EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000017177 (Gene tree)
Gene ID: 100408355
Gene Symbol: SRFBP1
Alias: BUD22|FLJ25286|Rlb1|STRAP|p49
Full Name: serum response factor binding protein 1
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 64727 bases
Position: chrNTIC01011112.1:116742230-116806956
Accession: 26333
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000031572	BUD22	PF09073.10	6.8e-11	1	1
ENSCJAP00000059634	BUD22	PF09073.10	7.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000033375	SRFBP1-201	1290	-	ENSCJAP00000031572	429 (aa)	-	U3FTM4
ENSCJAT00000085932	SRFBP1-202	1245	-	ENSCJAP00000059634	414 (aa)	-	A0A2R8MH13

Gene Model

Click here to download ENSCJAG00000017177's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000017177's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000017177	SRFBP1	100	90.210	ENSG00000151304	SRFBP1	100	90.210	Homo_sapiens
ENSCJAG00000017177	SRFBP1	100	76.798	ENSAMEG00000018050	SRFBP1	100	77.030	Ailuropoda_melanoleuca
ENSCJAG00000017177	SRFBP1	99	39.171	ENSACIG00000019127	-	99	41.109	Amphilophus_citrinellus
ENSCJAG00000017177	SRFBP1	73	76.667	ENSAOCG00000002182	-	65	76.667	Amphiprion_ocellaris
ENSCJAG00000017177	SRFBP1	89	76.667	ENSATEG00000007289	-	84	38.163	Anabas_testudineus
ENSCJAG00000017177	SRFBP1	99	44.749	ENSACAG00000003779	SRFBP1	100	44.444	Anolis_carolinensis
ENSCJAG00000017177	SRFBP1	100	92.774	ENSANAG00000022485	SRFBP1	100	92.774	Aotus_nancymaae
ENSCJAG00000017177	SRFBP1	99	35.211	ENSACLG00000013909	-	88	34.731	Astatotilapia_calliptera
ENSCJAG00000017177	SRFBP1	83	50.388	ENSAMXG00000040976	srfbp1	92	50.388	Astyanax_mexicanus
ENSCJAG00000017177	SRFBP1	100	74.825	ENSBTAG00000014320	SRFBP1	100	75.291	Bos_taurus
ENSCJAG00000017177	SRFBP1	100	77.209	ENSCAFG00000000512	SRFBP1	100	77.442	Canis_familiaris
ENSCJAG00000017177	SRFBP1	100	77.209	ENSCAFG00020009389	SRFBP1	100	77.442	Canis_lupus_dingo
ENSCJAG00000017177	SRFBP1	99	77.049	ENSTSYG00000008630	-	99	77.049	Carlito_syrichta
ENSCJAG00000017177	SRFBP1	99	58.838	ENSTSYG00000006869	-	99	58.838	Carlito_syrichta
ENSCJAG00000017177	SRFBP1	100	74.306	ENSCPOG00000004695	SRFBP1	100	74.074	Cavia_porcellus
ENSCJAG00000017177	SRFBP1	100	93.473	ENSCCAG00000032237	-	100	93.473	Cebus_capucinus
ENSCJAG00000017177	SRFBP1	100	90.909	ENSCATG00000040904	SRFBP1	100	90.909	Cercocebus_atys
ENSCJAG00000017177	SRFBP1	100	73.782	ENSCLAG00000003630	SRFBP1	100	73.782	Chinchilla_lanigera
ENSCJAG00000017177	SRFBP1	100	87.209	ENSCSAG00000014636	SRFBP1	100	88.605	Chlorocebus_sabaeus
ENSCJAG00000017177	SRFBP1	100	89.977	ENSCANG00000041298	SRFBP1	100	89.977	Colobus_angolensis_palliatus
ENSCJAG00000017177	SRFBP1	100	69.838	ENSCGRG00001000718	Srfbp1	98	69.838	Cricetulus_griseus_chok1gshd
