EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000017351 (Gene tree)
Gene ID: -
Gene Symbol: RBFOX1
Alias: A2BP1|FOX-1|HRNBP1
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 2622920 bases
Position: chrNTIC01004446.1:544250-3167169
Accession: 18222
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000054547	Fox-1_C	PF12414.8	1.7e-42	1	1
ENSCJAP00000066684	Fox-1_C	PF12414.8	1.2e-40	1	1
ENSCJAP00000062680	Fox-1_C	PF12414.8	1.7e-40	1	1
ENSCJAP00000062085	Fox-1_C	PF12414.8	2.5e-40	1	1
ENSCJAP00000055247	Fox-1_C	PF12414.8	2.6e-40	1	1
ENSCJAP00000054313	Fox-1_C	PF12414.8	3.3e-40	1	1
ENSCJAP00000059603	Fox-1_C	PF12414.8	4.6e-40	1	1
ENSCJAP00000062223	Fox-1_C	PF12414.8	5.3e-23	1	1
ENSCJAP00000031960	Fox-1_C	PF12414.8	8.5e-19	1	1
ENSCJAP00000066684	RRM_1	PF00076.22	3.8e-18	1	1
ENSCJAP00000062223	RRM_1	PF00076.22	4.2e-18	1	1
ENSCJAP00000062680	RRM_1	PF00076.22	4.3e-18	1	1
ENSCJAP00000031960	RRM_1	PF00076.22	4.7e-18	1	1
ENSCJAP00000054547	RRM_1	PF00076.22	4.9e-18	1	1
ENSCJAP00000054313	RRM_1	PF00076.22	5.2e-18	1	1
ENSCJAP00000059603	RRM_1	PF00076.22	7e-18	1	1
ENSCJAP00000055247	RRM_1	PF00076.22	7.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000076466	RBFOX1-205	4463	-	ENSCJAP00000062680	418 (aa)	-	U3DYN4
ENSCJAT00000084209	RBFOX1-204	1143	-	ENSCJAP00000062085	380 (aa)	-	A0A2R8MM60
ENSCJAT00000033779	RBFOX1-208	1179	-	ENSCJAP00000031960	392 (aa)	-	F7HL41
ENSCJAT00000080456	RBFOX1-206	4460	-	ENSCJAP00000054547	417 (aa)	-	A0A2R8MU42
ENSCJAT00000083218	RBFOX1-201	1656	-	ENSCJAP00000059603	551 (aa)	-	A0A2R8PB00
ENSCJAT00000074442	RBFOX1-207	4382	-	ENSCJAP00000066684	391 (aa)	-	A0A2R8NEQ2
ENSCJAT00000071378	RBFOX1-202	1338	-	ENSCJAP00000054313	445 (aa)	-	A0A2R8M620
ENSCJAT00000074464	RBFOX1-209	1158	-	ENSCJAP00000062223	385 (aa)	-	A0A2R8N911
ENSCJAT00000071059	RBFOX1-203	1176	-	ENSCJAP00000055247	391 (aa)	-	A0A2R8P4R2

Gene Model

Click here to download ENSCJAG00000017351's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000017351's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000017351	RBFOX1	94	63.107	ENSCJAG00000019456	-	98	62.621
ENSCJAG00000017351	RBFOX1	94	63.054	ENSCJAG00000038886	-	95	62.745
ENSCJAG00000017351	RBFOX1	73	79.310	ENSCJAG00000009563	RBFOX3	100	65.470

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000017351	RBFOX1	100	99.488	ENSG00000078328	RBFOX1	100	99.488	Homo_sapiens
ENSCJAG00000017351	RBFOX1	97	78.788	ENSAPOG00000003197	rbfox1	98	80.105	Acanthochromis_polyacanthus
ENSCJAG00000017351	RBFOX1	63	96.327	ENSAMEG00000008605	RBFOX1	100	95.200	Ailuropoda_melanoleuca
