EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000018361 (Gene tree)
Gene ID: 100401730
Gene Symbol: -
Alias: -
Full Name: RALY heterogeneous nuclear ribonucleoprotein
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 8330 bases
Position: chrNTIC01034389.1:3075686-3084015
Accession: 100401730
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000034059	RRM_1	PF00076.22	1.5e-11	1	1
ENSCJAP00000042753	RRM_1	PF00076.22	1.7e-11	1	1
ENSCJAP00000034067	RRM_1	PF00076.22	2.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000035983	-	882	-	ENSCJAP00000034059	293 (aa)	XP_008993755	F6ZUD9
ENSCJAT00000054323	-	930	-	ENSCJAP00000042753	309 (aa)	XP_002747313	F6V468
ENSCJAT00000035991	-	1245	-	ENSCJAP00000034067	411 (aa)	-	F6ZTR5

Gene Model

Click here to download ENSCJAG00000018361's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000018361's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000018361	-	71	52.966	ENSCJAG00000009354	HNRNPC	99	49.565
ENSCJAG00000018361	-	72	68.584	ENSCJAG00000000402	RALYL	79	67.111
ENSCJAG00000018361	-	68	57.009	ENSCJAG00000016319	-	72	55.399
ENSCJAG00000018361	-	70	55.909	ENSCJAG00000023213	-	92	52.000
ENSCJAG00000018361	-	100	98.294	ENSCJAG00000009449	-	100	98.294
ENSCJAG00000018361	-	68	57.746	ENSCJAG00000003238	-	72	55.660

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000018361	-	100	96.117	ENSG00000125970	RALY	100	98.876	Homo_sapiens
ENSCJAG00000018361	-	69	74.528	ENSAPOG00000001026	raly	71	75.598	Acanthochromis_polyacanthus
ENSCJAG00000018361	-	100	85.113	ENSAMEG00000009050	RALY	100	83.230	Ailuropoda_melanoleuca
ENSCJAG00000018361	-	72	74.890	ENSACIG00000024288	raly	87	74.890	Amphilophus_citrinellus
ENSCJAG00000018361	-	68	75.598	ENSAOCG00000009883	raly	64	75.598	Amphiprion_ocellaris
ENSCJAG00000018361	-	68	76.077	ENSAPEG00000024106	raly	64	76.077	Amphiprion_percula
ENSCJAG00000018361	-	72	74.661	ENSATEG00000004870	raly	69	77.725	Anabas_testudineus
ENSCJAG00000018361	-	93	71.429	ENSAPLG00000012983	RALY	94	70.608	Anas_platyrhynchos
ENSCJAG00000018361	-	100	67.846	ENSACAG00000008983	RALY	88	67.524	Anolis_carolinensis
ENSCJAG00000018361	-	100	97.735	ENSANAG00000019376	RALY	100	97.735	Aotus_nancymaae
ENSCJAG00000018361	-	75	70.833	ENSACLG00000007561	raly	66	78.037	Astatotilapia_calliptera
ENSCJAG00000018361	-	100	86.007	ENSBTAG00000016524	RALY	100	86.348	Bos_taurus
ENSCJAG00000018361	-	100	86.731	ENSCAFG00000007490	RALY	100	86.408	Canis_familiaris
ENSCJAG00000018361	-	100	85.113	ENSCAFG00020005069	RALY	100	86.731	Canis_lupus_dingo
ENSCJAG00000018361	-	100	87.055	ENSCHIG00000026609	RALY	100	86.408	Capra_hircus
ENSCJAG00000018361	-	100	80.906	ENSTSYG00000002598	RALY	99	81.911	Carlito_syrichta
