EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000018069 (Gene tree)
Gene ID: 100395136
Gene Symbol: CPSF2
Alias: CPSF100|KIAA1367
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 33271 bases
Position: chrNTIC01038834.1:11997536-12030806
Accession: 100395136
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000033454	Beta-Casp	PF10996.8	1.3e-20	1	1
ENSCJAP00000033454	Lactamase_B	PF00753.27	2.2e-06	1	1
ENSCJAP00000033454	RMMBL	PF07521.12	1.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000035345	CPSF2-201	2387	-	ENSCJAP00000033454	782 (aa)	XP_002754257	F6R015
ENSCJAT00000072264	CPSF2-202	189	-	ENSCJAP00000057878	62 (aa)	-	A0A2R8MDF7

Gene Model

Click here to download ENSCJAG00000018069's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000018069's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000018069	CPSF2	100	99.744	ENSG00000165934	CPSF2	100	100.000	Homo_sapiens
ENSCJAG00000018069	CPSF2	100	86.058	ENSAPOG00000001242	cpsf2	100	86.058	Acanthochromis_polyacanthus
ENSCJAG00000018069	CPSF2	100	86.456	ENSACIG00000009331	cpsf2	100	86.456	Amphilophus_citrinellus
ENSCJAG00000018069	CPSF2	100	86.185	ENSAOCG00000014095	cpsf2	100	86.185	Amphiprion_ocellaris
ENSCJAG00000018069	CPSF2	100	86.185	ENSAPEG00000009158	cpsf2	100	86.185	Amphiprion_percula
ENSCJAG00000018069	CPSF2	96	86.316	ENSATEG00000017644	cpsf2	100	84.474	Anabas_testudineus
ENSCJAG00000018069	CPSF2	100	96.051	ENSAPLG00000006330	CPSF2	100	96.051	Anas_platyrhynchos
ENSCJAG00000018069	CPSF2	100	95.147	ENSACAG00000009245	CPSF2	100	95.147	Anolis_carolinensis
ENSCJAG00000018069	CPSF2	100	100.000	ENSANAG00000022915	CPSF2	100	100.000	Aotus_nancymaae
ENSCJAG00000018069	CPSF2	100	85.769	ENSAMXG00000018696	cpsf2	100	85.769	Astyanax_mexicanus
ENSCJAG00000018069	CPSF2	100	99.616	ENSBTAG00000010227	CPSF2	100	99.616	Bos_taurus
ENSCJAG00000018069	CPSF2	100	41.569	WBGene00017313	cpsf-2	100	41.032	Caenorhabditis_elegans
ENSCJAG00000018069	CPSF2	100	99.616	ENSCAFG00000010909	CPSF2	100	99.616	Canis_familiaris
ENSCJAG00000018069	CPSF2	100	99.616	ENSCAFG00020020670	CPSF2	100	99.616	Canis_lupus_dingo
ENSCJAG00000018069	CPSF2	100	99.616	ENSCHIG00000023848	CPSF2	100	99.616	Capra_hircus
ENSCJAG00000018069	CPSF2	100	98.849	ENSTSYG00000009036	CPSF2	100	98.849	Carlito_syrichta
ENSCJAG00000018069	CPSF2	100	99.744	ENSCPOG00000010899	CPSF2	100	99.744	Cavia_porcellus
ENSCJAG00000018069	CPSF2	100	100.000	ENSCCAG00000028088	CPSF2	100	100.000	Cebus_capucinus
ENSCJAG00000018069	CPSF2	100	99.872	ENSCATG00000030132	CPSF2	100	99.872	Cercocebus_atys
ENSCJAG00000018069	CPSF2	100	99.616	ENSCLAG00000012404	CPSF2	100	99.616	Chinchilla_lanigera
ENSCJAG00000018069	CPSF2	100	99.872	ENSCSAG00000011300	CPSF2	100	99.872	Chlorocebus_sabaeus
