EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000017382 (Gene tree)
Gene ID: 100403398
Gene Symbol: MRPS18A
Alias: FLJ10548|MRPS18-3
Full Name: mitochondrial ribosomal protein S18A
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 19692 bases
Position: chrNTIC01022223.1:123009402-123029093
Accession: 100403398
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000054268	Ribosomal_S18	PF01084.20	5.5e-16	1	1
ENSCJAP00000032026	Ribosomal_S18	PF01084.20	8.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000033851	MRPS18A-202	384	-	ENSCJAP00000032026	127 (aa)	XP_008992749	F7D3N2
ENSCJAT00000085824	MRPS18A-201	923	-	ENSCJAP00000054268	196 (aa)	XP_002746638	U3CCR0

Gene Model

Click here to download ENSCJAG00000017382's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000017382's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000017382	MRPS18A	100	92.857	ENSG00000096080	MRPS18A	100	92.857	Homo_sapiens
ENSCJAG00000017382	MRPS18A	99	81.746	ENSAMEG00000012117	MRPS18A	100	80.612	Ailuropoda_melanoleuca
ENSCJAG00000017382	MRPS18A	87	64.368	ENSACIG00000017782	mrps18a	83	64.368	Amphilophus_citrinellus
ENSCJAG00000017382	MRPS18A	75	68.421	ENSAOCG00000005723	mrps18a	55	68.421	Amphiprion_ocellaris
ENSCJAG00000017382	MRPS18A	84	64.458	ENSAPEG00000006971	mrps18a	79	64.458	Amphiprion_percula
ENSCJAG00000017382	MRPS18A	100	57.692	ENSATEG00000003132	mrps18a	100	57.692	Anabas_testudineus
ENSCJAG00000017382	MRPS18A	81	70.440	ENSAPLG00000016280	MRPS18A	100	70.440	Anas_platyrhynchos
ENSCJAG00000017382	MRPS18A	99	65.079	ENSACAG00000000642	MRPS18A	100	62.755	Anolis_carolinensis
ENSCJAG00000017382	MRPS18A	100	97.449	ENSANAG00000030889	MRPS18A	100	97.449	Aotus_nancymaae
ENSCJAG00000017382	MRPS18A	95	54.255	ENSACLG00000008170	mrps18a	99	54.255	Astatotilapia_calliptera
ENSCJAG00000017382	MRPS18A	58	64.348	ENSAMXG00000036055	-	85	64.348	Astyanax_mexicanus
ENSCJAG00000017382	MRPS18A	99	54.348	ENSAMXG00000036348	mrps18a	100	51.905	Astyanax_mexicanus
ENSCJAG00000017382	MRPS18A	99	84.127	ENSBTAG00000025571	MRPS18A	100	80.102	Bos_taurus
ENSCJAG00000017382	MRPS18A	72	33.696	WBGene00022583	mrps-18A	50	33.333	Caenorhabditis_elegans
ENSCJAG00000017382	MRPS18A	100	80.315	ENSCAFG00000001928	MRPS18A	100	79.082	Canis_familiaris
ENSCJAG00000017382	MRPS18A	99	80.159	ENSCAFG00020012064	MRPS18A	83	78.571	Canis_lupus_dingo
ENSCJAG00000017382	MRPS18A	99	80.952	ENSCHIG00000013039	MRPS18A	100	78.061	Capra_hircus
ENSCJAG00000017382	MRPS18A	100	87.402	ENSTSYG00000001390	MRPS18A	100	87.402	Carlito_syrichta
ENSCJAG00000017382	MRPS18A	80	82.051	ENSCAPG00000016029	MRPS18A	96	82.051	Cavia_aperea
ENSCJAG00000017382	MRPS18A	100	81.122	ENSCPOG00000022949	MRPS18A	100	81.122	Cavia_porcellus
ENSCJAG00000017382	MRPS18A	100	95.918	ENSCCAG00000021108	MRPS18A	100	95.918	Cebus_capucinus
