EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000018155 (Gene tree)
Gene ID: 100395300
Gene Symbol: TARBP1
Alias: TRM3|TRMT3|TRP-185
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 84833 bases
Position: chrNTIC01010001.1:45450824-45535656
Accession: 11568
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000033617	SpoU_methylase	PF00588.19	1.1e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000035514	TARBP1-201	8337	-	ENSCJAP00000033617	1621 (aa)	-	F6RKH4

Gene Model

Click here to download ENSCJAG00000018155's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000018155's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000018155	TARBP1	100	94.201	ENSG00000059588	TARBP1	100	94.201	Homo_sapiens
ENSCJAG00000018155	TARBP1	99	42.030	ENSAPOG00000016419	si:dkey-85a20.4	99	41.910	Acanthochromis_polyacanthus
ENSCJAG00000018155	TARBP1	84	84.806	ENSAMEG00000003359	TARBP1	100	84.806	Ailuropoda_melanoleuca
ENSCJAG00000018155	TARBP1	91	43.869	ENSATEG00000020266	si:dkey-85a20.4	99	41.771	Anabas_testudineus
ENSCJAG00000018155	TARBP1	84	67.516	ENSAPLG00000007666	TARBP1	99	68.417	Anas_platyrhynchos
ENSCJAG00000018155	TARBP1	99	58.629	ENSACAG00000001142	TARBP1	99	58.813	Anolis_carolinensis
ENSCJAG00000018155	TARBP1	99	83.231	ENSBTAG00000004517	TARBP1	99	83.477	Bos_taurus
ENSCJAG00000018155	TARBP1	88	84.808	ENSCAFG00000011533	TARBP1	100	85.099	Canis_familiaris
ENSCJAG00000018155	TARBP1	99	83.436	ENSCAFG00020027141	TARBP1	99	84.049	Canis_lupus_dingo
ENSCJAG00000018155	TARBP1	99	81.835	ENSCHIG00000011437	TARBP1	99	82.451	Capra_hircus
ENSCJAG00000018155	TARBP1	81	87.786	ENSTSYG00000010382	TARBP1	97	87.481	Carlito_syrichta
ENSCJAG00000018155	TARBP1	79	68.833	ENSCAPG00000010831	TARBP1	99	68.574	Cavia_aperea
ENSCJAG00000018155	TARBP1	99	75.849	ENSCPOG00000013995	TARBP1	99	75.788	Cavia_porcellus
ENSCJAG00000018155	TARBP1	100	96.299	ENSCCAG00000037278	TARBP1	100	96.299	Cebus_capucinus
ENSCJAG00000018155	TARBP1	100	93.893	ENSCATG00000011754	TARBP1	100	93.893	Cercocebus_atys
ENSCJAG00000018155	TARBP1	83	80.000	ENSCLAG00000003655	TARBP1	99	80.000	Chinchilla_lanigera
ENSCJAG00000018155	TARBP1	79	94.557	ENSCSAG00000010100	TARBP1	100	94.557	Chlorocebus_sabaeus
ENSCJAG00000018155	TARBP1	95	65.288	ENSCPBG00000005587	TARBP1	99	65.508	Chrysemys_picta_bellii
ENSCJAG00000018155	TARBP1	84	94.632	ENSCANG00000034343	TARBP1	100	94.632	Colobus_angolensis_palliatus
ENSCJAG00000018155	TARBP1	99	73.700	ENSCGRG00001016690	Tarbp1	99	73.577	Cricetulus_griseus_chok1gshd
ENSCJAG00000018155	TARBP1	92	75.275	ENSCGRG00000016893	Tarbp1	99	75.925	Cricetulus_griseus_crigri
ENSCJAG00000018155	TARBP1	99	40.182	ENSCSEG00000005255	si:dkey-85a20.4	93	48.594	Cynoglossus_semilaevis
ENSCJAG00000018155	TARBP1	85	46.406	ENSDARG00000079055	si:dkey-85a20.4	99	54.577	Danio_rerio
ENSCJAG00000018155	TARBP1	99	82.669	ENSDNOG00000008637	TARBP1	99	82.367	Dasypus_novemcinctus
ENSCJAG00000018155	TARBP1	80	73.920	ENSDORG00000007984	Tarbp1	100	73.920	Dipodomys_ordii