ENSCJAG00000017351	RBFOX1	62	69.630	ENSACIG00000005478	rbfox1	68	69.630	Amphilophus_citrinellus
ENSCJAG00000017351	RBFOX1	67	78.571	ENSAOCG00000008283	rbfox1	96	78.214	Amphiprion_ocellaris
ENSCJAG00000017351	RBFOX1	94	75.623	ENSAPEG00000010636	rbfox1	100	75.623	Amphiprion_percula
ENSCJAG00000017351	RBFOX1	78	66.566	ENSATEG00000007513	rbfox1	97	76.056	Anabas_testudineus
ENSCJAG00000017351	RBFOX1	94	94.629	ENSAPLG00000013263	RBFOX1	98	94.629	Anas_platyrhynchos
ENSCJAG00000017351	RBFOX1	93	88.010	ENSACAG00000004013	RBFOX1	98	88.010	Anolis_carolinensis
ENSCJAG00000017351	RBFOX1	100	99.744	ENSANAG00000029527	RBFOX1	100	99.744	Aotus_nancymaae
ENSCJAG00000017351	RBFOX1	56	89.041	ENSAMXG00000002431	rbfox1	78	76.277	Astyanax_mexicanus
ENSCJAG00000017351	RBFOX1	93	98.462	ENSBTAG00000007210	RBFOX1	98	98.462	Bos_taurus
ENSCJAG00000017351	RBFOX1	100	98.325	ENSCAFG00000019082	RBFOX1	100	98.325	Canis_familiaris
ENSCJAG00000017351	RBFOX1	71	98.311	ENSCAFG00020024881	RBFOX1	83	98.311	Canis_lupus_dingo
ENSCJAG00000017351	RBFOX1	93	98.462	ENSCHIG00000023549	RBFOX1	98	98.462	Capra_hircus
ENSCJAG00000017351	RBFOX1	98	97.090	ENSTSYG00000005334	RBFOX1	100	99.133	Carlito_syrichta
ENSCJAG00000017351	RBFOX1	100	97.368	ENSCAPG00000017669	RBFOX1	100	98.196	Cavia_aperea
ENSCJAG00000017351	RBFOX1	100	97.368	ENSCPOG00000011314	RBFOX1	100	97.368	Cavia_porcellus
ENSCJAG00000017351	RBFOX1	100	99.522	ENSCCAG00000023031	RBFOX1	100	99.766	Cebus_capucinus
ENSCJAG00000017351	RBFOX1	100	99.488	ENSCATG00000033816	RBFOX1	100	99.488	Cercocebus_atys
ENSCJAG00000017351	RBFOX1	100	97.847	ENSCLAG00000012761	RBFOX1	100	97.847	Chinchilla_lanigera
ENSCJAG00000017351	RBFOX1	90	93.243	ENSCSAG00000008739	RBFOX1	98	98.378	Chlorocebus_sabaeus
ENSCJAG00000017351	RBFOX1	86	96.923	ENSCHOG00000012843	RBFOX1	80	96.923	Choloepus_hoffmanni
ENSCJAG00000017351	RBFOX1	93	94.845	ENSCPBG00000026626	RBFOX1	98	94.615	Chrysemys_picta_bellii
ENSCJAG00000017351	RBFOX1	100	99.488	ENSCANG00000033125	RBFOX1	100	99.488	Colobus_angolensis_palliatus
ENSCJAG00000017351	RBFOX1	100	97.129	ENSCGRG00001013729	Rbfox1	100	97.129	Cricetulus_griseus_chok1gshd
ENSCJAG00000017351	RBFOX1	100	97.129	ENSCGRG00000003272	Rbfox1	100	97.129	Cricetulus_griseus_crigri
ENSCJAG00000017351	RBFOX1	90	75.202	ENSCSEG00000008840	rbfox1	100	75.202	Cynoglossus_semilaevis
ENSCJAG00000017351	RBFOX1	93	86.264	ENSDARG00000014746	rbfox1	100	87.317	Danio_rerio
ENSCJAG00000017351	RBFOX1	96	96.020	ENSDNOG00000043612	RBFOX1	96	96.020	Dasypus_novemcinctus
ENSCJAG00000017351	RBFOX1	93	95.663	ENSDORG00000010024	Rbfox1	97	95.408	Dipodomys_ordii