ENSCJAG00000018069	CPSF2	100	92.583	ENSCHOG00000012904	CPSF2	100	92.583	Choloepus_hoffmanni
ENSCJAG00000018069	CPSF2	100	96.296	ENSCPBG00000008766	CPSF2	97	96.296	Chrysemys_picta_bellii
ENSCJAG00000018069	CPSF2	100	54.795	ENSCING00000007881	-	100	54.421	Ciona_intestinalis
ENSCJAG00000018069	CPSF2	94	99.863	ENSCANG00000041651	CPSF2	100	99.863	Colobus_angolensis_palliatus
ENSCJAG00000018069	CPSF2	100	98.465	ENSCGRG00001006901	Cpsf2	100	98.465	Cricetulus_griseus_chok1gshd
ENSCJAG00000018069	CPSF2	100	98.465	ENSCGRG00000012416	Cpsf2	100	98.465	Cricetulus_griseus_crigri
ENSCJAG00000018069	CPSF2	100	83.904	ENSCSEG00000004116	cpsf2	100	83.904	Cynoglossus_semilaevis
ENSCJAG00000018069	CPSF2	100	85.425	ENSCVAG00000000095	cpsf2	100	85.551	Cyprinodon_variegatus
ENSCJAG00000018069	CPSF2	100	85.696	ENSDARG00000028971	cpsf2	100	85.696	Danio_rerio
ENSCJAG00000018069	CPSF2	100	99.488	ENSDNOG00000042757	CPSF2	100	99.488	Dasypus_novemcinctus
ENSCJAG00000018069	CPSF2	100	99.361	ENSDORG00000013709	Cpsf2	100	99.361	Dipodomys_ordii
ENSCJAG00000018069	CPSF2	100	54.047	FBgn0027873	Cpsf100	100	53.933	Drosophila_melanogaster
ENSCJAG00000018069	CPSF2	100	90.294	ENSETEG00000012123	CPSF2	100	90.294	Echinops_telfairi
ENSCJAG00000018069	CPSF2	52	76.471	ENSEBUG00000012098	cpsf2	93	76.471	Eptatretus_burgeri
ENSCJAG00000018069	CPSF2	91	97.611	ENSEASG00005021193	CPSF2	100	97.611	Equus_asinus_asinus
ENSCJAG00000018069	CPSF2	100	99.488	ENSECAG00000023935	CPSF2	100	99.488	Equus_caballus
ENSCJAG00000018069	CPSF2	100	84.065	ENSELUG00000008442	cpsf2	100	84.065	Esox_lucius
ENSCJAG00000018069	CPSF2	100	99.488	ENSFCAG00000007886	CPSF2	100	99.488	Felis_catus
ENSCJAG00000018069	CPSF2	100	96.296	ENSFALG00000002412	CPSF2	100	96.296	Ficedula_albicollis
ENSCJAG00000018069	CPSF2	100	99.616	ENSFDAG00000006327	CPSF2	100	99.616	Fukomys_damarensis
ENSCJAG00000018069	CPSF2	96	84.706	ENSFHEG00000015465	cpsf2	98	84.967	Fundulus_heteroclitus
ENSCJAG00000018069	CPSF2	100	83.586	ENSGMOG00000008761	cpsf2	100	83.586	Gadus_morhua
ENSCJAG00000018069	CPSF2	100	95.530	ENSGALG00000010783	CPSF2	100	96.041	Gallus_gallus
ENSCJAG00000018069	CPSF2	100	85.678	ENSGAFG00000001407	cpsf2	100	85.678	Gambusia_affinis
ENSCJAG00000018069	CPSF2	100	84.664	ENSGACG00000008418	cpsf2	100	84.664	Gasterosteus_aculeatus
ENSCJAG00000018069	CPSF2	100	96.424	ENSGAGG00000008287	CPSF2	100	96.424	Gopherus_agassizii
ENSCJAG00000018069	CPSF2	100	99.744	ENSGGOG00000011799	CPSF2	100	99.744	Gorilla_gorilla
ENSCJAG00000018069	CPSF2	100	85.298	ENSHBUG00000023466	cpsf2	100	85.298	Haplochromis_burtoni
ENSCJAG00000018069	CPSF2	100	99.488	ENSHGLG00000018311	CPSF2	100	99.488	Heterocephalus_glaber_female