ENSCJAG00000017177	SRFBP1	97	69.231	ENSCGRG00000010837	Srfbp1	100	69.231	Cricetulus_griseus_crigri
ENSCJAG00000017177	SRFBP1	99	39.953	ENSCSEG00000011789	-	79	62.602	Cynoglossus_semilaevis
ENSCJAG00000017177	SRFBP1	99	39.437	ENSCVAG00000013010	-	97	39.394	Cyprinodon_variegatus
ENSCJAG00000017177	SRFBP1	75	50.968	ENSDARG00000075323	srfbp1	74	50.968	Danio_rerio
ENSCJAG00000017177	SRFBP1	82	71.765	ENSDNOG00000017733	SRFBP1	100	71.765	Dasypus_novemcinctus
ENSCJAG00000017177	SRFBP1	82	63.717	ENSETEG00000012408	SRFBP1	100	63.824	Echinops_telfairi
ENSCJAG00000017177	SRFBP1	72	47.692	ENSEBUG00000007806	SRFBP1	58	47.692	Eptatretus_burgeri
ENSCJAG00000017177	SRFBP1	100	79.254	ENSEASG00005012421	SRFBP1	100	79.254	Equus_asinus_asinus
ENSCJAG00000017177	SRFBP1	100	79.487	ENSECAG00000015330	SRFBP1	100	78.788	Equus_caballus
ENSCJAG00000017177	SRFBP1	100	66.047	ENSEEUG00000011514	SRFBP1	100	66.047	Erinaceus_europaeus
ENSCJAG00000017177	SRFBP1	99	39.783	ENSELUG00000018381	-	97	39.565	Esox_lucius
ENSCJAG00000017177	SRFBP1	100	78.555	ENSFCAG00000035118	SRFBP1	100	78.788	Felis_catus
ENSCJAG00000017177	SRFBP1	97	42.958	ENSFALG00000007595	SRFBP1	100	42.202	Ficedula_albicollis
ENSCJAG00000017177	SRFBP1	100	71.363	ENSFDAG00000005102	SRFBP1	100	71.363	Fukomys_damarensis
ENSCJAG00000017177	SRFBP1	99	46.364	ENSGALG00000005316	SRFBP1	100	46.501	Gallus_gallus
ENSCJAG00000017177	SRFBP1	73	75.862	ENSGAFG00000018777	-	87	36.327	Gambusia_affinis
ENSCJAG00000017177	SRFBP1	99	39.863	ENSGACG00000009055	-	83	39.863	Gasterosteus_aculeatus
ENSCJAG00000017177	SRFBP1	97	46.853	ENSGAGG00000024915	SRFBP1	99	47.674	Gopherus_agassizii
ENSCJAG00000017177	SRFBP1	100	89.977	ENSGGOG00000007725	SRFBP1	100	89.977	Gorilla_gorilla
ENSCJAG00000017177	SRFBP1	73	57.857	ENSHCOG00000020644	-	84	36.381	Hippocampus_comes
ENSCJAG00000017177	SRFBP1	91	60.800	ENSIPUG00000014640	srfbp1	89	57.778	Ictalurus_punctatus
ENSCJAG00000017177	SRFBP1	100	75.581	ENSSTOG00000029184	SRFBP1	98	75.581	Ictidomys_tridecemlineatus
ENSCJAG00000017177	SRFBP1	97	62.740	ENSJJAG00000013229	Srfbp1	100	62.740	Jaculus_jaculus
ENSCJAG00000017177	SRFBP1	82	38.187	ENSLACG00000004456	SRFBP1	100	38.504	Latimeria_chalumnae
ENSCJAG00000017177	SRFBP1	99	41.704	ENSLOCG00000008772	SRFBP1	100	41.704	Lepisosteus_oculatus
ENSCJAG00000017177	SRFBP1	100	77.726	ENSLAFG00000015303	SRFBP1	98	77.726	Loxodonta_africana
ENSCJAG00000017177	SRFBP1	100	90.676	ENSMFAG00000031263	SRFBP1	100	90.676	Macaca_fascicularis
ENSCJAG00000017177	SRFBP1	100	90.676	ENSMMUG00000021009	SRFBP1	100	90.676	Macaca_mulatta
ENSCJAG00000017177	SRFBP1	100	90.676	ENSMNEG00000040870	SRFBP1	100	90.676	Macaca_nemestrina
ENSCJAG00000017177	SRFBP1	88	80.000	ENSMAMG00000004632	-	66	80.000	Mastacembelus_armatus
