EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000018085 (Gene tree)
Gene ID: 100395851
Gene Symbol: TNPO3
Alias: IPO12|LGMD1F|MTR10A|TRN-SR|TRN-SR2
Full Name: transportin 3
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 91853 bases
Position: chrNTIC01002224.1:113789872-113881724
Accession: 17103
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000063845	Xpo1	PF08389.12	2.3e-28	1	1
ENSCJAP00000033563	Xpo1	PF08389.12	2.4e-28	1	1
ENSCJAP00000033553	Xpo1	PF08389.12	2.5e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000035455	TNPO3-203	2580	-	ENSCJAP00000033563	859 (aa)	-	F6SUW5
ENSCJAT00000069456	TNPO3-201	3726	-	ENSCJAP00000063845	923 (aa)	-	U3CGE3
ENSCJAT00000035445	TNPO3-202	2877	-	ENSCJAP00000033553	958 (aa)	-	F6T5B6

Gene Model

Click here to download ENSCJAG00000018085's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000018085's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000018085	TNPO3	100	99.783	ENSG00000064419	TNPO3	100	99.783	Homo_sapiens
ENSCJAG00000018085	TNPO3	100	86.674	ENSAPOG00000018347	tnpo3	100	86.674	Acanthochromis_polyacanthus
ENSCJAG00000018085	TNPO3	99	96.118	ENSAMEG00000005135	TNPO3	98	96.118	Ailuropoda_melanoleuca
ENSCJAG00000018085	TNPO3	96	84.258	ENSACIG00000005897	tnpo3	99	84.258	Amphilophus_citrinellus
ENSCJAG00000018085	TNPO3	100	86.782	ENSAOCG00000008264	tnpo3	100	86.782	Amphiprion_ocellaris
ENSCJAG00000018085	TNPO3	96	86.750	ENSAPEG00000024300	tnpo3	100	86.750	Amphiprion_percula
ENSCJAG00000018085	TNPO3	100	85.699	ENSATEG00000003197	tnpo3	100	85.699	Anabas_testudineus
ENSCJAG00000018085	TNPO3	73	94.340	ENSAPLG00000005946	TNPO3	91	94.340	Anas_platyrhynchos
ENSCJAG00000018085	TNPO3	82	92.773	ENSACAG00000013470	TNPO3	95	92.773	Anolis_carolinensis
ENSCJAG00000018085	TNPO3	100	99.783	ENSANAG00000037940	TNPO3	100	99.783	Aotus_nancymaae
ENSCJAG00000018085	TNPO3	100	86.111	ENSACLG00000005561	tnpo3	100	86.024	Astatotilapia_calliptera
ENSCJAG00000018085	TNPO3	100	86.349	ENSAMXG00000016236	tnpo3	100	86.349	Astyanax_mexicanus
ENSCJAG00000018085	TNPO3	100	98.917	ENSBTAG00000004992	TNPO3	100	98.917	Bos_taurus
ENSCJAG00000018085	TNPO3	84	31.754	WBGene00006647	tsr-1	76	30.864	Caenorhabditis_elegans
ENSCJAG00000018085	TNPO3	100	99.675	ENSCAFG00000001543	TNPO3	100	99.675	Canis_familiaris
ENSCJAG00000018085	TNPO3	100	99.675	ENSCAFG00020022462	TNPO3	99	99.243	Canis_lupus_dingo
ENSCJAG00000018085	TNPO3	100	98.917	ENSCHIG00000011721	TNPO3	100	98.917	Capra_hircus
ENSCJAG00000018085	TNPO3	100	99.675	ENSTSYG00000002989	TNPO3	100	99.675	Carlito_syrichta
ENSCJAG00000018085	TNPO3	70	97.849	ENSCAPG00000005843	TNPO3	91	97.849	Cavia_aperea
ENSCJAG00000018085	TNPO3	100	99.025	ENSCPOG00000039784	TNPO3	100	99.025	Cavia_porcellus
ENSCJAG00000018085	TNPO3	100	99.892	ENSCCAG00000033826	TNPO3	100	99.892	Cebus_capucinus