ENSCJAG00000018069	CPSF2	100	99.488	ENSHGLG00100016460	CPSF2	100	99.488	Heterocephalus_glaber_male
ENSCJAG00000018069	CPSF2	100	84.791	ENSHCOG00000019527	cpsf2	98	84.791	Hippocampus_comes
ENSCJAG00000018069	CPSF2	100	85.769	ENSIPUG00000020857	cpsf2	100	85.769	Ictalurus_punctatus
ENSCJAG00000018069	CPSF2	100	99.872	ENSSTOG00000009528	CPSF2	100	99.872	Ictidomys_tridecemlineatus
ENSCJAG00000018069	CPSF2	100	99.233	ENSJJAG00000017925	Cpsf2	100	99.233	Jaculus_jaculus
ENSCJAG00000018069	CPSF2	100	84.918	ENSKMAG00000019429	cpsf2	100	84.918	Kryptolebias_marmoratus
ENSCJAG00000018069	CPSF2	95	84.225	ENSLBEG00000011585	cpsf2	100	84.492	Labrus_bergylta
ENSCJAG00000018069	CPSF2	100	89.655	ENSLACG00000019024	CPSF2	100	89.911	Latimeria_chalumnae
ENSCJAG00000018069	CPSF2	100	87.833	ENSLOCG00000014102	cpsf2	100	87.833	Lepisosteus_oculatus
ENSCJAG00000018069	CPSF2	100	99.235	ENSLAFG00000004891	CPSF2	100	99.235	Loxodonta_africana
ENSCJAG00000018069	CPSF2	100	99.872	ENSMFAG00000041212	CPSF2	100	99.872	Macaca_fascicularis
ENSCJAG00000018069	CPSF2	100	99.872	ENSMMUG00000000699	CPSF2	100	99.872	Macaca_mulatta
ENSCJAG00000018069	CPSF2	100	99.872	ENSMNEG00000031584	CPSF2	100	99.872	Macaca_nemestrina
ENSCJAG00000018069	CPSF2	100	99.872	ENSMLEG00000029394	CPSF2	100	99.872	Mandrillus_leucophaeus
ENSCJAG00000018069	CPSF2	100	85.932	ENSMAMG00000004235	cpsf2	100	85.932	Mastacembelus_armatus
ENSCJAG00000018069	CPSF2	100	85.425	ENSMZEG00005001769	cpsf2	100	85.425	Maylandia_zebra
ENSCJAG00000018069	CPSF2	100	95.536	ENSMGAG00000013122	CPSF2	100	96.046	Meleagris_gallopavo
ENSCJAG00000018069	CPSF2	100	98.465	ENSMAUG00000015160	Cpsf2	100	98.465	Mesocricetus_auratus
ENSCJAG00000018069	CPSF2	100	99.744	ENSMICG00000016441	CPSF2	100	99.744	Microcebus_murinus
ENSCJAG00000018069	CPSF2	100	98.465	ENSMOCG00000015372	Cpsf2	100	98.465	Microtus_ochrogaster
ENSCJAG00000018069	CPSF2	100	81.242	ENSMMOG00000015590	cpsf2	100	81.242	Mola_mola
ENSCJAG00000018069	CPSF2	100	99.105	ENSMODG00000002042	CPSF2	100	99.105	Monodelphis_domestica
ENSCJAG00000018069	CPSF2	100	82.890	ENSMALG00000022275	cpsf2	100	82.890	Monopterus_albus
ENSCJAG00000018069	CPSF2	100	97.954	ENSMUSG00000041781	Cpsf2	100	97.954	Mus_musculus
ENSCJAG00000018069	CPSF2	100	98.210	MGP_PahariEiJ_G0029791	Cpsf2	100	98.210	Mus_pahari
ENSCJAG00000018069	CPSF2	100	97.954	MGP_SPRETEiJ_G0018877	Cpsf2	100	97.954	Mus_spretus
ENSCJAG00000018069	CPSF2	100	99.616	ENSMPUG00000007617	CPSF2	98	99.616	Mustela_putorius_furo
ENSCJAG00000018069	CPSF2	100	98.849	ENSMLUG00000005570	CPSF2	100	98.849	Myotis_lucifugus
ENSCJAG00000018069	CPSF2	100	98.977	ENSNGAG00000020312	Cpsf2	100	98.977	Nannospalax_galili
