EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000017681 (Gene tree)
Gene ID: 100393915
Gene Symbol: EDC3
Alias: FLJ21128|LSM16|YJDC|YJEFN2|hYjeF_N2-15q23
Full Name: enhancer of mRNA decapping 3
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 41421 bases
Position: chrNTIC01038834.1:130640791-130682211
Accession: 100393915
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000032609	FDF	PF09532.10	7.9e-19	1	1
ENSCJAP00000032609	LSM14	PF12701.7	9.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000034464	EDC3-201	1527	-	ENSCJAP00000032609	508 (aa)	XP_009003497	F7ERK1

Gene Model

Click here to download ENSCJAG00000017681's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000017681's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000017681	EDC3	100	98.622	ENSG00000179151	EDC3	100	100.000	Homo_sapiens
ENSCJAG00000017681	EDC3	100	56.117	ENSAPOG00000008655	EDC3	100	56.117	Acanthochromis_polyacanthus
ENSCJAG00000017681	EDC3	100	70.000	ENSAPOG00000010791	edc3	100	70.000	Acanthochromis_polyacanthus
ENSCJAG00000017681	EDC3	100	96.654	ENSAMEG00000008963	EDC3	100	96.654	Ailuropoda_melanoleuca
ENSCJAG00000017681	EDC3	99	60.117	ENSACIG00000005330	EDC3	99	60.117	Amphilophus_citrinellus
ENSCJAG00000017681	EDC3	100	68.762	ENSACIG00000017751	edc3	100	68.762	Amphilophus_citrinellus
ENSCJAG00000017681	EDC3	100	70.000	ENSAOCG00000005431	edc3	100	70.000	Amphiprion_ocellaris
ENSCJAG00000017681	EDC3	100	58.221	ENSAOCG00000009103	-	100	58.333	Amphiprion_ocellaris
ENSCJAG00000017681	EDC3	100	58.333	ENSAPEG00000007841	EDC3	100	58.333	Amphiprion_percula
ENSCJAG00000017681	EDC3	100	70.000	ENSAPEG00000000968	edc3	100	70.000	Amphiprion_percula
ENSCJAG00000017681	EDC3	100	69.941	ENSATEG00000015505	edc3	100	70.138	Anabas_testudineus
ENSCJAG00000017681	EDC3	100	58.700	ENSATEG00000004205	-	100	58.700	Anabas_testudineus
ENSCJAG00000017681	EDC3	90	87.253	ENSAPLG00000008957	EDC3	100	87.253	Anas_platyrhynchos
ENSCJAG00000017681	EDC3	78	87.657	ENSACAG00000000460	-	100	87.657	Anolis_carolinensis
ENSCJAG00000017681	EDC3	100	99.213	ENSANAG00000024078	EDC3	100	99.213	Aotus_nancymaae
ENSCJAG00000017681	EDC3	100	67.976	ENSACLG00000007232	edc3	100	67.976	Astatotilapia_calliptera
ENSCJAG00000017681	EDC3	99	58.869	ENSACLG00000018776	-	99	58.869	Astatotilapia_calliptera
ENSCJAG00000017681	EDC3	100	70.428	ENSAMXG00000001589	edc3	100	70.600	Astyanax_mexicanus
ENSCJAG00000017681	EDC3	100	97.244	ENSBTAG00000007308	EDC3	100	97.244	Bos_taurus
ENSCJAG00000017681	EDC3	100	96.850	ENSCAFG00000017935	EDC3	100	96.850	Canis_familiaris
ENSCJAG00000017681	EDC3	100	96.850	ENSCAFG00020003909	EDC3	100	96.850	Canis_lupus_dingo
ENSCJAG00000017681	EDC3	100	97.047	ENSCHIG00000023658	EDC3	100	97.047	Capra_hircus
ENSCJAG00000017681	EDC3	100	97.441	ENSTSYG00000004822	EDC3	100	97.441	Carlito_syrichta
ENSCJAG00000017681	EDC3	100	95.669	ENSCPOG00000015595	EDC3	100	95.669	Cavia_porcellus