ENSCJAG00000018085	TNPO3	100	99.783	ENSCATG00000030018	TNPO3	100	99.783	Cercocebus_atys
ENSCJAG00000018085	TNPO3	100	98.490	ENSCLAG00000016298	TNPO3	100	98.490	Chinchilla_lanigera
ENSCJAG00000018085	TNPO3	100	99.675	ENSCSAG00000009966	TNPO3	100	99.675	Chlorocebus_sabaeus
ENSCJAG00000018085	TNPO3	99	70.873	ENSCHOG00000011547	TNPO3	99	70.873	Choloepus_hoffmanni
ENSCJAG00000018085	TNPO3	93	94.749	ENSCPBG00000017497	TNPO3	100	94.749	Chrysemys_picta_bellii
ENSCJAG00000018085	TNPO3	99	48.911	ENSCING00000005042	-	99	48.911	Ciona_intestinalis
ENSCJAG00000018085	TNPO3	99	47.110	ENSCSAVG00000008623	-	94	54.182	Ciona_savignyi
ENSCJAG00000018085	TNPO3	100	99.783	ENSCANG00000033070	TNPO3	100	99.783	Colobus_angolensis_palliatus
ENSCJAG00000018085	TNPO3	100	99.242	ENSCGRG00001015925	Tnpo3	100	99.242	Cricetulus_griseus_chok1gshd
ENSCJAG00000018085	TNPO3	100	99.242	ENSCGRG00000010379	Tnpo3	100	99.242	Cricetulus_griseus_crigri
ENSCJAG00000018085	TNPO3	100	85.049	ENSCSEG00000005952	tnpo3	100	85.049	Cynoglossus_semilaevis
ENSCJAG00000018085	TNPO3	100	85.807	ENSCVAG00000020285	tnpo3	100	85.807	Cyprinodon_variegatus
ENSCJAG00000018085	TNPO3	100	86.083	ENSDARG00000045680	tnpo3	100	85.915	Danio_rerio
ENSCJAG00000018085	TNPO3	100	99.567	ENSDNOG00000002556	TNPO3	100	99.567	Dasypus_novemcinctus
ENSCJAG00000018085	TNPO3	62	97.409	ENSDORG00000002433	Tnpo3	95	97.409	Dipodomys_ordii
ENSCJAG00000018085	TNPO3	99	43.132	FBgn0031456	Tnpo-SR	99	42.734	Drosophila_melanogaster
ENSCJAG00000018085	TNPO3	95	99.560	ENSETEG00000002101	TNPO3	90	99.782	Echinops_telfairi
ENSCJAG00000018085	TNPO3	100	74.722	ENSEBUG00000016931	tnpo3	100	71.289	Eptatretus_burgeri
ENSCJAG00000018085	TNPO3	100	99.458	ENSEASG00005008677	TNPO3	100	99.458	Equus_asinus_asinus
ENSCJAG00000018085	TNPO3	100	99.458	ENSECAG00000012815	TNPO3	100	99.458	Equus_caballus
ENSCJAG00000018085	TNPO3	61	32.701	ENSEEUG00000011681	IPO13	73	30.493	Erinaceus_europaeus
ENSCJAG00000018085	TNPO3	99	99.155	ENSEEUG00000005178	TNPO3	98	93.404	Erinaceus_europaeus
ENSCJAG00000018085	TNPO3	99	86.834	ENSELUG00000012153	tnpo3	99	86.834	Esox_lucius
ENSCJAG00000018085	TNPO3	100	99.767	ENSFCAG00000018186	TNPO3	100	99.767	Felis_catus
ENSCJAG00000018085	TNPO3	96	89.521	ENSFALG00000010667	TNPO3	100	89.521	Ficedula_albicollis
ENSCJAG00000018085	TNPO3	100	98.919	ENSFDAG00000019578	TNPO3	100	98.919	Fukomys_damarensis
ENSCJAG00000018085	TNPO3	100	85.807	ENSFHEG00000012859	tnpo3	100	85.807	Fundulus_heteroclitus
ENSCJAG00000018085	TNPO3	100	85.699	ENSGMOG00000007324	tnpo3	100	85.699	Gadus_morhua
ENSCJAG00000018085	TNPO3	61	94.306	ENSGALG00000039420	TNPO3	98	94.306	Gallus_gallus
ENSCJAG00000018085	TNPO3	100	85.915	ENSGACG00000000699	tnpo3	100	85.915	Gasterosteus_aculeatus
ENSCJAG00000018085	TNPO3	93	94.632	ENSGAGG00000006777	TNPO3	100	94.632	Gopherus_agassizii