ENSCJAG00000018069	CPSF2	100	85.805	ENSNBRG00000022402	cpsf2	100	85.805	Neolamprologus_brichardi
ENSCJAG00000018069	CPSF2	100	98.849	ENSNLEG00000017132	CPSF2	100	98.849	Nomascus_leucogenys
ENSCJAG00000018069	CPSF2	91	99.676	ENSMEUG00000008138	CPSF2	91	99.676	Notamacropus_eugenii
ENSCJAG00000018069	CPSF2	94	91.667	ENSOPRG00000008484	-	100	91.667	Ochotona_princeps
ENSCJAG00000018069	CPSF2	100	99.361	ENSODEG00000008682	CPSF2	100	99.361	Octodon_degus
ENSCJAG00000018069	CPSF2	100	86.185	ENSONIG00000005901	cpsf2	100	86.185	Oreochromis_niloticus
ENSCJAG00000018069	CPSF2	100	98.465	ENSOANG00000003822	CPSF2	100	98.465	Ornithorhynchus_anatinus
ENSCJAG00000018069	CPSF2	100	99.233	ENSOCUG00000005713	CPSF2	100	99.233	Oryctolagus_cuniculus
ENSCJAG00000018069	CPSF2	100	80.228	ENSORLG00000011628	cpsf2	100	80.228	Oryzias_latipes
ENSCJAG00000018069	CPSF2	100	85.044	ENSORLG00020016980	cpsf2	100	85.044	Oryzias_latipes_hni
ENSCJAG00000018069	CPSF2	100	85.044	ENSORLG00015011910	cpsf2	100	85.044	Oryzias_latipes_hsok
ENSCJAG00000018069	CPSF2	100	84.284	ENSOMEG00000022876	cpsf2	100	84.284	Oryzias_melastigma
ENSCJAG00000018069	CPSF2	100	96.556	ENSOARG00000012889	CPSF2	100	96.556	Ovis_aries
ENSCJAG00000018069	CPSF2	100	99.744	ENSPPAG00000039666	CPSF2	100	99.744	Pan_paniscus
ENSCJAG00000018069	CPSF2	99	99.488	ENSPPRG00000010869	CPSF2	100	99.488	Panthera_pardus
ENSCJAG00000018069	CPSF2	100	99.488	ENSPTIG00000021202	CPSF2	100	99.488	Panthera_tigris_altaica
ENSCJAG00000018069	CPSF2	100	99.744	ENSPTRG00000006651	CPSF2	100	99.744	Pan_troglodytes
ENSCJAG00000018069	CPSF2	100	99.872	ENSPANG00000017417	CPSF2	100	99.872	Papio_anubis
ENSCJAG00000018069	CPSF2	100	82.211	ENSPKIG00000021453	cpsf2	100	82.211	Paramormyrops_kingsleyae
ENSCJAG00000018069	CPSF2	100	95.785	ENSPSIG00000006289	CPSF2	100	95.785	Pelodiscus_sinensis
ENSCJAG00000018069	CPSF2	76	79.734	ENSPMGG00000002511	cpsf2	100	80.066	Periophthalmus_magnuspinnatus
ENSCJAG00000018069	CPSF2	100	98.721	ENSPEMG00000007917	Cpsf2	100	98.721	Peromyscus_maniculatus_bairdii
ENSCJAG00000018069	CPSF2	100	74.336	ENSPMAG00000006205	cpsf2	100	74.336	Petromyzon_marinus
ENSCJAG00000018069	CPSF2	100	99.105	ENSPCIG00000011393	CPSF2	100	99.105	Phascolarctos_cinereus
ENSCJAG00000018069	CPSF2	100	85.551	ENSPFOG00000018648	cpsf2	100	85.551	Poecilia_formosa
ENSCJAG00000018069	CPSF2	100	85.551	ENSPLAG00000019199	cpsf2	99	85.551	Poecilia_latipinna
ENSCJAG00000018069	CPSF2	96	85.921	ENSPMEG00000012100	cpsf2	100	85.294	Poecilia_mexicana
ENSCJAG00000018069	CPSF2	100	85.425	ENSPREG00000008960	cpsf2	100	85.425	Poecilia_reticulata
ENSCJAG00000018069	CPSF2	63	99.597	ENSPPYG00000029685	-	100	99.597	Pongo_abelii
ENSCJAG00000018069	CPSF2	100	99.233	ENSPCAG00000012477	CPSF2	100	99.233	Procavia_capensis