ENSCJAG00000017681	EDC3	100	99.606	ENSCCAG00000021663	EDC3	100	99.606	Cebus_capucinus
ENSCJAG00000017681	EDC3	100	98.819	ENSCATG00000037511	EDC3	100	98.819	Cercocebus_atys
ENSCJAG00000017681	EDC3	100	95.472	ENSCLAG00000005700	EDC3	100	95.472	Chinchilla_lanigera
ENSCJAG00000017681	EDC3	100	98.819	ENSCSAG00000014239	EDC3	100	98.819	Chlorocebus_sabaeus
ENSCJAG00000017681	EDC3	100	89.173	ENSCPBG00000024239	EDC3	100	89.173	Chrysemys_picta_bellii
ENSCJAG00000017681	EDC3	100	38.462	ENSCING00000022142	-	99	38.462	Ciona_intestinalis
ENSCJAG00000017681	EDC3	100	98.819	ENSCANG00000028699	EDC3	100	98.819	Colobus_angolensis_palliatus
ENSCJAG00000017681	EDC3	100	96.850	ENSCGRG00001013874	Edc3	100	96.850	Cricetulus_griseus_chok1gshd
ENSCJAG00000017681	EDC3	100	96.850	ENSCGRG00000011885	Edc3	100	96.850	Cricetulus_griseus_crigri
ENSCJAG00000017681	EDC3	99	69.685	ENSCSEG00000012996	edc3	99	69.685	Cynoglossus_semilaevis
ENSCJAG00000017681	EDC3	100	68.566	ENSCVAG00000008023	edc3	100	68.566	Cyprinodon_variegatus
ENSCJAG00000017681	EDC3	99	68.431	ENSDARG00000051931	edc3	99	68.811	Danio_rerio
ENSCJAG00000017681	EDC3	100	85.271	ENSDNOG00000030661	EDC3	100	85.271	Dasypus_novemcinctus
ENSCJAG00000017681	EDC3	64	98.148	ENSETEG00000002398	-	64	98.148	Echinops_telfairi
ENSCJAG00000017681	EDC3	100	98.031	ENSEASG00005005071	EDC3	100	98.031	Equus_asinus_asinus
ENSCJAG00000017681	EDC3	100	98.031	ENSECAG00000017994	EDC3	100	98.031	Equus_caballus
ENSCJAG00000017681	EDC3	100	62.427	ENSELUG00000007607	EDC3	100	62.427	Esox_lucius
ENSCJAG00000017681	EDC3	100	66.082	ENSELUG00000005794	edc3	100	66.082	Esox_lucius
ENSCJAG00000017681	EDC3	100	96.457	ENSFCAG00000002014	EDC3	100	96.457	Felis_catus
ENSCJAG00000017681	EDC3	98	84.770	ENSFALG00000004543	EDC3	96	84.770	Ficedula_albicollis
ENSCJAG00000017681	EDC3	100	95.472	ENSFDAG00000012582	EDC3	100	95.472	Fukomys_damarensis
ENSCJAG00000017681	EDC3	100	69.804	ENSFHEG00000009375	edc3	100	69.804	Fundulus_heteroclitus
ENSCJAG00000017681	EDC3	100	68.750	ENSGMOG00000002715	edc3	100	68.750	Gadus_morhua
ENSCJAG00000017681	EDC3	100	88.780	ENSGALG00000040181	EDC3	100	88.780	Gallus_gallus
ENSCJAG00000017681	EDC3	100	68.173	ENSGAFG00000014433	edc3	100	68.235	Gambusia_affinis
ENSCJAG00000017681	EDC3	99	55.470	ENSGACG00000014671	EDC3	99	56.311	Gasterosteus_aculeatus
ENSCJAG00000017681	EDC3	100	68.762	ENSGACG00000009783	edc3	100	68.762	Gasterosteus_aculeatus
ENSCJAG00000017681	EDC3	100	88.780	ENSGAGG00000023477	EDC3	100	88.780	Gopherus_agassizii
ENSCJAG00000017681	EDC3	100	98.819	ENSGGOG00000003552	EDC3	100	98.819	Gorilla_gorilla
ENSCJAG00000017681	EDC3	100	67.976	ENSHBUG00000003635	edc3	100	67.976	Haplochromis_burtoni
ENSCJAG00000017681	EDC3	99	58.869	ENSHBUG00000020817	EDC3	99	58.869	Haplochromis_burtoni
ENSCJAG00000017681	EDC3	100	67.773	ENSHCOG00000016834	edc3	100	67.906	Hippocampus_comes
ENSCJAG00000017681	EDC3	99	70.059	ENSIPUG00000005695	edc3	100	70.059	Ictalurus_punctatus