ENSCJAG00000017382	MRPS18A	100	91.327	ENSCATG00000012963	MRPS18A	100	91.327	Cercocebus_atys
ENSCJAG00000017382	MRPS18A	100	79.592	ENSCLAG00000012929	MRPS18A	100	79.592	Chinchilla_lanigera
ENSCJAG00000017382	MRPS18A	100	91.837	ENSCSAG00000012127	MRPS18A	100	91.837	Chlorocebus_sabaeus
ENSCJAG00000017382	MRPS18A	99	65.079	ENSCPBG00000025243	MRPS18A	100	62.755	Chrysemys_picta_bellii
ENSCJAG00000017382	MRPS18A	82	34.756	ENSCING00000024771	-	82	34.756	Ciona_intestinalis
ENSCJAG00000017382	MRPS18A	81	37.037	ENSCSAVG00000009539	-	88	36.250	Ciona_savignyi
ENSCJAG00000017382	MRPS18A	100	92.347	ENSCANG00000039873	MRPS18A	100	92.347	Colobus_angolensis_palliatus
ENSCJAG00000017382	MRPS18A	87	86.364	ENSCGRG00001017882	Mrps18a	97	79.444	Cricetulus_griseus_chok1gshd
ENSCJAG00000017382	MRPS18A	92	63.889	ENSCGRG00000000079	Mrps18a	100	58.389	Cricetulus_griseus_crigri
ENSCJAG00000017382	MRPS18A	99	56.250	ENSCSEG00000019650	mrps18a	99	55.502	Cynoglossus_semilaevis
ENSCJAG00000017382	MRPS18A	100	58.571	ENSCVAG00000006511	mrps18a	100	58.571	Cyprinodon_variegatus
ENSCJAG00000017382	MRPS18A	85	64.286	ENSDARG00000024465	mrps18a	90	59.162	Danio_rerio
ENSCJAG00000017382	MRPS18A	99	83.333	ENSDNOG00000035755	MRPS18A	99	80.102	Dasypus_novemcinctus
ENSCJAG00000017382	MRPS18A	99	85.714	ENSDORG00000014583	Mrps18a	100	83.673	Dipodomys_ordii
ENSCJAG00000017382	MRPS18A	74	38.542	FBgn0051450	mRpS18A	65	39.806	Drosophila_melanogaster
ENSCJAG00000017382	MRPS18A	61	91.026	ENSETEG00000014171	MRPS18A	100	69.730	Echinops_telfairi
ENSCJAG00000017382	MRPS18A	99	80.159	ENSEASG00005003485	MRPS18A	64	80.114	Equus_asinus_asinus
ENSCJAG00000017382	MRPS18A	99	79.365	ENSECAG00000004870	MRPS18A	64	78.409	Equus_caballus
ENSCJAG00000017382	MRPS18A	84	63.636	ENSELUG00000005253	mrps18a	78	63.636	Esox_lucius
ENSCJAG00000017382	MRPS18A	100	81.102	ENSFCAG00000036031	MRPS18A	100	81.102	Felis_catus
ENSCJAG00000017382	MRPS18A	100	62.755	ENSFALG00000011356	MRPS18A	100	62.755	Ficedula_albicollis
ENSCJAG00000017382	MRPS18A	99	80.159	ENSFDAG00000012875	MRPS18A	97	72.680	Fukomys_damarensis
ENSCJAG00000017382	MRPS18A	82	67.081	ENSFHEG00000009014	mrps18a	77	67.081	Fundulus_heteroclitus
ENSCJAG00000017382	MRPS18A	100	53.500	ENSGMOG00000012493	mrps18a	97	54.000	Gadus_morhua
ENSCJAG00000017382	MRPS18A	92	67.769	ENSGALG00000010296	MRPS18A	97	70.423	Gallus_gallus
ENSCJAG00000017382	MRPS18A	97	59.314	ENSGAFG00000005211	mrps18a	98	59.314	Gambusia_affinis
ENSCJAG00000017382	MRPS18A	81	63.522	ENSGACG00000013370	mrps18a	77	64.151	Gasterosteus_aculeatus
ENSCJAG00000017382	MRPS18A	76	68.919	ENSGAGG00000017954	MRPS18A	100	58.673	Gopherus_agassizii
ENSCJAG00000017382	MRPS18A	100	92.347	ENSGGOG00000006303	-	100	92.347	Gorilla_gorilla
ENSCJAG00000017382	MRPS18A	84	64.242	ENSHBUG00000014682	mrps18a	79	64.242	Haplochromis_burtoni
ENSCJAG00000017382	MRPS18A	99	80.159	ENSHGLG00000014356	MRPS18A	100	78.061	Heterocephalus_glaber_female