ENSCJAG00000017177	SRFBP1	81	39.295	ENSMZEG00005000432	-	66	38.606	Maylandia_zebra
ENSCJAG00000017177	SRFBP1	97	68.182	ENSMAUG00000009431	Srfbp1	95	68.182	Mesocricetus_auratus
ENSCJAG00000017177	SRFBP1	100	79.254	ENSMICG00000042923	SRFBP1	100	79.254	Microcebus_murinus
ENSCJAG00000017177	SRFBP1	99	67.991	ENSMOCG00000006206	Srfbp1	97	68.224	Microtus_ochrogaster
ENSCJAG00000017177	SRFBP1	66	40.559	ENSMMOG00000021202	-	97	37.554	Mola_mola
ENSCJAG00000017177	SRFBP1	100	59.310	ENSMODG00000013487	-	99	59.310	Monodelphis_domestica
ENSCJAG00000017177	SRFBP1	100	67.442	MGP_CAROLIEiJ_G0022271	Srfbp1	98	67.442	Mus_caroli
ENSCJAG00000017177	SRFBP1	100	66.051	ENSMUSG00000024528	Srfbp1	98	65.589	Mus_musculus
ENSCJAG00000017177	SRFBP1	100	66.744	MGP_PahariEiJ_G0019004	Srfbp1	98	66.744	Mus_pahari
ENSCJAG00000017177	SRFBP1	100	66.513	MGP_SPRETEiJ_G0023184	Srfbp1	98	66.513	Mus_spretus
ENSCJAG00000017177	SRFBP1	97	77.778	ENSMPUG00000013031	SRFBP1	100	77.778	Mustela_putorius_furo
ENSCJAG00000017177	SRFBP1	99	75.410	ENSMLUG00000009984	SRFBP1	100	75.878	Myotis_lucifugus
ENSCJAG00000017177	SRFBP1	100	68.605	ENSNGAG00000013229	Srfbp1	99	68.605	Nannospalax_galili
ENSCJAG00000017177	SRFBP1	99	39.821	ENSNBRG00000001146	-	99	39.773	Neolamprologus_brichardi
ENSCJAG00000017177	SRFBP1	100	89.744	ENSNLEG00000011949	SRFBP1	100	89.744	Nomascus_leucogenys
ENSCJAG00000017177	SRFBP1	69	77.273	ENSOPRG00000003881	-	100	58.242	Ochotona_princeps
ENSCJAG00000017177	SRFBP1	97	71.875	ENSODEG00000007258	SRFBP1	100	71.875	Octodon_degus
ENSCJAG00000017177	SRFBP1	90	49.077	ENSOANG00000010042	-	99	47.792	Ornithorhynchus_anatinus
ENSCJAG00000017177	SRFBP1	100	74.359	ENSOCUG00000009556	SRFBP1	100	72.494	Oryctolagus_cuniculus
ENSCJAG00000017177	SRFBP1	99	37.214	ENSORLG00000014234	-	88	37.214	Oryzias_latipes
ENSCJAG00000017177	SRFBP1	81	52.667	ENSORLG00020020129	-	88	35.294	Oryzias_latipes_hni
ENSCJAG00000017177	SRFBP1	99	37.844	ENSORLG00015000238	-	99	38.128	Oryzias_latipes_hsok
ENSCJAG00000017177	SRFBP1	99	73.068	ENSOGAG00000032423	SRFBP1	99	73.068	Otolemur_garnettii
ENSCJAG00000017177	SRFBP1	100	89.510	ENSPPAG00000035848	SRFBP1	100	89.510	Pan_paniscus
ENSCJAG00000017177	SRFBP1	100	79.254	ENSPPRG00000001695	SRFBP1	100	79.487	Panthera_pardus
ENSCJAG00000017177	SRFBP1	100	78.788	ENSPTIG00000012305	SRFBP1	100	79.021	Panthera_tigris_altaica
ENSCJAG00000017177	SRFBP1	100	89.744	ENSPTRG00000017172	SRFBP1	100	89.744	Pan_troglodytes
ENSCJAG00000017177	SRFBP1	100	88.811	ENSPANG00000003799	SRFBP1	100	89.977	Papio_anubis
ENSCJAG00000017177	SRFBP1	99	34.247	ENSPKIG00000024291	-	100	34.247	Paramormyrops_kingsleyae
ENSCJAG00000017177	SRFBP1	99	46.548	ENSPSIG00000010650	SRFBP1	99	46.548	Pelodiscus_sinensis