ENSCJAG00000018085	TNPO3	100	99.783	ENSGGOG00000008339	TNPO3	100	99.783	Gorilla_gorilla
ENSCJAG00000018085	TNPO3	100	86.111	ENSHBUG00000008351	tnpo3	100	86.024	Haplochromis_burtoni
ENSCJAG00000018085	TNPO3	100	99.458	ENSHGLG00000004463	TNPO3	100	99.458	Heterocephalus_glaber_female
ENSCJAG00000018085	TNPO3	100	99.458	ENSHGLG00100005509	TNPO3	100	99.458	Heterocephalus_glaber_male
ENSCJAG00000018085	TNPO3	100	85.157	ENSHCOG00000007221	tnpo3	100	85.157	Hippocampus_comes
ENSCJAG00000018085	TNPO3	100	86.111	ENSIPUG00000014979	TNPO3	99	85.265	Ictalurus_punctatus
ENSCJAG00000018085	TNPO3	100	99.567	ENSSTOG00000004885	TNPO3	100	99.567	Ictidomys_tridecemlineatus
ENSCJAG00000018085	TNPO3	100	92.125	ENSJJAG00000013530	Tnpo3	100	92.125	Jaculus_jaculus
ENSCJAG00000018085	TNPO3	100	86.024	ENSKMAG00000010497	tnpo3	100	86.024	Kryptolebias_marmoratus
ENSCJAG00000018085	TNPO3	96	81.880	ENSLBEG00000011988	-	99	81.880	Labrus_bergylta
ENSCJAG00000018085	TNPO3	95	86.944	ENSLBEG00000016595	tnpo3	100	84.485	Labrus_bergylta
ENSCJAG00000018085	TNPO3	84	90.270	ENSLACG00000002351	TNPO3	99	90.270	Latimeria_chalumnae
ENSCJAG00000018085	TNPO3	100	87.757	ENSLOCG00000015556	tnpo3	100	87.757	Lepisosteus_oculatus
ENSCJAG00000018085	TNPO3	100	98.921	ENSLAFG00000002738	TNPO3	100	98.921	Loxodonta_africana
ENSCJAG00000018085	TNPO3	100	99.783	ENSMFAG00000032385	TNPO3	100	99.783	Macaca_fascicularis
ENSCJAG00000018085	TNPO3	100	99.783	ENSMMUG00000004311	TNPO3	100	99.783	Macaca_mulatta
ENSCJAG00000018085	TNPO3	100	99.783	ENSMNEG00000045277	TNPO3	100	99.783	Macaca_nemestrina
ENSCJAG00000018085	TNPO3	100	99.783	ENSMLEG00000037881	TNPO3	100	99.783	Mandrillus_leucophaeus
ENSCJAG00000018085	TNPO3	100	86.349	ENSMAMG00000021096	tnpo3	100	86.349	Mastacembelus_armatus
ENSCJAG00000018085	TNPO3	100	86.111	ENSMZEG00005015084	tnpo3	100	86.024	Maylandia_zebra
ENSCJAG00000018085	TNPO3	78	89.241	ENSMGAG00000002839	TNPO3	99	89.241	Meleagris_gallopavo
ENSCJAG00000018085	TNPO3	100	99.133	ENSMAUG00000013463	Tnpo3	100	99.133	Mesocricetus_auratus
ENSCJAG00000018085	TNPO3	100	99.767	ENSMICG00000000140	TNPO3	100	99.767	Microcebus_murinus
ENSCJAG00000018085	TNPO3	69	35.659	ENSMICG00000011003	IPO13	77	33.136	Microcebus_murinus
ENSCJAG00000018085	TNPO3	100	99.242	ENSMOCG00000013264	Tnpo3	100	99.242	Microtus_ochrogaster
ENSCJAG00000018085	TNPO3	100	85.482	ENSMMOG00000005887	tnpo3	100	85.482	Mola_mola
ENSCJAG00000018085	TNPO3	100	97.616	ENSMODG00000014700	TNPO3	100	97.616	Monodelphis_domestica
ENSCJAG00000018085	TNPO3	100	86.083	ENSMALG00000006675	tnpo3	100	85.807	Monopterus_albus
ENSCJAG00000018085	TNPO3	100	99.350	MGP_CAROLIEiJ_G0028176	Tnpo3	100	99.350	Mus_caroli
ENSCJAG00000018085	TNPO3	100	99.350	ENSMUSG00000012535	Tnpo3	100	99.350	Mus_musculus
ENSCJAG00000018085	TNPO3	100	99.242	MGP_PahariEiJ_G0021934	Tnpo3	100	99.242	Mus_pahari