ENSCJAG00000017351	RBFOX1	100	78.469	ENSETEG00000003771	RBFOX1	100	78.469	Echinops_telfairi
ENSCJAG00000017351	RBFOX1	97	98.765	ENSEASG00005011599	RBFOX1	98	99.231	Equus_asinus_asinus
ENSCJAG00000017351	RBFOX1	97	98.519	ENSECAG00000012667	RBFOX1	98	98.519	Equus_caballus
ENSCJAG00000017351	RBFOX1	80	74.419	ENSELUG00000013096	rbfox1	100	52.910	Esox_lucius
ENSCJAG00000017351	RBFOX1	100	98.721	ENSFCAG00000025322	RBFOX1	100	98.721	Felis_catus
ENSCJAG00000017351	RBFOX1	77	94.427	ENSFALG00000004027	RBFOX1	100	92.192	Ficedula_albicollis
ENSCJAG00000017351	RBFOX1	100	97.847	ENSFDAG00000007388	RBFOX1	100	97.847	Fukomys_damarensis
ENSCJAG00000017351	RBFOX1	100	93.301	ENSGALG00000034325	RBFOX1	100	93.301	Gallus_gallus
ENSCJAG00000017351	RBFOX1	100	93.350	ENSGAGG00000023681	RBFOX1	100	94.960	Gopherus_agassizii
ENSCJAG00000017351	RBFOX1	100	99.488	ENSGGOG00000016871	-	100	99.488	Gorilla_gorilla
ENSCJAG00000017351	RBFOX1	100	97.608	ENSHGLG00000016944	RBFOX1	100	97.608	Heterocephalus_glaber_female
ENSCJAG00000017351	RBFOX1	100	97.608	ENSHGLG00100003272	RBFOX1	100	97.608	Heterocephalus_glaber_male
ENSCJAG00000017351	RBFOX1	80	77.570	ENSHCOG00000016419	rbfox1	91	77.570	Hippocampus_comes
ENSCJAG00000017351	RBFOX1	99	79.896	ENSIPUG00000015215	rbfox1	100	88.319	Ictalurus_punctatus
ENSCJAG00000017351	RBFOX1	100	96.890	ENSSTOG00000000322	RBFOX1	100	96.890	Ictidomys_tridecemlineatus
ENSCJAG00000017351	RBFOX1	100	94.498	ENSJJAG00000002575	Rbfox1	100	94.498	Jaculus_jaculus
ENSCJAG00000017351	RBFOX1	98	75.907	ENSLBEG00000014659	rbfox1	99	75.907	Labrus_bergylta
ENSCJAG00000017351	RBFOX1	94	86.548	ENSLOCG00000006675	rbfox1	99	86.548	Lepisosteus_oculatus
ENSCJAG00000017351	RBFOX1	74	99.351	ENSLAFG00000011480	RBFOX1	100	99.351	Loxodonta_africana
ENSCJAG00000017351	RBFOX1	100	99.233	ENSMFAG00000036447	RBFOX1	100	99.233	Macaca_fascicularis
ENSCJAG00000017351	RBFOX1	100	99.233	ENSMMUG00000003458	RBFOX1	100	99.233	Macaca_mulatta
ENSCJAG00000017351	RBFOX1	100	99.233	ENSMNEG00000032034	RBFOX1	100	99.233	Macaca_nemestrina
ENSCJAG00000017351	RBFOX1	100	99.488	ENSMLEG00000015382	RBFOX1	100	99.550	Mandrillus_leucophaeus
ENSCJAG00000017351	RBFOX1	90	79.235	ENSMAMG00000003142	rbfox1	100	79.781	Mastacembelus_armatus
ENSCJAG00000017351	RBFOX1	72	88.809	ENSMGAG00000008606	RBFOX1	96	87.857	Meleagris_gallopavo
ENSCJAG00000017351	RBFOX1	98	58.158	ENSMAUG00000020570	Rbfox1	99	57.632	Mesocricetus_auratus
ENSCJAG00000017351	RBFOX1	100	98.977	ENSMICG00000034286	RBFOX1	100	98.977	Microcebus_murinus
ENSCJAG00000017351	RBFOX1	100	97.129	ENSMOCG00000020932	Rbfox1	100	97.656	Microtus_ochrogaster
