EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000018245 (Gene tree)
Gene ID: 100405920
Gene Symbol: SETX
Alias: ALS4|AOA2|KIAA0625|SCAR1|Sen1
Full Name: senataxin
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 74867 bases
Position: chrNTIC01000001.1:36184946-36259812
Accession: 100405920
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000033847	UvrD-helicase	PF00580.21	6.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000035757	SETX-201	8037	-	ENSCJAP00000033847	2678 (aa)	XP_002743464	F6QXH7

Gene Model

Click here to download ENSCJAG00000018245's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000018245's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000018245	SETX	100	89.258	ENSG00000107290	SETX	100	89.557	Homo_sapiens
ENSCJAG00000018245	SETX	75	43.175	ENSAMXG00000014406	-	84	42.925	Astyanax_mexicanus
ENSCJAG00000018245	SETX	100	71.391	ENSCPOG00000001492	SETX	100	71.354	Cavia_porcellus
ENSCJAG00000018245	SETX	97	74.235	ENSCLAG00000012582	SETX	99	74.235	Chinchilla_lanigera
ENSCJAG00000018245	SETX	74	93.603	ENSETEG00000008111	-	74	93.603	Echinops_telfairi
ENSCJAG00000018245	SETX	91	81.814	ENSECAG00000012019	SETX	99	81.814	Equus_caballus
ENSCJAG00000018245	SETX	71	43.493	ENSELUG00000022536	-	77	43.493	Esox_lucius
ENSCJAG00000018245	SETX	100	77.274	ENSFCAG00000007102	SETX	100	77.200	Felis_catus
ENSCJAG00000018245	SETX	78	73.378	ENSFALG00000001464	SETX	86	73.378	Ficedula_albicollis
ENSCJAG00000018245	SETX	100	87.430	ENSGGOG00000027664	SETX	100	87.281	Gorilla_gorilla
ENSCJAG00000018245	SETX	65	46.768	ENSIPUG00000006685	setx	77	45.410	Ictalurus_punctatus
ENSCJAG00000018245	SETX	82	56.093	ENSLOCG00000004264	SETX	90	56.093	Lepisosteus_oculatus
ENSCJAG00000018245	SETX	99	67.029	ENSMOCG00000000848	Setx	99	67.732	Microtus_ochrogaster
ENSCJAG00000018245	SETX	100	71.572	MGP_PahariEiJ_G0024821	Setx	100	71.720	Mus_pahari
ENSCJAG00000018245	SETX	100	84.395	ENSNLEG00000012839	SETX	100	84.395	Nomascus_leucogenys
ENSCJAG00000018245	SETX	95	71.845	ENSOCUG00000005616	SETX	95	71.909	Oryctolagus_cuniculus
ENSCJAG00000018245	SETX	99	80.052	ENSOGAG00000013387	SETX	99	80.052	Otolemur_garnettii
ENSCJAG00000018245	SETX	100	88.553	ENSPPAG00000004108	SETX	100	88.441	Pan_paniscus
ENSCJAG00000018245	SETX	100	77.052	ENSPPRG00000012867	SETX	100	76.977	Panthera_pardus
ENSCJAG00000018245	SETX	100	76.912	ENSPTIG00000021101	SETX	100	76.837	Panthera_tigris_altaica
ENSCJAG00000018245	SETX	100	88.549	ENSPTRG00000021495	SETX	100	88.400	Pan_troglodytes
ENSCJAG00000018245	SETX	68	50.248	ENSPKIG00000025162	SETX	79	50.247	Paramormyrops_kingsleyae
ENSCJAG00000018245	SETX	59	93.103	ENSSARG00000002336	-	63	93.103	Sorex_araneus
ENSCJAG00000018245	SETX	94	59.635	ENSSPUG00000016332	SETX	88	71.451	Sphenodon_punctatus
ENSCJAG00000018245	SETX	99	75.278	ENSSSCG00000005724	SETX	99	75.390	Sus_scrofa
ENSCJAG00000018245	SETX	79	73.167	ENSTGUG00000005117	SETX	86	73.167	Taeniopygia_guttata
ENSCJAG00000018245	SETX	79	65.066	ENSXETG00000006254	setx	89	63.724	Xenopus_tropicalis