EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000017081 (Gene tree)
Gene ID: 100407170
Gene Symbol: SAFB
Alias: HET|SAFB1
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 42224 bases
Position: chrNTIC01011113.1:3285208-3327431
Accession: 10520
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000031735	RRM_5	PF13893.6	2.1e-07	1	1
ENSCJAP00000031598	RRM_5	PF13893.6	3.1e-07	1	1
ENSCJAP00000031735	RRM_1	PF00076.22	2.6e-13	1	1
ENSCJAP00000031598	RRM_1	PF00076.22	3.8e-13	1	1
ENSCJAP00000031598	SAP	PF02037.27	8.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000033545	SAFB-202	1611	-	ENSCJAP00000031735	536 (aa)	-	F7HY87
ENSCJAT00000033401	SAFB-201	2277	-	ENSCJAP00000031598	758 (aa)	-	F7IP94

Gene Model

Click here to download ENSCJAG00000017081's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000017081's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000017081	SAFB	100	98.881	ENSG00000160633	SAFB	100	93.464	Homo_sapiens
ENSCJAG00000017081	SAFB	100	93.889	ENSAMEG00000012254	SAFB	81	95.745	Ailuropoda_melanoleuca
ENSCJAG00000017081	SAFB	93	45.709	ENSACIG00000006247	safb	54	53.498	Amphilophus_citrinellus
ENSCJAG00000017081	SAFB	93	67.437	ENSAPLG00000006355	-	82	67.103	Anas_platyrhynchos
ENSCJAG00000017081	SAFB	99	70.018	ENSAPLG00000005780	-	83	68.206	Anas_platyrhynchos
ENSCJAG00000017081	SAFB	73	59.701	ENSACAG00000016893	-	73	61.408	Anolis_carolinensis
ENSCJAG00000017081	SAFB	100	99.528	ENSANAG00000028821	SAFB	89	99.024	Aotus_nancymaae
ENSCJAG00000017081	SAFB	84	53.684	ENSAMXG00000018154	safb	66	61.538	Astyanax_mexicanus
ENSCJAG00000017081	SAFB	100	94.811	ENSBTAG00000007875	SAFB	83	94.811	Bos_taurus
ENSCJAG00000017081	SAFB	100	96.226	ENSCAFG00000018803	SAFB	78	96.226	Canis_familiaris
ENSCJAG00000017081	SAFB	100	96.226	ENSCAFG00020018943	SAFB	83	96.226	Canis_lupus_dingo
ENSCJAG00000017081	SAFB	100	93.868	ENSCHIG00000007262	SAFB	99	92.523	Capra_hircus
ENSCJAG00000017081	SAFB	99	80.748	ENSTSYG00000001851	-	100	77.615	Carlito_syrichta
ENSCJAG00000017081	SAFB	81	90.086	ENSCAPG00000012121	SAFB	54	91.946	Cavia_aperea
ENSCJAG00000017081	SAFB	100	92.453	ENSCPOG00000026322	SAFB	81	92.453	Cavia_porcellus
ENSCJAG00000017081	SAFB	100	100.000	ENSCCAG00000020193	SAFB	89	98.537	Cebus_capucinus
ENSCJAG00000017081	SAFB	100	99.440	ENSCATG00000029994	SAFB	88	98.113	Cercocebus_atys
ENSCJAG00000017081	SAFB	100	95.283	ENSCLAG00000007734	SAFB	94	95.283	Chinchilla_lanigera
ENSCJAG00000017081	SAFB	100	99.067	ENSCSAG00000009949	SAFB	88	98.113	Chlorocebus_sabaeus
ENSCJAG00000017081	SAFB	88	92.857	ENSCHOG00000003208	SAFB	82	77.425	Choloepus_hoffmanni
ENSCJAG00000017081	SAFB	99	69.118	ENSCPBG00000010928	-	81	66.546	Chrysemys_picta_bellii
ENSCJAG00000017081	SAFB	99	65.357	ENSCPBG00000010936	-	82	64.510	Chrysemys_picta_bellii