ENSCJAG00000017382	MRPS18A	99	80.159	ENSHGLG00100010988	MRPS18A	100	78.061	Heterocephalus_glaber_male
ENSCJAG00000017382	MRPS18A	84	65.854	ENSHCOG00000000856	mrps18a	79	65.854	Hippocampus_comes
ENSCJAG00000017382	MRPS18A	95	60.638	ENSIPUG00000017406	mrps18a	90	61.170	Ictalurus_punctatus
ENSCJAG00000017382	MRPS18A	99	83.333	ENSSTOG00000004490	MRPS18A	100	78.641	Ictidomys_tridecemlineatus
ENSCJAG00000017382	MRPS18A	99	86.508	ENSJJAG00000006567	Mrps18a	100	83.673	Jaculus_jaculus
ENSCJAG00000017382	MRPS18A	85	64.881	ENSKMAG00000014910	mrps18a	80	64.881	Kryptolebias_marmoratus
ENSCJAG00000017382	MRPS18A	100	56.190	ENSLBEG00000003391	mrps18a	100	56.190	Labrus_bergylta
ENSCJAG00000017382	MRPS18A	87	48.538	ENSLACG00000022160	mrps18a	79	48.538	Latimeria_chalumnae
ENSCJAG00000017382	MRPS18A	98	63.200	ENSLOCG00000016008	mrps18a	93	61.735	Lepisosteus_oculatus
ENSCJAG00000017382	MRPS18A	100	77.665	ENSLAFG00000001168	MRPS18A	100	77.665	Loxodonta_africana
ENSCJAG00000017382	MRPS18A	100	91.837	ENSMFAG00000038311	MRPS18A	100	91.837	Macaca_fascicularis
ENSCJAG00000017382	MRPS18A	100	91.837	ENSMMUG00000014749	MRPS18A	100	91.837	Macaca_mulatta
ENSCJAG00000017382	MRPS18A	100	91.327	ENSMNEG00000044642	MRPS18A	100	91.327	Macaca_nemestrina
ENSCJAG00000017382	MRPS18A	81	94.304	ENSMLEG00000041828	MRPS18A	100	94.304	Mandrillus_leucophaeus
ENSCJAG00000017382	MRPS18A	84	66.867	ENSMAMG00000015478	mrps18a	79	66.867	Mastacembelus_armatus
ENSCJAG00000017382	MRPS18A	95	54.255	ENSMZEG00005014925	mrps18a	99	54.255	Maylandia_zebra
ENSCJAG00000017382	MRPS18A	97	65.789	ENSMGAG00000010915	MRPS18A	97	65.789	Meleagris_gallopavo
ENSCJAG00000017382	MRPS18A	100	85.039	ENSMICG00000005062	MRPS18A	100	85.039	Microcebus_murinus
ENSCJAG00000017382	MRPS18A	96	76.190	ENSMOCG00000015168	-	100	76.190	Microtus_ochrogaster
ENSCJAG00000017382	MRPS18A	100	80.102	ENSMOCG00000021207	-	100	80.102	Microtus_ochrogaster
ENSCJAG00000017382	MRPS18A	94	56.303	ENSMMOG00000015315	mrps18a	81	56.303	Mola_mola
ENSCJAG00000017382	MRPS18A	80	66.879	ENSMMOG00000015248	mrps18a	76	66.879	Mola_mola
ENSCJAG00000017382	MRPS18A	100	77.953	ENSMODG00000018952	MRPS18A	100	64.435	Monodelphis_domestica
ENSCJAG00000017382	MRPS18A	100	58.571	ENSMALG00000017044	mrps18a	91	58.571	Monopterus_albus
ENSCJAG00000017382	MRPS18A	100	80.102	MGP_CAROLIEiJ_G0021656	Mrps18a	100	80.102	Mus_caroli
ENSCJAG00000017382	MRPS18A	100	79.592	ENSMUSG00000023967	Mrps18a	100	79.592	Mus_musculus
ENSCJAG00000017382	MRPS18A	100	80.102	MGP_PahariEiJ_G0020648	Mrps18a	100	80.102	Mus_pahari
ENSCJAG00000017382	MRPS18A	100	79.592	MGP_SPRETEiJ_G0022568	Mrps18a	100	79.592	Mus_spretus
ENSCJAG00000017382	MRPS18A	99	82.540	ENSMPUG00000012868	MRPS18A	83	80.612	Mustela_putorius_furo
ENSCJAG00000017382	MRPS18A	99	84.921	ENSMLUG00000017755	MRPS18A	100	82.143	Myotis_lucifugus
