latipes
ENSCJAG00000016914	HNRNPU	79	78.261	ENSORLG00020005363	hnrnpub	86	83.333	Oryzias_latipes_hni
ENSCJAG00000016914	HNRNPU	79	78.261	ENSORLG00015001190	hnrnpub	86	83.333	Oryzias_latipes_hsok
ENSCJAG00000016914	HNRNPU	79	78.261	ENSOMEG00000014951	hnrnpub	86	83.333	Oryzias_melastigma
ENSCJAG00000016914	HNRNPU	100	96.121	ENSOGAG00000014024	HNRNPU	100	96.121	Otolemur_garnettii
ENSCJAG00000016914	HNRNPU	81	100.000	ENSOARG00000004985	HNRNPU	91	98.658	Ovis_aries
ENSCJAG00000016914	HNRNPU	100	99.636	ENSPPAG00000038652	HNRNPU	100	99.636	Pan_paniscus
ENSCJAG00000016914	HNRNPU	100	98.424	ENSPPRG00000002662	HNRNPU	100	98.424	Panthera_pardus
ENSCJAG00000016914	HNRNPU	100	99.636	ENSPTRG00000002182	HNRNPU	100	99.636	Pan_troglodytes
ENSCJAG00000016914	HNRNPU	100	99.585	ENSPANG00000011643	HNRNPU	100	99.585	Papio_anubis
ENSCJAG00000016914	HNRNPU	98	60.411	ENSPKIG00000006885	hnrnpua	78	66.348	Paramormyrops_kingsleyae
ENSCJAG00000016914	HNRNPU	98	60.408	ENSPKIG00000022332	hnrnpub	87	58.402	Paramormyrops_kingsleyae
ENSCJAG00000016914	HNRNPU	100	93.914	ENSPCIG00000008657	HNRNPU	100	94.033	Phascolarctos_cinereus
ENSCJAG00000016914	HNRNPU	81	64.062	ENSPFOG00000002908	hnrnpub	89	60.811	Poecilia_formosa
ENSCJAG00000016914	HNRNPU	81	64.062	ENSPLAG00000004160	hnrnpub	89	60.811	Poecilia_latipinna
ENSCJAG00000016914	HNRNPU	100	98.667	ENSPCOG00000018655	-	100	98.667	Propithecus_coquereli
ENSCJAG00000016914	HNRNPU	100	91.636	ENSPCOG00000003883	-	100	91.879	Propithecus_coquereli
ENSCJAG00000016914	HNRNPU	100	98.182	ENSPVAG00000002581	HNRNPU	100	98.182	Pteropus_vampyrus
ENSCJAG00000016914	HNRNPU	78	83.333	ENSPNYG00000021642	hnrnpub	85	83.333	Pundamilia_nyererei
ENSCJAG00000016914	HNRNPU	98	61.373	ENSPNAG00000001055	hnrnpub	79	64.241	Pygocentrus_nattereri
ENSCJAG00000016914	HNRNPU	100	93.697	ENSRNOG00000033790	Hnrnpu	100	93.697	Rattus_norvegicus
ENSCJAG00000016914	HNRNPU	100	98.617	ENSRBIG00000031519	HNRNPU	100	98.617	Rhinopithecus_bieti
ENSCJAG00000016914	HNRNPU	100	98.762	ENSRROG00000041642	HNRNPU	100	98.762	Rhinopithecus_roxellana
ENSCJAG00000016914	HNRNPU	98	61.642	ENSSFOG00015001124	hnrnpub	65	70.741	Scleropages_formosus
ENSCJAG00000016914	HNRNPU	98	61.104	ENSSFOG00015019004	hnrnpu	77	67.252	Scleropages_formosus
ENSCJAG00000016914	HNRNPU	73	70.588	ENSSMAG00000003607	hnrnpub	83	70.588	Scophthalmus_maximus
ENSCJAG00000016914	HNRNPU	79	70.588	ENSSDUG00000005912	hnrnpub	85	70.588	Seriola_dumerili
ENSCJAG00000016914	HNRNPU	79	70.588	ENSSLDG00000004899	hnrnpub	85	70.588	Seriola_lalandi_dorsalis
ENSCJAG00000016914	HNRNPU	97	90.619	ENSSPUG00000011393	HNRNPU	90	90.244	Sphenodon_punctatus
ENSCJAG00000016914	HNRNPU	73	78.261	ENSSPAG00000011853	hnrnpub	86	78.261	Stegastes_partitus
ENSCJAG00000016914	HNRNPU	100	98.667	ENSSSCG00000010877	HNRNPU	100	98.667	Sus_scrofa
ENSCJAG00000016914	HNRNPU	99	55.405	ENSTRUG00000007759	hnrnpub	85	64.706	Takifugu_rubripes
ENSCJAG00000016914	HNRNPU	99	51.309	ENSTNIG00000009725	hnrnpub	90	68.085	Tetraodon_nigroviridis
ENSCJAG00000016914	HNRNPU	71	100.000	ENSTTRG00000005281	HNRNPU	71	100.000	Tursiops_truncatus
ENSCJAG00000016914	HNRNPU	100	98.909	ENSUAMG00000021120	HNRNPU	100	98.909	Ursus_americanus
ENSCJAG00000016914	HNRNPU	98	89.650	ENSUMAG00000012322	HNRNPU	97	98.020	Ursus_maritimus
ENSCJAG00000016914	HNRNPU	86	98.198	ENSVPAG00000010520	HNRNPU	91	98.198	Vicugna_pacos
ENSCJAG00000016914	HNRNPU	100	96.364	ENSVVUG00000026524	HNRNPU	100	96.364	Vulpes_vulpes
ENSCJAG00000016914	HNRNPU	99	75.588	ENSXETG00000011386	hnrnpu	99	66.981	Xenopus_tropicalis
ENSCJAG00000016914	HNRNPU	99	46.282	ENSXMAG00000010356	hnrnpub	97	78.261	Xiphophorus_maculatus