ENSCJAG00000018155	TARBP1	99	86.700	ENSEASG00005000252	TARBP1	99	86.700	Equus_asinus_asinus
ENSCJAG00000018155	TARBP1	99	86.700	ENSECAG00000023673	TARBP1	99	87.199	Equus_caballus
ENSCJAG00000018155	TARBP1	86	44.874	ENSELUG00000012193	si:dkey-85a20.4	87	44.944	Esox_lucius
ENSCJAG00000018155	TARBP1	99	83.077	ENSFCAG00000014183	TARBP1	99	83.005	Felis_catus
ENSCJAG00000018155	TARBP1	80	68.175	ENSFALG00000013565	TARBP1	99	68.018	Ficedula_albicollis
ENSCJAG00000018155	TARBP1	79	75.554	ENSFDAG00000001308	TARBP1	99	75.477	Fukomys_damarensis
ENSCJAG00000018155	TARBP1	99	36.248	ENSFHEG00000007565	si:dkey-85a20.4	94	53.261	Fundulus_heteroclitus
ENSCJAG00000018155	TARBP1	84	43.278	ENSGMOG00000004549	si:dkey-85a20.4	99	43.350	Gadus_morhua
ENSCJAG00000018155	TARBP1	99	58.820	ENSGALG00000011000	TARBP1	100	59.594	Gallus_gallus
ENSCJAG00000018155	TARBP1	99	41.297	ENSGAFG00000007387	si:dkey-85a20.4	99	41.176	Gambusia_affinis
ENSCJAG00000018155	TARBP1	86	44.864	ENSGACG00000005865	si:dkey-85a20.4	99	44.811	Gasterosteus_aculeatus
ENSCJAG00000018155	TARBP1	99	65.707	ENSGAGG00000012102	TARBP1	100	67.034	Gopherus_agassizii
ENSCJAG00000018155	TARBP1	85	91.703	ENSGGOG00000022879	TARBP1	99	91.703	Gorilla_gorilla
ENSCJAG00000018155	TARBP1	86	46.111	ENSHBUG00000008877	si:dkey-85a20.4	86	46.181	Haplochromis_burtoni
ENSCJAG00000018155	TARBP1	99	77.393	ENSHGLG00000011592	TARBP1	99	77.332	Heterocephalus_glaber_female
ENSCJAG00000018155	TARBP1	96	78.489	ENSHGLG00100015169	TARBP1	99	78.489	Heterocephalus_glaber_male
ENSCJAG00000018155	TARBP1	99	40.691	ENSIPUG00000005249	si:dkey-85a20.4	98	40.387	Ictalurus_punctatus
ENSCJAG00000018155	TARBP1	87	76.431	ENSSTOG00000032291	TARBP1	99	76.283	Ictidomys_tridecemlineatus
ENSCJAG00000018155	TARBP1	91	73.570	ENSJJAG00000017840	Tarbp1	99	73.570	Jaculus_jaculus
ENSCJAG00000018155	TARBP1	79	47.193	ENSKMAG00000017546	si:dkey-85a20.4	89	47.460	Kryptolebias_marmoratus
ENSCJAG00000018155	TARBP1	65	50.466	ENSLBEG00000012132	si:dkey-85a20.4	74	50.599	Labrus_bergylta
ENSCJAG00000018155	TARBP1	99	51.205	ENSLACG00000004337	TARBP1	99	51.055	Latimeria_chalumnae
ENSCJAG00000018155	TARBP1	99	46.739	ENSLOCG00000016214	si:dkey-85a20.4	100	46.622	Lepisosteus_oculatus
ENSCJAG00000018155	TARBP1	96	81.108	ENSLAFG00000011394	TARBP1	100	81.171	Loxodonta_africana
ENSCJAG00000018155	TARBP1	100	90.500	ENSMFAG00000041068	TARBP1	100	90.511	Macaca_fascicularis
ENSCJAG00000018155	TARBP1	100	91.374	ENSMMUG00000021703	TARBP1	100	91.569	Macaca_mulatta
ENSCJAG00000018155	TARBP1	100	94.139	ENSMNEG00000045002	TARBP1	100	94.139	Macaca_nemestrina
ENSCJAG00000018155	TARBP1	84	94.686	ENSMLEG00000044182	TARBP1	100	94.686	Mandrillus_leucophaeus
ENSCJAG00000018155	TARBP1	95	43.814	ENSMAMG00000021760	si:dkey-85a20.4	96	43.750	Mastacembelus_armatus
ENSCJAG00000018155	TARBP1	86	46.181	ENSMZEG00005005751	si:dkey-85a20.4	86	46.111	Maylandia_zebra
ENSCJAG00000018155	TARBP1	99	73.239	ENSMAUG00000020968	Tarbp1	99	73.115	Mesocricetus_auratus