ENSCJAG00000017382	MRPS18A	100	80.612	ENSNGAG00000020052	Mrps18a	100	80.612	Nannospalax_galili
ENSCJAG00000017382	MRPS18A	84	64.242	ENSNBRG00000021152	mrps18a	79	64.242	Neolamprologus_brichardi
ENSCJAG00000017382	MRPS18A	100	93.367	ENSNLEG00000003865	MRPS18A	100	93.367	Nomascus_leucogenys
ENSCJAG00000017382	MRPS18A	100	79.528	ENSMEUG00000013986	MRPS18A	100	61.446	Notamacropus_eugenii
ENSCJAG00000017382	MRPS18A	99	84.127	ENSOPRG00000007680	MRPS18A	100	60.311	Ochotona_princeps
ENSCJAG00000017382	MRPS18A	99	79.365	ENSODEG00000015388	MRPS18A	100	77.551	Octodon_degus
ENSCJAG00000017382	MRPS18A	84	64.242	ENSONIG00000000609	mrps18a	79	64.242	Oreochromis_niloticus
ENSCJAG00000017382	MRPS18A	81	80.503	ENSOANG00000001955	MRPS18A	100	80.503	Ornithorhynchus_anatinus
ENSCJAG00000017382	MRPS18A	99	89.683	ENSOCUG00000005544	MRPS18A	100	86.224	Oryctolagus_cuniculus
ENSCJAG00000017382	MRPS18A	84	63.253	ENSORLG00000023864	mrps18a	80	63.253	Oryzias_latipes
ENSCJAG00000017382	MRPS18A	84	63.855	ENSORLG00020002882	mrps18a	80	63.855	Oryzias_latipes_hni
ENSCJAG00000017382	MRPS18A	84	62.651	ENSORLG00015022065	mrps18a	80	62.651	Oryzias_latipes_hsok
ENSCJAG00000017382	MRPS18A	84	65.663	ENSOMEG00000018124	mrps18a	79	65.663	Oryzias_melastigma
ENSCJAG00000017382	MRPS18A	99	83.333	ENSOGAG00000026551	MRPS18A	100	82.143	Otolemur_garnettii
ENSCJAG00000017382	MRPS18A	99	80.952	ENSOARG00000008279	MRPS18A	100	78.061	Ovis_aries
ENSCJAG00000017382	MRPS18A	100	93.367	ENSPPAG00000036291	MRPS18A	100	93.367	Pan_paniscus
ENSCJAG00000017382	MRPS18A	100	81.102	ENSPPRG00000006429	MRPS18A	100	81.102	Panthera_pardus
ENSCJAG00000017382	MRPS18A	100	81.102	ENSPTIG00000001653	MRPS18A	100	81.102	Panthera_tigris_altaica
ENSCJAG00000017382	MRPS18A	100	93.367	ENSPTRG00000018209	MRPS18A	100	93.367	Pan_troglodytes
ENSCJAG00000017382	MRPS18A	100	91.837	ENSPANG00000006967	MRPS18A	100	91.837	Papio_anubis
ENSCJAG00000017382	MRPS18A	84	67.879	ENSPKIG00000012807	mrps18a	71	67.879	Paramormyrops_kingsleyae
ENSCJAG00000017382	MRPS18A	78	69.892	ENSPSIG00000013672	MRPS18A	85	63.190	Pelodiscus_sinensis
ENSCJAG00000017382	MRPS18A	65	68.702	ENSPMGG00000000493	mrps18a	77	65.789	Periophthalmus_magnuspinnatus
ENSCJAG00000017382	MRPS18A	99	83.333	ENSPEMG00000000405	Mrps18a	100	81.633	Peromyscus_maniculatus_bairdii
ENSCJAG00000017382	MRPS18A	91	59.551	ENSPMAG00000007012	mrps18a	93	59.551	Petromyzon_marinus
ENSCJAG00000017382	MRPS18A	99	78.571	ENSPCIG00000024858	MRPS18A	100	77.551	Phascolarctos_cinereus
ENSCJAG00000017382	MRPS18A	81	66.250	ENSPFOG00000009046	mrps18a	100	66.250	Poecilia_formosa
ENSCJAG00000017382	MRPS18A	100	57.416	ENSPLAG00000011106	mrps18a	100	57.416	Poecilia_latipinna
ENSCJAG00000017382	MRPS18A	100	57.416	ENSPMEG00000000736	mrps18a	100	57.416	Poecilia_mexicana
ENSCJAG00000017382	MRPS18A	84	66.867	ENSPREG00000012172	mrps18a	89	62.275	Poecilia_reticulata