ENSCJAG00000017351	RBFOX1	83	76.087	ENSMMOG00000009716	rbfox1	86	77.955	Mola_mola
ENSCJAG00000017351	RBFOX1	86	91.808	ENSMODG00000005826	RBFOX1	100	97.175	Monodelphis_domestica
ENSCJAG00000017351	RBFOX1	100	75.303	ENSMALG00000003337	rbfox1	98	79.787	Monopterus_albus
ENSCJAG00000017351	RBFOX1	100	97.368	MGP_CAROLIEiJ_G0020427	Rbfox1	100	97.368	Mus_caroli
ENSCJAG00000017351	RBFOX1	100	97.129	ENSMUSG00000008658	Rbfox1	100	99.248	Mus_musculus
ENSCJAG00000017351	RBFOX1	100	97.368	MGP_PahariEiJ_G0016135	Rbfox1	100	97.368	Mus_pahari
ENSCJAG00000017351	RBFOX1	100	96.890	MGP_SPRETEiJ_G0021321	Rbfox1	100	96.890	Mus_spretus
ENSCJAG00000017351	RBFOX1	86	96.657	ENSMPUG00000014822	RBFOX1	93	98.093	Mustela_putorius_furo
ENSCJAG00000017351	RBFOX1	74	99.674	ENSMLUG00000015896	RBFOX1	100	99.674	Myotis_lucifugus
ENSCJAG00000017351	RBFOX1	100	97.608	ENSNGAG00000023276	Rbfox1	100	98.196	Nannospalax_galili
ENSCJAG00000017351	RBFOX1	96	61.631	ENSNBRG00000011084	rbfox1	98	61.631	Neolamprologus_brichardi
ENSCJAG00000017351	RBFOX1	100	98.804	ENSNLEG00000010017	-	100	98.804	Nomascus_leucogenys
ENSCJAG00000017351	RBFOX1	88	95.102	ENSMEUG00000012525	RBFOX1	100	80.144	Notamacropus_eugenii
ENSCJAG00000017351	RBFOX1	88	96.327	ENSOPRG00000006199	-	100	79.904	Ochotona_princeps
ENSCJAG00000017351	RBFOX1	100	97.129	ENSODEG00000013166	RBFOX1	100	97.129	Octodon_degus
ENSCJAG00000017351	RBFOX1	89	90.710	ENSOANG00000002379	RBFOX1	98	95.135	Ornithorhynchus_anatinus
ENSCJAG00000017351	RBFOX1	56	96.330	ENSOCUG00000001205	-	100	94.222	Oryctolagus_cuniculus
ENSCJAG00000017351	RBFOX1	94	98.462	ENSOGAG00000025535	RBFOX1	98	98.462	Otolemur_garnettii
ENSCJAG00000017351	RBFOX1	59	92.641	ENSOARG00000005135	RBFOX1	99	92.641	Ovis_aries
ENSCJAG00000017351	RBFOX1	100	99.488	ENSPPAG00000036238	-	100	99.488	Pan_paniscus
ENSCJAG00000017351	RBFOX1	100	98.721	ENSPPRG00000006546	RBFOX1	100	98.721	Panthera_pardus
ENSCJAG00000017351	RBFOX1	96	86.957	ENSPTIG00000021154	RBFOX1	99	86.118	Panthera_tigris_altaica
ENSCJAG00000017351	RBFOX1	100	99.488	ENSPTRG00000007744	RBFOX1	100	99.488	Pan_troglodytes
ENSCJAG00000017351	RBFOX1	100	99.488	ENSPANG00000026500	RBFOX1	100	99.488	Papio_anubis
ENSCJAG00000017351	RBFOX1	68	92.424	ENSPKIG00000019353	rbfox1	86	91.698	Paramormyrops_kingsleyae
ENSCJAG00000017351	RBFOX1	93	86.066	ENSPKIG00000009667	-	95	87.427	Paramormyrops_kingsleyae
ENSCJAG00000017351	RBFOX1	93	94.859	ENSPSIG00000006523	RBFOX1	97	94.859	Pelodiscus_sinensis
ENSCJAG00000017351	RBFOX1	100	97.368	ENSPEMG00000017607	Rbfox1	100	97.368	Peromyscus_maniculatus_bairdii