ENSCJAG00000018155	TARBP1	99	79.151	ENSMICG00000015280	TARBP1	99	79.272	Microcebus_murinus
ENSCJAG00000018155	TARBP1	99	72.789	ENSMOCG00000004128	Tarbp1	99	72.851	Microtus_ochrogaster
ENSCJAG00000018155	TARBP1	99	41.088	ENSMMOG00000007795	si:dkey-85a20.4	99	40.871	Mola_mola
ENSCJAG00000018155	TARBP1	99	71.834	ENSMODG00000008504	TARBP1	100	71.670	Monodelphis_domestica
ENSCJAG00000018155	TARBP1	86	44.303	ENSMALG00000002916	si:dkey-85a20.4	88	43.950	Monopterus_albus
ENSCJAG00000018155	TARBP1	99	72.233	MGP_CAROLIEiJ_G0031729	Tarbp1	99	72.215	Mus_caroli
ENSCJAG00000018155	TARBP1	99	72.153	ENSMUSG00000090290	Tarbp1	99	72.092	Mus_musculus
ENSCJAG00000018155	TARBP1	99	72.497	MGP_PahariEiJ_G0023326	Tarbp1	99	72.435	Mus_pahari
ENSCJAG00000018155	TARBP1	99	72.301	MGP_SPRETEiJ_G0032846	Tarbp1	99	72.239	Mus_spretus
ENSCJAG00000018155	TARBP1	77	83.172	ENSMPUG00000002802	TARBP1	99	83.092	Mustela_putorius_furo
ENSCJAG00000018155	TARBP1	84	74.927	ENSMLUG00000002414	TARBP1	99	74.927	Myotis_lucifugus
ENSCJAG00000018155	TARBP1	100	94.633	ENSNLEG00000002518	TARBP1	100	94.633	Nomascus_leucogenys
ENSCJAG00000018155	TARBP1	67	76.907	ENSMEUG00000011370	-	67	76.907	Notamacropus_eugenii
ENSCJAG00000018155	TARBP1	71	85.406	ENSOPRG00000013822	TARBP1	71	85.406	Ochotona_princeps
ENSCJAG00000018155	TARBP1	99	72.761	ENSODEG00000005238	TARBP1	99	72.274	Octodon_degus
ENSCJAG00000018155	TARBP1	86	45.775	ENSONIG00000009789	si:dkey-85a20.4	99	45.845	Oreochromis_niloticus
ENSCJAG00000018155	TARBP1	100	84.544	ENSOCUG00000017418	TARBP1	99	84.421	Oryctolagus_cuniculus
ENSCJAG00000018155	TARBP1	99	40.324	ENSORLG00000010529	si:dkey-85a20.4	99	40.096	Oryzias_latipes
ENSCJAG00000018155	TARBP1	99	40.132	ENSORLG00020019264	si:dkey-85a20.4	99	39.904	Oryzias_latipes_hni
ENSCJAG00000018155	TARBP1	99	40.217	ENSORLG00015003276	si:dkey-85a20.4	99	39.988	Oryzias_latipes_hsok
ENSCJAG00000018155	TARBP1	99	83.529	ENSOGAG00000002379	TARBP1	100	83.282	Otolemur_garnettii
ENSCJAG00000018155	TARBP1	91	86.957	ENSOARG00000003434	TARBP1	99	82.881	Ovis_aries
ENSCJAG00000018155	TARBP1	84	95.451	ENSPPAG00000028097	TARBP1	100	95.451	Pan_paniscus
ENSCJAG00000018155	TARBP1	95	85.119	ENSPPRG00000013561	TARBP1	99	74.908	Panthera_pardus
ENSCJAG00000018155	TARBP1	83	85.565	ENSPTIG00000009281	TARBP1	99	85.565	Panthera_tigris_altaica
ENSCJAG00000018155	TARBP1	100	94.208	ENSPTRG00000002124	TARBP1	100	94.147	Pan_troglodytes
ENSCJAG00000018155	TARBP1	100	94.201	ENSPANG00000021933	TARBP1	100	94.201	Papio_anubis
ENSCJAG00000018155	TARBP1	100	43.203	ENSPKIG00000016716	si:dkey-85a20.4	99	43.144	Paramormyrops_kingsleyae
ENSCJAG00000018155	TARBP1	79	70.698	ENSPSIG00000010699	TARBP1	100	70.620	Pelodiscus_sinensis
ENSCJAG00000018155	TARBP1	97	75.502	ENSPEMG00000006888	Tarbp1	99	76.231	Peromyscus_maniculatus_bairdii
ENSCJAG00000018155	TARBP1	92	80.583	ENSPCIG00000029710	TARBP1	99	80.583	Phascolarctos_cinereus