ENSCJAG00000017081	SAFB	100	93.284	ENSCANG00000019754	-	89	88.277	Colobus_angolensis_palliatus
ENSCJAG00000017081	SAFB	100	98.585	ENSCANG00000004774	-	88	97.849	Colobus_angolensis_palliatus
ENSCJAG00000017081	SAFB	100	90.520	ENSCGRG00001002254	Safb	81	87.114	Cricetulus_griseus_chok1gshd
ENSCJAG00000017081	SAFB	100	90.520	ENSCGRG00000011529	Safb	77	87.114	Cricetulus_griseus_crigri
ENSCJAG00000017081	SAFB	93	50.299	ENSCSEG00000019870	safb	69	41.634	Cynoglossus_semilaevis
ENSCJAG00000017081	SAFB	92	45.294	ENSCVAG00000002226	safb	76	48.718	Cyprinodon_variegatus
ENSCJAG00000017081	SAFB	87	58.537	ENSDARG00000020467	safb	86	46.885	Danio_rerio
ENSCJAG00000017081	SAFB	100	95.755	ENSDNOG00000015746	SAFB	75	95.302	Dasypus_novemcinctus
ENSCJAG00000017081	SAFB	100	88.679	ENSDORG00000016200	Safb	83	88.679	Dipodomys_ordii
ENSCJAG00000017081	SAFB	79	85.915	ENSETEG00000018679	SAFB	62	86.667	Echinops_telfairi
ENSCJAG00000017081	SAFB	100	92.764	ENSEASG00005023019	SAFB	88	86.933	Equus_asinus_asinus
ENSCJAG00000017081	SAFB	100	94.413	ENSECAG00000018659	SAFB	74	91.455	Equus_caballus
ENSCJAG00000017081	SAFB	92	47.683	ENSELUG00000022327	safb	69	46.014	Esox_lucius
ENSCJAG00000017081	SAFB	100	96.226	ENSFCAG00000011835	SAFB	90	96.226	Felis_catus
ENSCJAG00000017081	SAFB	99	62.657	ENSFALG00000013881	-	83	63.230	Ficedula_albicollis
ENSCJAG00000017081	SAFB	99	70.275	ENSFALG00000013882	-	75	66.372	Ficedula_albicollis
ENSCJAG00000017081	SAFB	100	92.925	ENSFDAG00000020306	SAFB	78	92.925	Fukomys_damarensis
ENSCJAG00000017081	SAFB	78	57.265	ENSFHEG00000004219	safb	57	46.328	Fundulus_heteroclitus
ENSCJAG00000017081	SAFB	99	69.358	ENSGALG00000013365	-	81	66.667	Gallus_gallus
ENSCJAG00000017081	SAFB	99	65.653	ENSGALG00000001948	-	82	66.261	Gallus_gallus
ENSCJAG00000017081	SAFB	93	45.331	ENSGAFG00000016162	safb	52	53.462	Gambusia_affinis
ENSCJAG00000017081	SAFB	99	63.971	ENSGAGG00000017702	-	82	61.607	Gopherus_agassizii
ENSCJAG00000017081	SAFB	94	66.792	ENSGAGG00000008424	-	97	65.849	Gopherus_agassizii
ENSCJAG00000017081	SAFB	100	98.585	ENSGGOG00000015109	SAFB	89	98.049	Gorilla_gorilla
ENSCJAG00000017081	SAFB	100	94.340	ENSHGLG00000015883	SAFB	94	94.340	Heterocephalus_glaber_female
ENSCJAG00000017081	SAFB	100	94.340	ENSHGLG00100004228	SAFB	70	94.340	Heterocephalus_glaber_male
ENSCJAG00000017081	SAFB	92	53.320	ENSIPUG00000024869	safb2	72	59.836	Ictalurus_punctatus
ENSCJAG00000017081	SAFB	100	92.007	ENSSTOG00000002783	SAFB	93	93.289	Ictidomys_tridecemlineatus
ENSCJAG00000017081	SAFB	100	91.264	ENSJJAG00000009021	Safb	86	87.387	Jaculus_jaculus
ENSCJAG00000017081	SAFB	83	52.814	ENSKMAG00000022308	safb	55	51.600	Kryptolebias_marmoratus
ENSCJAG00000017081	SAFB	56	59.140	ENSLACG00000018090	SAFB	81	57.383	Latimeria_chalumnae
ENSCJAG00000017081	SAFB	90	62.745	ENSLOCG00000003613	safb	50	62.092	Lepisosteus_oculatus