ENSCJAG00000018085	TNPO3	100	99.242	MGP_SPRETEiJ_G0029176	Tnpo3	100	99.242	Mus_spretus
ENSCJAG00000018085	TNPO3	100	99.675	ENSMPUG00000006021	TNPO3	100	99.675	Mustela_putorius_furo
ENSCJAG00000018085	TNPO3	100	89.274	ENSMLUG00000000947	TNPO3	97	98.555	Myotis_lucifugus
ENSCJAG00000018085	TNPO3	100	99.567	ENSNGAG00000008722	Tnpo3	100	99.567	Nannospalax_galili
ENSCJAG00000018085	TNPO3	100	85.089	ENSNBRG00000019001	tnpo3	100	85.682	Neolamprologus_brichardi
ENSCJAG00000018085	TNPO3	100	99.651	ENSNLEG00000012491	TNPO3	100	99.651	Nomascus_leucogenys
ENSCJAG00000018085	TNPO3	92	80.704	ENSMEUG00000002445	TNPO3	91	80.704	Notamacropus_eugenii
ENSCJAG00000018085	TNPO3	91	99.457	ENSOPRG00000006163	TNPO3	90	99.457	Ochotona_princeps
ENSCJAG00000018085	TNPO3	98	99.002	ENSODEG00000012826	TNPO3	100	99.002	Octodon_degus
ENSCJAG00000018085	TNPO3	100	86.241	ENSONIG00000007604	tnpo3	100	86.241	Oreochromis_niloticus
ENSCJAG00000018085	TNPO3	95	93.160	ENSOANG00000011451	TNPO3	100	93.160	Ornithorhynchus_anatinus
ENSCJAG00000018085	TNPO3	99	95.693	ENSOCUG00000010105	TNPO3	99	95.693	Oryctolagus_cuniculus
ENSCJAG00000018085	TNPO3	100	85.278	ENSORLG00000029369	tnpo3	100	84.940	Oryzias_latipes
ENSCJAG00000018085	TNPO3	100	85.278	ENSORLG00020003464	tnpo3	100	84.940	Oryzias_latipes_hni
ENSCJAG00000018085	TNPO3	100	85.556	ENSORLG00015002610	tnpo3	100	85.049	Oryzias_latipes_hsok
ENSCJAG00000018085	TNPO3	100	85.556	ENSOMEG00000021006	tnpo3	100	85.157	Oryzias_melastigma
ENSCJAG00000018085	TNPO3	100	99.458	ENSOGAG00000015340	TNPO3	100	99.458	Otolemur_garnettii
ENSCJAG00000018085	TNPO3	100	98.700	ENSOARG00000004026	TNPO3	100	98.700	Ovis_aries
ENSCJAG00000018085	TNPO3	100	99.783	ENSPPAG00000034975	TNPO3	100	99.783	Pan_paniscus
ENSCJAG00000018085	TNPO3	100	99.767	ENSPPRG00000002050	TNPO3	100	99.767	Panthera_pardus
ENSCJAG00000018085	TNPO3	100	99.767	ENSPTIG00000016167	TNPO3	100	99.767	Panthera_tigris_altaica
ENSCJAG00000018085	TNPO3	100	99.783	ENSPTRG00000019676	TNPO3	100	99.783	Pan_troglodytes
ENSCJAG00000018085	TNPO3	100	99.767	ENSPANG00000022226	TNPO3	100	99.767	Papio_anubis
ENSCJAG00000018085	TNPO3	100	83.857	ENSPKIG00000023234	tnpo3	100	83.857	Paramormyrops_kingsleyae
ENSCJAG00000018085	TNPO3	100	81.389	ENSPKIG00000008628	-	100	80.778	Paramormyrops_kingsleyae
ENSCJAG00000018085	TNPO3	62	79.577	ENSPMGG00000009763	tnpo3	99	79.577	Periophthalmus_magnuspinnatus
ENSCJAG00000018085	TNPO3	100	99.133	ENSPEMG00000000422	Tnpo3	100	99.133	Peromyscus_maniculatus_bairdii
ENSCJAG00000018085	TNPO3	95	74.722	ENSPMAG00000008621	tnpo3	100	72.820	Petromyzon_marinus
ENSCJAG00000018085	TNPO3	100	97.075	ENSPCIG00000011366	TNPO3	100	97.075	Phascolarctos_cinereus
ENSCJAG00000018085	TNPO3	100	85.885	ENSPFOG00000013592	tnpo3	99	85.699	Poecilia_formosa