ENSCJAG00000018361	-	95	81.495	ENSCAPG00000008110	RALY	99	88.571	Cavia_aperea
ENSCJAG00000018361	-	100	87.898	ENSCPOG00000000309	RALY	99	94.762	Cavia_porcellus
ENSCJAG00000018361	-	100	98.058	ENSCCAG00000024548	RALY	100	98.058	Cebus_capucinus
ENSCJAG00000018361	-	100	97.756	ENSCATG00000031769	RALY	100	97.756	Cercocebus_atys
ENSCJAG00000018361	-	100	86.581	ENSCLAG00000016899	RALY	100	85.942	Chinchilla_lanigera
ENSCJAG00000018361	-	100	96.825	ENSCSAG00000012199	RALY	100	96.825	Chlorocebus_sabaeus
ENSCJAG00000018361	-	71	83.562	ENSCHOG00000000266	RALY	97	84.071	Choloepus_hoffmanni
ENSCJAG00000018361	-	100	68.065	ENSCPBG00000019164	RALY	100	69.257	Chrysemys_picta_bellii
ENSCJAG00000018361	-	100	97.087	ENSCANG00000037952	RALY	100	97.087	Colobus_angolensis_palliatus
ENSCJAG00000018361	-	100	85.762	ENSCGRG00001014652	Raly	100	85.430	Cricetulus_griseus_chok1gshd
ENSCJAG00000018361	-	100	85.762	ENSCGRG00000011726	Raly	100	85.430	Cricetulus_griseus_crigri
ENSCJAG00000018361	-	77	75.210	ENSDARG00000059972	raly	82	78.319	Danio_rerio
ENSCJAG00000018361	-	95	83.729	ENSDNOG00000003227	-	99	85.424	Dasypus_novemcinctus
ENSCJAG00000018361	-	100	83.618	ENSDNOG00000046782	-	100	85.324	Dasypus_novemcinctus
ENSCJAG00000018361	-	72	93.333	ENSDORG00000013400	Raly	99	93.333	Dipodomys_ordii
ENSCJAG00000018361	-	62	73.958	ENSETEG00000001919	-	63	73.958	Echinops_telfairi
ENSCJAG00000018361	-	71	80.365	ENSETEG00000012464	-	100	80.365	Echinops_telfairi
ENSCJAG00000018361	-	100	87.055	ENSEASG00005008501	RALY	100	86.731	Equus_asinus_asinus
ENSCJAG00000018361	-	100	87.379	ENSECAG00000012357	RALY	100	87.055	Equus_caballus
ENSCJAG00000018361	-	100	87.379	ENSECAG00000037642	-	100	87.055	Equus_caballus
ENSCJAG00000018361	-	100	87.379	ENSECAG00000030217	-	100	87.055	Equus_caballus
ENSCJAG00000018361	-	100	72.816	ENSEEUG00000005356	RALY	100	72.816	Erinaceus_europaeus
ENSCJAG00000018361	-	99	59.794	ENSELUG00000011138	raly	78	72.845	Esox_lucius
ENSCJAG00000018361	-	100	87.702	ENSFCAG00000025252	RALY	100	87.702	Felis_catus
ENSCJAG00000018361	-	100	86.755	ENSFDAG00000010175	RALY	100	97.647	Fukomys_damarensis
ENSCJAG00000018361	-	70	75.463	ENSFHEG00000018618	raly	82	75.463	Fundulus_heteroclitus
ENSCJAG00000018361	-	71	58.371	ENSGMOG00000012589	raly	99	58.371	Gadus_morhua
ENSCJAG00000018361	-	100	70.000	ENSGALG00000033696	RALY	99	71.380	Gallus_gallus
ENSCJAG00000018361	-	73	69.298	ENSGACG00000003636	raly	81	69.469	Gasterosteus_aculeatus
ENSCJAG00000018361	-	74	84.211	ENSGAGG00000016266	RALY	83	69.257	Gopherus_agassizii
ENSCJAG00000018361	-	100	95.793	ENSGGOG00000022709	RALY	100	95.793	Gorilla_gorilla
ENSCJAG00000018361	-	67	77.436	ENSHBUG00000021321	raly	66	77.436	Haplochromis_burtoni