ENSCJAG00000018069	CPSF2	100	99.744	ENSPCOG00000026387	CPSF2	100	99.744	Propithecus_coquereli
ENSCJAG00000018069	CPSF2	65	100.000	ENSPVAG00000004223	CPSF2	65	100.000	Pteropus_vampyrus
ENSCJAG00000018069	CPSF2	100	85.443	ENSPNYG00000023356	cpsf2	100	85.443	Pundamilia_nyererei
ENSCJAG00000018069	CPSF2	100	86.912	ENSPNAG00000001849	cpsf2	100	86.912	Pygocentrus_nattereri
ENSCJAG00000018069	CPSF2	100	98.338	ENSRNOG00000005733	Cpsf2	100	98.338	Rattus_norvegicus
ENSCJAG00000018069	CPSF2	100	99.872	ENSRBIG00000044792	CPSF2	100	99.872	Rhinopithecus_bieti
ENSCJAG00000018069	CPSF2	100	99.872	ENSRROG00000034875	CPSF2	100	99.872	Rhinopithecus_roxellana
ENSCJAG00000018069	CPSF2	100	100.000	ENSSBOG00000024571	CPSF2	100	100.000	Saimiri_boliviensis_boliviensis
ENSCJAG00000018069	CPSF2	100	99.233	ENSSHAG00000010458	CPSF2	100	99.233	Sarcophilus_harrisii
ENSCJAG00000018069	CPSF2	100	87.421	ENSSFOG00015002117	cpsf2	100	87.421	Scleropages_formosus
ENSCJAG00000018069	CPSF2	100	84.284	ENSSMAG00000002001	cpsf2	100	84.284	Scophthalmus_maximus
ENSCJAG00000018069	CPSF2	100	86.312	ENSSDUG00000004084	cpsf2	100	86.312	Seriola_dumerili
ENSCJAG00000018069	CPSF2	100	85.805	ENSSLDG00000024330	cpsf2	100	85.805	Seriola_lalandi_dorsalis
ENSCJAG00000018069	CPSF2	58	100.000	ENSSARG00000009784	-	63	100.000	Sorex_araneus
ENSCJAG00000018069	CPSF2	100	95.785	ENSSPUG00000013485	CPSF2	100	95.785	Sphenodon_punctatus
ENSCJAG00000018069	CPSF2	100	85.425	ENSSPAG00000013284	cpsf2	100	85.425	Stegastes_partitus
ENSCJAG00000018069	CPSF2	100	99.488	ENSSSCG00000002447	CPSF2	100	99.488	Sus_scrofa
ENSCJAG00000018069	CPSF2	100	96.424	ENSTGUG00000012571	-	100	96.424	Taeniopygia_guttata
ENSCJAG00000018069	CPSF2	100	84.918	ENSTRUG00000003742	cpsf2	100	84.918	Takifugu_rubripes
ENSCJAG00000018069	CPSF2	100	83.439	ENSTNIG00000012228	cpsf2	100	84.197	Tetraodon_nigroviridis
ENSCJAG00000018069	CPSF2	91	100.000	ENSTBEG00000004530	CPSF2	94	100.000	Tupaia_belangeri
ENSCJAG00000018069	CPSF2	88	100.000	ENSTTRG00000008697	CPSF2	88	100.000	Tursiops_truncatus
ENSCJAG00000018069	CPSF2	100	99.744	ENSUAMG00000028071	CPSF2	100	99.744	Ursus_americanus
ENSCJAG00000018069	CPSF2	100	99.744	ENSUMAG00000005029	CPSF2	100	99.744	Ursus_maritimus
ENSCJAG00000018069	CPSF2	99	99.616	ENSVPAG00000003503	CPSF2	100	99.616	Vicugna_pacos
ENSCJAG00000018069	CPSF2	100	99.616	ENSVVUG00000024642	CPSF2	100	99.616	Vulpes_vulpes
ENSCJAG00000018069	CPSF2	100	92.337	ENSXETG00000010289	cpsf2	100	92.337	Xenopus_tropicalis
ENSCJAG00000018069	CPSF2	100	85.932	ENSXCOG00000001764	cpsf2	100	85.932	Xiphophorus_couchianus
ENSCJAG00000018069	CPSF2	100	86.058	ENSXMAG00000017048	cpsf2	100	86.058	Xiphophorus_maculatus