ENSCJAG00000017351	RBFOX1	71	94.014	ENSPCIG00000026887	RBFOX1	100	94.014	Phascolarctos_cinereus
ENSCJAG00000017351	RBFOX1	86	97.772	ENSPPYG00000007079	-	93	98.910	Pongo_abelii
ENSCJAG00000017351	RBFOX1	90	89.153	ENSPCAG00000002630	RBFOX1	100	89.153	Procavia_capensis
ENSCJAG00000017351	RBFOX1	100	98.977	ENSPCOG00000025687	RBFOX1	100	98.977	Propithecus_coquereli
ENSCJAG00000017351	RBFOX1	100	94.019	ENSPVAG00000013467	RBFOX1	100	94.019	Pteropus_vampyrus
ENSCJAG00000017351	RBFOX1	90	85.445	ENSPNAG00000023109	rbfox1	100	85.445	Pygocentrus_nattereri
ENSCJAG00000017351	RBFOX1	100	96.643	ENSRNOG00000002827	Rbfox1	100	96.643	Rattus_norvegicus
ENSCJAG00000017351	RBFOX1	93	99.517	ENSRBIG00000044478	RBFOX1	100	99.517	Rhinopithecus_bieti
ENSCJAG00000017351	RBFOX1	100	99.488	ENSRROG00000044411	RBFOX1	100	99.488	Rhinopithecus_roxellana
ENSCJAG00000017351	RBFOX1	100	99.488	ENSSBOG00000033726	RBFOX1	100	99.488	Saimiri_boliviensis_boliviensis
ENSCJAG00000017351	RBFOX1	94	92.821	ENSSHAG00000009257	RBFOX1	98	92.821	Sarcophilus_harrisii
ENSCJAG00000017351	RBFOX1	87	73.775	ENSSFOG00015009955	-	87	73.775	Scleropages_formosus
ENSCJAG00000017351	RBFOX1	97	73.698	ENSSFOG00015023675	rbfox1	97	87.778	Scleropages_formosus
ENSCJAG00000017351	RBFOX1	97	78.987	ENSSMAG00000015505	rbfox1	96	78.734	Scophthalmus_maximus
ENSCJAG00000017351	RBFOX1	96	78.226	ENSSDUG00000016413	rbfox1	99	80.055	Seriola_dumerili
ENSCJAG00000017351	RBFOX1	83	76.780	ENSSLDG00000009353	rbfox1	93	77.474	Seriola_lalandi_dorsalis
ENSCJAG00000017351	RBFOX1	80	89.809	ENSSPUG00000009732	RBFOX1	87	89.809	Sphenodon_punctatus
ENSCJAG00000017351	RBFOX1	96	78.628	ENSSPAG00000009723	rbfox1	100	79.737	Stegastes_partitus
ENSCJAG00000017351	RBFOX1	97	98.025	ENSSSCG00000007917	RBFOX1	100	98.870	Sus_scrofa
ENSCJAG00000017351	RBFOX1	93	94.859	ENSTGUG00000004562	RBFOX1	100	94.859	Taeniopygia_guttata
ENSCJAG00000017351	RBFOX1	93	79.474	ENSTRUG00000020940	rbfox1	99	79.474	Takifugu_rubripes
ENSCJAG00000017351	RBFOX1	63	88.462	ENSTNIG00000002567	rbfox1	100	62.500	Tetraodon_nigroviridis
ENSCJAG00000017351	RBFOX1	81	89.655	ENSTBEG00000009169	-	81	89.655	Tupaia_belangeri
ENSCJAG00000017351	RBFOX1	100	98.086	ENSTTRG00000005700	RBFOX1	100	98.086	Tursiops_truncatus
ENSCJAG00000017351	RBFOX1	98	96.042	ENSUAMG00000024633	RBFOX1	99	96.042	Ursus_americanus
ENSCJAG00000017351	RBFOX1	98	86.807	ENSUMAG00000003579	RBFOX1	99	87.071	Ursus_maritimus
ENSCJAG00000017351	RBFOX1	81	99.351	ENSVPAG00000001284	RBFOX1	81	99.351	Vicugna_pacos
ENSCJAG00000017351	RBFOX1	94	98.210	ENSVVUG00000017311	RBFOX1	98	97.838	Vulpes_vulpes