ENSCJAG00000017681	EDC3	100	98.031	ENSSTOG00000013936	EDC3	100	98.031	Ictidomys_tridecemlineatus
ENSCJAG00000017681	EDC3	100	95.866	ENSJJAG00000008074	Edc3	100	95.866	Jaculus_jaculus
ENSCJAG00000017681	EDC3	100	69.155	ENSKMAG00000001243	edc3	100	69.155	Kryptolebias_marmoratus
ENSCJAG00000017681	EDC3	100	55.709	ENSKMAG00000001987	EDC3	100	55.709	Kryptolebias_marmoratus
ENSCJAG00000017681	EDC3	100	69.608	ENSLBEG00000013435	edc3	99	69.608	Labrus_bergylta
ENSCJAG00000017681	EDC3	100	58.527	ENSLBEG00000017984	EDC3	100	58.527	Labrus_bergylta
ENSCJAG00000017681	EDC3	100	77.864	ENSLACG00000014149	EDC3	100	77.864	Latimeria_chalumnae
ENSCJAG00000017681	EDC3	99	67.446	ENSLOCG00000014625	edc3	99	67.446	Lepisosteus_oculatus
ENSCJAG00000017681	EDC3	100	95.866	ENSLAFG00000002992	EDC3	100	95.866	Loxodonta_africana
ENSCJAG00000017681	EDC3	100	98.425	ENSMFAG00000043074	EDC3	100	98.425	Macaca_fascicularis
ENSCJAG00000017681	EDC3	100	98.425	ENSMMUG00000011071	EDC3	100	98.425	Macaca_mulatta
ENSCJAG00000017681	EDC3	100	98.425	ENSMNEG00000035316	EDC3	100	98.425	Macaca_nemestrina
ENSCJAG00000017681	EDC3	100	98.819	ENSMLEG00000030372	EDC3	100	98.819	Mandrillus_leucophaeus
ENSCJAG00000017681	EDC3	99	56.836	ENSMAMG00000005423	-	99	56.836	Mastacembelus_armatus
ENSCJAG00000017681	EDC3	100	70.138	ENSMAMG00000000505	edc3	100	70.138	Mastacembelus_armatus
ENSCJAG00000017681	EDC3	100	67.976	ENSMZEG00005004892	edc3	100	67.976	Maylandia_zebra
ENSCJAG00000017681	EDC3	99	59.180	ENSMZEG00005005654	EDC3	99	59.180	Maylandia_zebra
ENSCJAG00000017681	EDC3	100	87.795	ENSMGAG00000002617	EDC3	100	87.795	Meleagris_gallopavo
ENSCJAG00000017681	EDC3	100	97.441	ENSMICG00000043190	EDC3	100	97.441	Microcebus_murinus
ENSCJAG00000017681	EDC3	100	96.850	ENSMOCG00000016205	Edc3	100	96.850	Microtus_ochrogaster
ENSCJAG00000017681	EDC3	99	69.155	ENSMMOG00000012278	edc3	99	69.155	Mola_mola
ENSCJAG00000017681	EDC3	100	92.913	ENSMODG00000009442	EDC3	100	92.913	Monodelphis_domestica
ENSCJAG00000017681	EDC3	100	69.941	ENSMALG00000008658	edc3	100	69.941	Monopterus_albus
ENSCJAG00000017681	EDC3	100	96.260	MGP_CAROLIEiJ_G0032280	Edc3	100	98.462	Mus_caroli
ENSCJAG00000017681	EDC3	100	95.866	ENSMUSG00000038957	Edc3	100	98.462	Mus_musculus
ENSCJAG00000017681	EDC3	100	96.457	MGP_PahariEiJ_G0015146	Edc3	100	98.462	Mus_pahari
ENSCJAG00000017681	EDC3	100	95.669	MGP_SPRETEiJ_G0033420	Edc3	100	98.462	Mus_spretus
ENSCJAG00000017681	EDC3	100	96.260	ENSMPUG00000017293	EDC3	100	96.260	Mustela_putorius_furo
ENSCJAG00000017681	EDC3	100	97.647	ENSMLUG00000016382	EDC3	100	97.647	Myotis_lucifugus
ENSCJAG00000017681	EDC3	100	96.260	ENSNGAG00000010923	Edc3	100	96.260	Nannospalax_galili
ENSCJAG00000017681	EDC3	100	68.369	ENSNBRG00000002434	edc3	100	68.369	Neolamprologus_brichardi
ENSCJAG00000017681	EDC3	99	59.180	ENSNBRG00000007881	EDC3	99	59.180	Neolamprologus_brichardi