ENSCJAG00000017081	SAFB	99	94.366	ENSLAFG00000003840	SAFB	84	94.366	Loxodonta_africana
ENSCJAG00000017081	SAFB	100	99.440	ENSMFAG00000003885	SAFB	89	97.561	Macaca_fascicularis
ENSCJAG00000017081	SAFB	100	99.440	ENSMMUG00000017970	SAFB	89	97.561	Macaca_mulatta
ENSCJAG00000017081	SAFB	100	97.561	ENSMNEG00000035637	SAFB	89	97.561	Macaca_nemestrina
ENSCJAG00000017081	SAFB	100	97.561	ENSMLEG00000038637	SAFB	89	97.561	Mandrillus_leucophaeus
ENSCJAG00000017081	SAFB	84	67.749	ENSMGAG00000001051	-	78	69.913	Meleagris_gallopavo
ENSCJAG00000017081	SAFB	99	69.174	ENSMGAG00000001101	-	83	66.132	Meleagris_gallopavo
ENSCJAG00000017081	SAFB	91	90.369	ENSMAUG00000005013	Safb	100	90.369	Mesocricetus_auratus
ENSCJAG00000017081	SAFB	100	94.413	ENSMICG00000008739	-	84	92.925	Microcebus_murinus
ENSCJAG00000017081	SAFB	82	85.787	ENSMICG00000046795	-	98	92.553	Microcebus_murinus
ENSCJAG00000017081	SAFB	100	89.963	ENSMOCG00000014040	Safb	81	86.570	Microtus_ochrogaster
ENSCJAG00000017081	SAFB	100	77.778	ENSMODG00000001236	SAFB	88	79.581	Monodelphis_domestica
ENSCJAG00000017081	SAFB	100	90.149	MGP_CAROLIEiJ_G0021780	Safb	82	85.638	Mus_caroli
ENSCJAG00000017081	SAFB	100	90.149	ENSMUSG00000071054	Safb	82	85.638	Mus_musculus
ENSCJAG00000017081	SAFB	100	89.405	MGP_PahariEiJ_G0020769	Safb	95	85.222	Mus_pahari
ENSCJAG00000017081	SAFB	100	95.283	ENSMPUG00000006123	SAFB	78	95.283	Mustela_putorius_furo
ENSCJAG00000017081	SAFB	100	94.340	ENSMLUG00000001081	SAFB	83	94.340	Myotis_lucifugus
ENSCJAG00000017081	SAFB	99	88.082	ENSNGAG00000019882	Safb	81	86.703	Nannospalax_galili
ENSCJAG00000017081	SAFB	99	98.113	ENSNLEG00000013551	SAFB	88	98.113	Nomascus_leucogenys
ENSCJAG00000017081	SAFB	92	88.866	ENSOPRG00000011561	-	80	86.879	Ochotona_princeps
ENSCJAG00000017081	SAFB	100	94.811	ENSODEG00000014838	SAFB	94	94.811	Octodon_degus
ENSCJAG00000017081	SAFB	100	80.222	ENSOCUG00000014628	SAFB	55	86.179	Oryctolagus_cuniculus
ENSCJAG00000017081	SAFB	100	91.981	ENSOGAG00000027769	SAFB	95	91.981	Otolemur_garnettii
ENSCJAG00000017081	SAFB	74	89.262	ENSOARG00000007856	-	77	89.262	Ovis_aries
ENSCJAG00000017081	SAFB	100	93.868	ENSOARG00000007662	-	83	93.868	Ovis_aries
ENSCJAG00000017081	SAFB	100	98.694	ENSPPAG00000035129	SAFB	89	98.585	Pan_paniscus
ENSCJAG00000017081	SAFB	100	96.226	ENSPPRG00000017197	SAFB	90	96.226	Panthera_pardus
ENSCJAG00000017081	SAFB	100	98.694	ENSPTRG00000010335	SAFB	89	98.585	Pan_troglodytes
ENSCJAG00000017081	SAFB	100	99.440	ENSPANG00000007770	SAFB	89	97.561	Papio_anubis
ENSCJAG00000017081	SAFB	89	51.875	ENSPKIG00000009902	safb	56	56.338	Paramormyrops_kingsleyae
ENSCJAG00000017081	SAFB	99	64.779	ENSPSIG00000009367	-	81	66.489	Pelodiscus_sinensis
ENSCJAG00000017081	SAFB	99	66.250	ENSPSIG00000011679	-	82	67.949	Pelodiscus_sinensis