ENSCJAG00000018361	-	100	79.863	ENSHGLG00000021175	-	100	79.863	Heterocephalus_glaber_female
ENSCJAG00000018361	-	100	87.302	ENSHGLG00000017779	-	99	93.810	Heterocephalus_glaber_female
ENSCJAG00000018361	-	100	87.619	ENSHGLG00100003933	RALY	100	97.163	Heterocephalus_glaber_male
ENSCJAG00000018361	-	100	69.625	ENSHGLG00100003829	-	100	70.307	Heterocephalus_glaber_male
ENSCJAG00000018361	-	100	64.164	ENSHGLG00100000278	-	100	64.505	Heterocephalus_glaber_male
ENSCJAG00000018361	-	72	54.911	ENSHCOG00000012268	raly	91	54.018	Hippocampus_comes
ENSCJAG00000018361	-	100	86.731	ENSSTOG00000008810	RALY	100	86.408	Ictidomys_tridecemlineatus
ENSCJAG00000018361	-	72	94.762	ENSJJAG00000008473	Raly	100	97.163	Jaculus_jaculus
ENSCJAG00000018361	-	70	73.171	ENSKMAG00000015656	raly	83	73.171	Kryptolebias_marmoratus
ENSCJAG00000018361	-	72	73.214	ENSLBEG00000022656	raly	85	74.107	Labrus_bergylta
ENSCJAG00000018361	-	72	79.821	ENSLACG00000008596	RALY	78	79.821	Latimeria_chalumnae
ENSCJAG00000018361	-	72	81.166	ENSLOCG00000007219	raly	79	82.063	Lepisosteus_oculatus
ENSCJAG00000018361	-	100	82.500	ENSLAFG00000000321	RALY	100	83.387	Loxodonta_africana
ENSCJAG00000018361	-	100	96.117	ENSMFAG00000033131	RALY	100	96.117	Macaca_fascicularis
ENSCJAG00000018361	-	100	96.764	ENSMMUG00000018093	RALY	100	96.764	Macaca_mulatta
ENSCJAG00000018361	-	100	96.440	ENSMNEG00000044988	RALY	100	96.440	Macaca_nemestrina
ENSCJAG00000018361	-	100	98.071	ENSMLEG00000028900	RALY	100	98.071	Mandrillus_leucophaeus
ENSCJAG00000018361	-	70	74.146	ENSMAMG00000012529	raly	62	75.122	Mastacembelus_armatus
ENSCJAG00000018361	-	67	76.923	ENSMZEG00005016550	raly	63	77.949	Maylandia_zebra
ENSCJAG00000018361	-	100	70.323	ENSMGAG00000002214	RALY	100	71.290	Meleagris_gallopavo
ENSCJAG00000018361	-	72	95.238	ENSMAUG00000005739	Raly	99	95.238	Mesocricetus_auratus
ENSCJAG00000018361	-	100	85.437	ENSMICG00000039074	RALY	100	86.084	Microcebus_murinus
ENSCJAG00000018361	-	100	86.424	ENSMOCG00000009450	Raly	100	86.755	Microtus_ochrogaster
ENSCJAG00000018361	-	72	74.222	ENSMMOG00000013788	raly	86	75.111	Mola_mola
ENSCJAG00000018361	-	100	60.692	ENSMODG00000002819	-	100	61.950	Monodelphis_domestica
ENSCJAG00000018361	-	68	76.636	ENSMALG00000007071	raly	55	76.636	Monopterus_albus
ENSCJAG00000018361	-	100	88.514	MGP_CAROLIEiJ_G0024519	Raly	100	96.454	Mus_caroli
ENSCJAG00000018361	-	100	88.514	ENSMUSG00000027593	Raly	100	96.454	Mus_musculus
ENSCJAG00000018361	-	100	87.542	MGP_PahariEiJ_G0025963	Raly	100	96.454	Mus_pahari
ENSCJAG00000018361	-	100	87.542	MGP_SPRETEiJ_G0025441	Raly	100	96.454	Mus_spretus
ENSCJAG00000018361	-	100	85.761	ENSMPUG00000017820	RALY	100	87.379	Mustela_putorius_furo