ENSCJAG00000017681	EDC3	100	89.173	ENSNLEG00000014577	EDC3	100	89.173	Nomascus_leucogenys
ENSCJAG00000017681	EDC3	100	91.929	ENSMEUG00000009077	EDC3	100	91.929	Notamacropus_eugenii
ENSCJAG00000017681	EDC3	79	96.296	ENSOPRG00000009540	-	79	96.296	Ochotona_princeps
ENSCJAG00000017681	EDC3	100	68.173	ENSONIG00000008434	edc3	100	68.173	Oreochromis_niloticus
ENSCJAG00000017681	EDC3	99	60.234	ENSONIG00000002932	-	99	60.234	Oreochromis_niloticus
ENSCJAG00000017681	EDC3	78	92.191	ENSOCUG00000017740	EDC3	86	92.191	Oryctolagus_cuniculus
ENSCJAG00000017681	EDC3	100	67.976	ENSORLG00000004883	edc3	100	67.976	Oryzias_latipes
ENSCJAG00000017681	EDC3	100	56.809	ENSORLG00000014399	-	98	56.809	Oryzias_latipes
ENSCJAG00000017681	EDC3	100	67.780	ENSORLG00020012262	edc3	100	67.780	Oryzias_latipes_hni
ENSCJAG00000017681	EDC3	100	56.809	ENSORLG00020019446	-	100	56.809	Oryzias_latipes_hni
ENSCJAG00000017681	EDC3	100	67.578	ENSORLG00015005634	edc3	100	67.578	Oryzias_latipes_hsok
ENSCJAG00000017681	EDC3	100	56.226	ENSORLG00015017635	-	96	56.226	Oryzias_latipes_hsok
ENSCJAG00000017681	EDC3	100	57.031	ENSOMEG00000017354	EDC3	100	57.031	Oryzias_melastigma
ENSCJAG00000017681	EDC3	100	69.020	ENSOMEG00000014026	edc3	100	69.020	Oryzias_melastigma
ENSCJAG00000017681	EDC3	100	97.835	ENSOGAG00000014441	EDC3	100	97.835	Otolemur_garnettii
ENSCJAG00000017681	EDC3	100	96.660	ENSOARG00000003476	EDC3	100	96.660	Ovis_aries
ENSCJAG00000017681	EDC3	100	98.819	ENSPPAG00000040143	EDC3	100	98.819	Pan_paniscus
ENSCJAG00000017681	EDC3	100	96.850	ENSPPRG00000006257	EDC3	100	96.850	Panthera_pardus
ENSCJAG00000017681	EDC3	100	96.850	ENSPTIG00000017424	EDC3	100	96.850	Panthera_tigris_altaica
ENSCJAG00000017681	EDC3	100	98.819	ENSPTRG00000007279	EDC3	100	98.819	Pan_troglodytes
ENSCJAG00000017681	EDC3	100	98.819	ENSPANG00000015997	EDC3	100	98.819	Papio_anubis
ENSCJAG00000017681	EDC3	100	68.555	ENSPKIG00000004416	edc3	100	69.531	Paramormyrops_kingsleyae
ENSCJAG00000017681	EDC3	100	66.211	ENSPKIG00000019810	EDC3	100	66.211	Paramormyrops_kingsleyae
ENSCJAG00000017681	EDC3	100	83.465	ENSPSIG00000008474	EDC3	100	83.465	Pelodiscus_sinensis
ENSCJAG00000017681	EDC3	100	67.123	ENSPMGG00000007223	edc3	100	67.123	Periophthalmus_magnuspinnatus
ENSCJAG00000017681	EDC3	100	96.457	ENSPEMG00000015260	Edc3	100	96.457	Peromyscus_maniculatus_bairdii
ENSCJAG00000017681	EDC3	100	90.551	ENSPCIG00000006276	EDC3	70	90.730	Phascolarctos_cinereus
ENSCJAG00000017681	EDC3	100	69.066	ENSPFOG00000012204	edc3	100	69.066	Poecilia_formosa
ENSCJAG00000017681	EDC3	100	69.066	ENSPLAG00000014420	edc3	100	69.066	Poecilia_latipinna
ENSCJAG00000017681	EDC3	100	69.066	ENSPMEG00000023289	edc3	100	69.066	Poecilia_mexicana
ENSCJAG00000017681	EDC3	100	69.352	ENSPREG00000016022	edc3	100	69.352	Poecilia_reticulata
ENSCJAG00000017681	EDC3	100	97.638	ENSPPYG00000006642	EDC3	100	97.638	Pongo_abelii