ENSCJAG00000018155	TARBP1	86	45.039	ENSPFOG00000013020	si:dkey-85a20.4	99	44.968	Poecilia_formosa
ENSCJAG00000018155	TARBP1	99	41.876	ENSPLAG00000006044	si:dkey-85a20.4	99	41.860	Poecilia_latipinna
ENSCJAG00000018155	TARBP1	99	41.935	ENSPMEG00000017857	si:dkey-85a20.4	99	41.876	Poecilia_mexicana
ENSCJAG00000018155	TARBP1	99	41.935	ENSPREG00000022753	si:dkey-85a20.4	99	41.876	Poecilia_reticulata
ENSCJAG00000018155	TARBP1	91	95.762	ENSPPYG00000000102	TARBP1	100	95.762	Pongo_abelii
ENSCJAG00000018155	TARBP1	85	92.000	ENSPCAG00000004808	TARBP1	85	92.000	Procavia_capensis
ENSCJAG00000018155	TARBP1	99	85.441	ENSPCOG00000005666	TARBP1	100	85.133	Propithecus_coquereli
ENSCJAG00000018155	TARBP1	99	67.362	ENSPVAG00000014798	TARBP1	99	67.752	Pteropus_vampyrus
ENSCJAG00000018155	TARBP1	86	44.961	ENSPNYG00000019135	si:dkey-85a20.4	86	44.869	Pundamilia_nyererei
ENSCJAG00000018155	TARBP1	99	68.190	ENSRNOG00000053574	Tarbp1	99	68.067	Rattus_norvegicus
ENSCJAG00000018155	TARBP1	99	88.052	ENSRBIG00000043362	TARBP1	100	88.333	Rhinopithecus_bieti
ENSCJAG00000018155	TARBP1	98	92.848	ENSRROG00000029527	TARBP1	100	89.081	Rhinopithecus_roxellana
ENSCJAG00000018155	TARBP1	88	96.526	ENSSBOG00000034503	TARBP1	100	96.526	Saimiri_boliviensis_boliviensis
ENSCJAG00000018155	TARBP1	83	75.682	ENSSHAG00000000013	TARBP1	100	75.682	Sarcophilus_harrisii
ENSCJAG00000018155	TARBP1	84	46.104	ENSSFOG00015002660	si:dkey-85a20.4	97	47.006	Scleropages_formosus
ENSCJAG00000018155	TARBP1	91	44.337	ENSSMAG00000007081	si:dkey-85a20.4	99	42.673	Scophthalmus_maximus
ENSCJAG00000018155	TARBP1	99	41.255	ENSSDUG00000023566	si:dkey-85a20.4	99	40.989	Seriola_dumerili
ENSCJAG00000018155	TARBP1	99	43.011	ENSSLDG00000020200	si:dkey-85a20.4	99	42.857	Seriola_lalandi_dorsalis
ENSCJAG00000018155	TARBP1	89	84.793	ENSSARG00000012207	TARBP1	89	84.793	Sorex_araneus
ENSCJAG00000018155	TARBP1	99	64.242	ENSSPUG00000015364	TARBP1	100	64.120	Sphenodon_punctatus
ENSCJAG00000018155	TARBP1	91	44.160	ENSSPAG00000007213	si:dkey-85a20.4	91	43.992	Stegastes_partitus
ENSCJAG00000018155	TARBP1	99	84.615	ENSSSCG00000010160	TARBP1	99	84.851	Sus_scrofa
ENSCJAG00000018155	TARBP1	80	68.473	ENSTGUG00000010214	TARBP1	100	68.373	Taeniopygia_guttata
ENSCJAG00000018155	TARBP1	91	40.602	ENSTNIG00000016586	si:dkey-85a20.4	99	44.960	Tetraodon_nigroviridis
ENSCJAG00000018155	TARBP1	91	82.304	ENSTTRG00000008707	TARBP1	96	82.304	Tursiops_truncatus
ENSCJAG00000018155	TARBP1	82	84.413	ENSUMAG00000006730	TARBP1	99	84.413	Ursus_maritimus
ENSCJAG00000018155	TARBP1	80	89.691	ENSVPAG00000007665	TARBP1	87	89.691	Vicugna_pacos
ENSCJAG00000018155	TARBP1	85	85.116	ENSVVUG00000007460	TARBP1	97	85.043	Vulpes_vulpes
ENSCJAG00000018155	TARBP1	84	56.569	ENSXETG00000016224	tarbp1	99	56.496	Xenopus_tropicalis
ENSCJAG00000018155	TARBP1	78	49.046	ENSXCOG00000011779	si:dkey-85a20.4	94	48.840	Xiphophorus_couchianus
ENSCJAG00000018155	TARBP1	65	43.401	ENSXMAG00000009600	si:dkey-85a20.4	100	43.216	Xiphophorus_maculatus