ENSCJAG00000017081	SAFB	100	89.777	ENSPEMG00000020428	Safb	81	86.933	Peromyscus_maniculatus_bairdii
ENSCJAG00000017081	SAFB	100	80.847	ENSPCIG00000009504	-	99	82.400	Phascolarctos_cinereus
ENSCJAG00000017081	SAFB	93	44.922	ENSPFOG00000007745	safb	77	48.911	Poecilia_formosa
ENSCJAG00000017081	SAFB	93	44.922	ENSPLAG00000001614	safb	78	48.911	Poecilia_latipinna
ENSCJAG00000017081	SAFB	93	44.922	ENSPMEG00000021023	safb	82	48.911	Poecilia_mexicana
ENSCJAG00000017081	SAFB	93	45.312	ENSPREG00000012496	safb	52	53.462	Poecilia_reticulata
ENSCJAG00000017081	SAFB	100	98.694	ENSPPYG00000009428	SAFB	88	98.585	Pongo_abelii
ENSCJAG00000017081	SAFB	100	94.340	ENSPCAG00000006475	SAFB	84	94.340	Procavia_capensis
ENSCJAG00000017081	SAFB	100	88.519	ENSPCOG00000014090	SAFB	97	81.481	Propithecus_coquereli
ENSCJAG00000017081	SAFB	100	85.874	ENSPVAG00000004913	SAFB	83	82.577	Pteropus_vampyrus
ENSCJAG00000017081	SAFB	90	52.500	ENSPNAG00000021838	safb	74	56.522	Pygocentrus_nattereri
ENSCJAG00000017081	SAFB	100	89.610	ENSRNOG00000050543	Safb	81	87.138	Rattus_norvegicus
ENSCJAG00000017081	SAFB	98	97.573	ENSRBIG00000042509	SAFB	88	97.849	Rhinopithecus_bieti
ENSCJAG00000017081	SAFB	100	99.254	ENSRROG00000029278	SAFB	88	98.585	Rhinopithecus_roxellana
ENSCJAG00000017081	SAFB	100	100.000	ENSSBOG00000026291	SAFB	88	99.057	Saimiri_boliviensis_boliviensis
ENSCJAG00000017081	SAFB	94	61.594	ENSSFOG00015008156	safb	55	61.594	Scleropages_formosus
ENSCJAG00000017081	SAFB	95	51.756	ENSSDUG00000009652	safb	63	42.694	Seriola_dumerili
ENSCJAG00000017081	SAFB	100	86.592	ENSSARG00000010475	SAFB	81	86.577	Sorex_araneus
ENSCJAG00000017081	SAFB	92	62.450	ENSSPUG00000009747	-	84	60.985	Sphenodon_punctatus
ENSCJAG00000017081	SAFB	100	94.052	ENSSSCG00000013522	SAFB	79	95.283	Sus_scrofa
ENSCJAG00000017081	SAFB	91	63.938	ENSTGUG00000000489	-	80	67.578	Taeniopygia_guttata
ENSCJAG00000017081	SAFB	93	70.727	ENSTGUG00000000502	-	81	67.170	Taeniopygia_guttata
ENSCJAG00000017081	SAFB	82	50.216	ENSTRUG00000003567	safb	71	52.323	Takifugu_rubripes
ENSCJAG00000017081	SAFB	85	53.813	ENSTNIG00000015470	safb	77	53.913	Tetraodon_nigroviridis
ENSCJAG00000017081	SAFB	63	100.000	ENSTBEG00000013124	-	50	91.729	Tupaia_belangeri
ENSCJAG00000017081	SAFB	100	91.806	ENSTTRG00000013588	SAFB	75	98.413	Tursiops_truncatus
ENSCJAG00000017081	SAFB	100	94.424	ENSUAMG00000024543	SAFB	69	94.424	Ursus_americanus
ENSCJAG00000017081	SAFB	85	93.004	ENSUMAG00000009734	SAFB	84	92.885	Ursus_maritimus
ENSCJAG00000017081	SAFB	87	93.846	ENSVPAG00000012043	SAFB	73	90.774	Vicugna_pacos
ENSCJAG00000017081	SAFB	100	96.226	ENSVVUG00000013720	SAFB	78	96.226	Vulpes_vulpes
ENSCJAG00000017081	SAFB	59	52.575	ENSXETG00000008755	safb	92	54.383	Xenopus_tropicalis
ENSCJAG00000017081	SAFB	95	44.403	ENSXMAG00000003458	safb	51	53.077	Xiphophorus_maculatus