ENSCJAG00000017177	SRFBP1	99	38.940	ENSPMGG00000001675	-	99	39.318	Periophthalmus_magnuspinnatus
ENSCJAG00000017177	SRFBP1	100	60.000	ENSPCIG00000028532	SRFBP1	94	60.000	Phascolarctos_cinereus
ENSCJAG00000017177	SRFBP1	99	40.043	ENSPFOG00000005272	-	87	38.641	Poecilia_formosa
ENSCJAG00000017177	SRFBP1	72	75.000	ENSPLAG00000018282	-	87	36.706	Poecilia_latipinna
ENSCJAG00000017177	SRFBP1	72	75.000	ENSPMEG00000020184	-	88	36.310	Poecilia_mexicana
ENSCJAG00000017177	SRFBP1	98	38.991	ENSPREG00000017248	-	98	40.227	Poecilia_reticulata
ENSCJAG00000017177	SRFBP1	100	89.510	ENSPPYG00000015714	SRFBP1	100	89.510	Pongo_abelii
ENSCJAG00000017177	SRFBP1	100	79.254	ENSPCOG00000027331	SRFBP1	100	79.254	Propithecus_coquereli
ENSCJAG00000017177	SRFBP1	58	87.662	ENSPVAG00000017512	-	58	87.662	Pteropus_vampyrus
ENSCJAG00000017177	SRFBP1	73	76.667	ENSPNYG00000010355	-	99	40.045	Pundamilia_nyererei
ENSCJAG00000017177	SRFBP1	71	53.731	ENSPNAG00000029666	srfbp1	91	53.731	Pygocentrus_nattereri
ENSCJAG00000017177	SRFBP1	100	66.667	ENSRNOG00000014808	Srfbp1	98	66.667	Rattus_norvegicus
ENSCJAG00000017177	SRFBP1	97	86.124	ENSRBIG00000031064	SRFBP1	99	86.124	Rhinopithecus_bieti
ENSCJAG00000017177	SRFBP1	100	90.210	ENSRROG00000026932	SRFBP1	100	90.210	Rhinopithecus_roxellana
ENSCJAG00000017177	SRFBP1	100	93.240	ENSSBOG00000015464	-	99	93.240	Saimiri_boliviensis_boliviensis
ENSCJAG00000017177	SRFBP1	100	59.908	ENSSHAG00000016003	SRFBP1	99	60.138	Sarcophilus_harrisii
ENSCJAG00000017177	SRFBP1	99	38.703	ENSSFOG00015001274	srfbp1	99	38.912	Scleropages_formosus
ENSCJAG00000017177	SRFBP1	89	76.667	ENSSDUG00000001828	-	85	38.659	Seriola_dumerili
ENSCJAG00000017177	SRFBP1	100	72.622	ENSSARG00000010669	SRFBP1	100	74.478	Sorex_araneus
ENSCJAG00000017177	SRFBP1	97	45.727	ENSSPUG00000009204	SRFBP1	99	45.727	Sphenodon_punctatus
ENSCJAG00000017177	SRFBP1	73	76.667	ENSSPAG00000010728	-	67	76.667	Stegastes_partitus
ENSCJAG00000017177	SRFBP1	99	78.404	ENSSSCG00000022656	SRFBP1	99	78.638	Sus_scrofa
ENSCJAG00000017177	SRFBP1	81	83.636	ENSTTRG00000007726	SRFBP1	83	83.636	Tursiops_truncatus
ENSCJAG00000017177	SRFBP1	97	81.159	ENSUAMG00000016707	SRFBP1	100	81.401	Ursus_americanus
ENSCJAG00000017177	SRFBP1	97	76.739	ENSUMAG00000018340	SRFBP1	96	76.978	Ursus_maritimus
ENSCJAG00000017177	SRFBP1	100	77.622	ENSVPAG00000005714	SRFBP1	100	79.254	Vicugna_pacos
ENSCJAG00000017177	SRFBP1	100	77.209	ENSVVUG00000019178	SRFBP1	100	77.209	Vulpes_vulpes
ENSCJAG00000017177	SRFBP1	100	44.344	ENSXETG00000004681	srfbp1	99	44.344	Xenopus_tropicalis
ENSCJAG00000017177	SRFBP1	74	75.000	ENSXCOG00000003410	-	99	36.978	Xiphophorus_couchianus
ENSCJAG00000017177	SRFBP1	66	42.763	ENSXMAG00000026251	-	86	37.374	Xiphophorus_maculatus