ENSCJAG00000018085	TNPO3	100	85.885	ENSPLAG00000010188	tnpo3	100	85.699	Poecilia_latipinna
ENSCJAG00000018085	TNPO3	100	85.885	ENSPMEG00000022731	tnpo3	100	85.807	Poecilia_mexicana
ENSCJAG00000018085	TNPO3	100	99.783	ENSPPYG00000017990	TNPO3	100	99.783	Pongo_abelii
ENSCJAG00000018085	TNPO3	99	91.549	ENSPCAG00000010158	TNPO3	98	88.353	Procavia_capensis
ENSCJAG00000018085	TNPO3	89	99.671	ENSPCOG00000023901	TNPO3	97	99.671	Propithecus_coquereli
ENSCJAG00000018085	TNPO3	96	99.383	ENSPVAG00000015757	TNPO3	98	95.068	Pteropus_vampyrus
ENSCJAG00000018085	TNPO3	100	86.111	ENSPNYG00000002349	tnpo3	100	86.024	Pundamilia_nyererei
ENSCJAG00000018085	TNPO3	100	87.107	ENSPNAG00000001142	tnpo3	100	87.107	Pygocentrus_nattereri
ENSCJAG00000018085	TNPO3	100	99.133	ENSRNOG00000021758	Tnpo3	100	99.133	Rattus_norvegicus
ENSCJAG00000018085	TNPO3	100	99.675	ENSRBIG00000042549	TNPO3	100	99.675	Rhinopithecus_bieti
ENSCJAG00000018085	TNPO3	100	99.675	ENSRROG00000039264	TNPO3	100	99.675	Rhinopithecus_roxellana
ENSCJAG00000018085	TNPO3	100	82.305	ENSSBOG00000029642	TNPO3	99	84.171	Saimiri_boliviensis_boliviensis
ENSCJAG00000018085	TNPO3	96	97.848	ENSSHAG00000006837	TNPO3	100	97.848	Sarcophilus_harrisii
ENSCJAG00000018085	TNPO3	100	81.090	ENSSFOG00015004256	tnpo3	100	81.090	Scleropages_formosus
ENSCJAG00000018085	TNPO3	100	85.278	ENSSFOG00015001474	tnpo3	100	84.940	Scleropages_formosus
ENSCJAG00000018085	TNPO3	100	86.349	ENSSMAG00000010422	tnpo3	97	86.349	Scophthalmus_maximus
ENSCJAG00000018085	TNPO3	100	86.782	ENSSDUG00000004850	tnpo3	100	86.782	Seriola_dumerili
ENSCJAG00000018085	TNPO3	100	86.782	ENSSLDG00000016927	tnpo3	100	86.782	Seriola_lalandi_dorsalis
ENSCJAG00000018085	TNPO3	95	86.029	ENSSARG00000013893	TNPO3	98	86.029	Sorex_araneus
ENSCJAG00000018085	TNPO3	99	87.662	ENSSPUG00000007457	TNPO3	99	87.581	Sphenodon_punctatus
ENSCJAG00000018085	TNPO3	79	87.741	ENSSPAG00000014209	tnpo3	99	87.741	Stegastes_partitus
ENSCJAG00000018085	TNPO3	100	99.567	ENSSSCG00000016572	TNPO3	100	99.650	Sus_scrofa
ENSCJAG00000018085	TNPO3	100	84.233	ENSTNIG00000003347	tnpo3	100	84.233	Tetraodon_nigroviridis
ENSCJAG00000018085	TNPO3	94	99.676	ENSTBEG00000007220	TNPO3	90	99.676	Tupaia_belangeri
ENSCJAG00000018085	TNPO3	99	84.575	ENSTTRG00000014618	TNPO3	98	84.575	Tursiops_truncatus
ENSCJAG00000018085	TNPO3	100	99.675	ENSUAMG00000021281	TNPO3	100	99.675	Ursus_americanus
ENSCJAG00000018085	TNPO3	100	99.675	ENSUMAG00000006882	TNPO3	100	99.675	Ursus_maritimus
ENSCJAG00000018085	TNPO3	80	93.519	ENSVPAG00000006166	TNPO3	88	88.360	Vicugna_pacos
ENSCJAG00000018085	TNPO3	100	99.675	ENSVVUG00000011004	TNPO3	100	99.594	Vulpes_vulpes
ENSCJAG00000018085	TNPO3	100	83.045	ENSXETG00000015009	tnpo3	100	83.045	Xenopus_tropicalis
ENSCJAG00000018085	TNPO3	100	85.482	ENSXMAG00000013062	tnpo3	100	85.482	Xiphophorus_maculatus