ENSCJAG00000017382	MRPS18A	100	91.837	ENSPPYG00000017282	MRPS18A	100	91.837	Pongo_abelii
ENSCJAG00000017382	MRPS18A	69	90.909	ENSPCAG00000004192	MRPS18A	99	65.534	Procavia_capensis
ENSCJAG00000017382	MRPS18A	100	85.039	ENSPCOG00000014911	MRPS18A	100	85.039	Propithecus_coquereli
ENSCJAG00000017382	MRPS18A	98	83.200	ENSPVAG00000002758	MRPS18A	100	51.311	Pteropus_vampyrus
ENSCJAG00000017382	MRPS18A	84	64.242	ENSPNYG00000014753	mrps18a	79	64.242	Pundamilia_nyererei
ENSCJAG00000017382	MRPS18A	87	60.694	ENSPNAG00000023462	mrps18a	82	60.694	Pygocentrus_nattereri
ENSCJAG00000017382	MRPS18A	100	79.592	ENSRNOG00000019511	Mrps18a	100	79.592	Rattus_norvegicus
ENSCJAG00000017382	MRPS18A	100	92.347	ENSRBIG00000028789	MRPS18A	100	92.347	Rhinopithecus_bieti
ENSCJAG00000017382	MRPS18A	100	91.837	ENSRROG00000042368	-	100	91.837	Rhinopithecus_roxellana
ENSCJAG00000017382	MRPS18A	100	92.913	ENSSBOG00000019943	MRPS18A	100	92.913	Saimiri_boliviensis_boliviensis
ENSCJAG00000017382	MRPS18A	100	77.551	ENSSHAG00000015048	-	100	77.551	Sarcophilus_harrisii
ENSCJAG00000017382	MRPS18A	95	61.290	ENSSFOG00015005628	mrps18a	90	61.290	Scleropages_formosus
ENSCJAG00000017382	MRPS18A	92	62.842	ENSSMAG00000009353	mrps18a	89	62.842	Scophthalmus_maximus
ENSCJAG00000017382	MRPS18A	71	69.504	ENSSDUG00000011655	mrps18a	96	58.730	Seriola_dumerili
ENSCJAG00000017382	MRPS18A	95	57.447	ENSSLDG00000025435	mrps18a	95	57.447	Seriola_lalandi_dorsalis
ENSCJAG00000017382	MRPS18A	100	67.005	ENSSPUG00000011517	MRPS18A	100	67.005	Sphenodon_punctatus
ENSCJAG00000017382	MRPS18A	100	61.307	ENSSPAG00000000034	mrps18a	94	61.307	Stegastes_partitus
ENSCJAG00000017382	MRPS18A	99	81.746	ENSSSCG00000001692	MRPS18A	100	80.102	Sus_scrofa
ENSCJAG00000017382	MRPS18A	76	68.919	ENSTGUG00000008142	MRPS18A	100	68.919	Taeniopygia_guttata
ENSCJAG00000017382	MRPS18A	87	65.698	ENSTRUG00000025134	mrps18a	82	65.698	Takifugu_rubripes
ENSCJAG00000017382	MRPS18A	97	58.500	ENSTNIG00000016302	mrps18a	96	58.500	Tetraodon_nigroviridis
ENSCJAG00000017382	MRPS18A	99	75.397	ENSTBEG00000004094	MRPS18A	100	54.826	Tupaia_belangeri
ENSCJAG00000017382	MRPS18A	100	69.048	ENSTTRG00000006354	MRPS18A	100	44.610	Tursiops_truncatus
ENSCJAG00000017382	MRPS18A	99	82.540	ENSUAMG00000013758	MRPS18A	100	80.612	Ursus_americanus
ENSCJAG00000017382	MRPS18A	99	81.746	ENSUMAG00000005910	MRPS18A	100	80.102	Ursus_maritimus
ENSCJAG00000017382	MRPS18A	77	63.158	ENSVVUG00000022444	-	75	63.158	Vulpes_vulpes
ENSCJAG00000017382	MRPS18A	99	79.365	ENSVVUG00000029092	-	100	77.551	Vulpes_vulpes
ENSCJAG00000017382	MRPS18A	97	60.163	ENSXETG00000003270	mrps18a	94	63.758	Xenopus_tropicalis
ENSCJAG00000017382	MRPS18A	78	64.052	ENSXCOG00000007223	mrps18a	81	64.706	Xiphophorus_couchianus
ENSCJAG00000017382	MRPS18A	100	56.938	ENSXMAG00000004867	mrps18a	100	57.416	Xiphophorus_maculatus