ENSCJAG00000017681	EDC3	88	100.000	ENSPCAG00000002802	EDC3	88	100.000	Procavia_capensis
ENSCJAG00000017681	EDC3	100	97.638	ENSPCOG00000013364	EDC3	100	97.638	Propithecus_coquereli
ENSCJAG00000017681	EDC3	100	96.654	ENSPVAG00000014733	EDC3	100	96.654	Pteropus_vampyrus
ENSCJAG00000017681	EDC3	99	58.869	ENSPNYG00000009669	EDC3	99	58.869	Pundamilia_nyererei
ENSCJAG00000017681	EDC3	100	67.976	ENSPNYG00000021797	edc3	100	67.976	Pundamilia_nyererei
ENSCJAG00000017681	EDC3	100	70.039	ENSPNAG00000019657	edc3	100	70.039	Pygocentrus_nattereri
ENSCJAG00000017681	EDC3	99	96.436	ENSRNOG00000019579	Edc3	99	96.436	Rattus_norvegicus
ENSCJAG00000017681	EDC3	100	98.425	ENSRBIG00000019488	EDC3	100	98.425	Rhinopithecus_bieti
ENSCJAG00000017681	EDC3	100	98.425	ENSRROG00000034959	EDC3	100	98.425	Rhinopithecus_roxellana
ENSCJAG00000017681	EDC3	100	99.409	ENSSBOG00000004896	EDC3	100	99.409	Saimiri_boliviensis_boliviensis
ENSCJAG00000017681	EDC3	96	91.820	ENSSHAG00000015075	EDC3	95	91.820	Sarcophilus_harrisii
ENSCJAG00000017681	EDC3	100	63.529	ENSSFOG00015002439	edc3	100	65.370	Scleropages_formosus
ENSCJAG00000017681	EDC3	100	69.942	ENSSFOG00015016939	edc3	100	70.623	Scleropages_formosus
ENSCJAG00000017681	EDC3	99	56.923	ENSSMAG00000010176	-	99	56.923	Scophthalmus_maximus
ENSCJAG00000017681	EDC3	100	69.020	ENSSMAG00000010695	edc3	100	69.548	Scophthalmus_maximus
ENSCJAG00000017681	EDC3	100	60.000	ENSSDUG00000007671	EDC3	100	60.000	Seriola_dumerili
ENSCJAG00000017681	EDC3	100	69.412	ENSSDUG00000021844	edc3	100	69.412	Seriola_dumerili
ENSCJAG00000017681	EDC3	100	69.412	ENSSLDG00000022046	edc3	100	69.412	Seriola_lalandi_dorsalis
ENSCJAG00000017681	EDC3	81	96.371	ENSSARG00000003907	EDC3	80	96.371	Sorex_araneus
ENSCJAG00000017681	EDC3	100	88.583	ENSSPUG00000008232	EDC3	100	88.583	Sphenodon_punctatus
ENSCJAG00000017681	EDC3	100	69.804	ENSSPAG00000010009	edc3	100	70.334	Stegastes_partitus
ENSCJAG00000017681	EDC3	100	57.977	ENSSPAG00000020327	EDC3	100	57.977	Stegastes_partitus
ENSCJAG00000017681	EDC3	100	97.835	ENSSSCG00000001903	EDC3	100	97.835	Sus_scrofa
ENSCJAG00000017681	EDC3	100	88.386	ENSTGUG00000004007	EDC3	100	88.386	Taeniopygia_guttata
ENSCJAG00000017681	EDC3	100	70.334	ENSTRUG00000017078	edc3	100	70.334	Takifugu_rubripes
ENSCJAG00000017681	EDC3	100	68.750	ENSTNIG00000016047	edc3	100	68.750	Tetraodon_nigroviridis
ENSCJAG00000017681	EDC3	100	97.244	ENSTTRG00000007990	EDC3	100	97.244	Tursiops_truncatus
ENSCJAG00000017681	EDC3	100	96.654	ENSUAMG00000026710	-	100	96.654	Ursus_americanus
ENSCJAG00000017681	EDC3	100	96.654	ENSUMAG00000005006	EDC3	96	96.654	Ursus_maritimus
ENSCJAG00000017681	EDC3	79	87.037	ENSVPAG00000003499	-	79	87.037	Vicugna_pacos
ENSCJAG00000017681	EDC3	100	97.047	ENSVVUG00000018601	EDC3	100	97.047	Vulpes_vulpes
ENSCJAG00000017681	EDC3	68	82.471	ENSXETG00000010622	edc3	99	83.621	Xenopus_tropicalis
ENSCJAG00000017681	EDC3	100	69.155	ENSXMAG00000007377	edc3	100	69.155	Xiphophorus_maculatus