ENSCJAG00000018361	-	100	85.761	ENSMLUG00000005330	-	100	87.055	Myotis_lucifugus
ENSCJAG00000018361	-	100	78.641	ENSMLUG00000027895	-	98	78.317	Myotis_lucifugus
ENSCJAG00000018361	-	72	94.762	ENSNGAG00000001263	Raly	99	94.762	Nannospalax_galili
ENSCJAG00000018361	-	67	77.949	ENSNBRG00000014761	raly	66	77.949	Neolamprologus_brichardi
ENSCJAG00000018361	-	87	80.297	ENSNLEG00000010031	-	90	80.297	Nomascus_leucogenys
ENSCJAG00000018361	-	100	85.437	ENSOPRG00000008423	RALY	100	85.761	Ochotona_princeps
ENSCJAG00000018361	-	67	83.163	ENSODEG00000012831	-	99	83.163	Octodon_degus
ENSCJAG00000018361	-	91	69.549	ENSODEG00000011160	-	100	70.677	Octodon_degus
ENSCJAG00000018361	-	100	82.524	ENSODEG00000008369	-	100	82.026	Octodon_degus
ENSCJAG00000018361	-	75	70.833	ENSONIG00000004416	raly	74	78.037	Oreochromis_niloticus
ENSCJAG00000018361	-	100	86.164	ENSOCUG00000000477	RALY	86	86.478	Oryctolagus_cuniculus
ENSCJAG00000018361	-	100	80.769	ENSOGAG00000032337	RALY	100	79.808	Otolemur_garnettii
ENSCJAG00000018361	-	100	85.437	ENSOARG00000008957	RALY	100	86.084	Ovis_aries
ENSCJAG00000018361	-	100	96.440	ENSPPAG00000034951	RALY	100	96.440	Pan_paniscus
ENSCJAG00000018361	-	100	88.026	ENSPPRG00000014593	RALY	100	88.026	Panthera_pardus
ENSCJAG00000018361	-	100	88.026	ENSPTIG00000021910	RALY	100	88.026	Panthera_tigris_altaica
ENSCJAG00000018361	-	100	96.764	ENSPTRG00000013410	RALY	100	96.764	Pan_troglodytes
ENSCJAG00000018361	-	100	97.097	ENSPANG00000018093	RALY	100	97.097	Papio_anubis
ENSCJAG00000018361	-	70	79.263	ENSPKIG00000004894	raly	77	79.263	Paramormyrops_kingsleyae
ENSCJAG00000018361	-	74	73.640	ENSPSIG00000017714	RALY	96	61.564	Pelodiscus_sinensis
ENSCJAG00000018361	-	95	88.421	ENSPEMG00000021466	Raly	100	87.368	Peromyscus_maniculatus_bairdii
ENSCJAG00000018361	-	100	64.078	ENSPCIG00000011153	-	100	64.725	Phascolarctos_cinereus
ENSCJAG00000018361	-	100	96.440	ENSPPYG00000010932	RALY	100	96.440	Pongo_abelii
ENSCJAG00000018361	-	95	78.261	ENSPCAG00000016867	RALY	99	78.261	Procavia_capensis
ENSCJAG00000018361	-	100	84.142	ENSPCOG00000016363	RALY	100	84.790	Propithecus_coquereli
ENSCJAG00000018361	-	100	85.113	ENSPVAG00000015827	RALY	100	86.408	Pteropus_vampyrus
ENSCJAG00000018361	-	67	76.410	ENSPNYG00000011247	raly	63	77.436	Pundamilia_nyererei
ENSCJAG00000018361	-	72	78.027	ENSPNAG00000011812	raly	79	78.027	Pygocentrus_nattereri
ENSCJAG00000018361	-	100	88.814	ENSRNOG00000017405	Raly	100	89.492	Rattus_norvegicus
ENSCJAG00000018361	-	100	95.556	ENSRBIG00000030203	RALY	100	95.556	Rhinopithecus_bieti
ENSCJAG00000018361	-	100	95.556	ENSRROG00000038781	RALY	100	95.556	Rhinopithecus_roxellana
ENSCJAG00000018361	-	100	97.735	ENSSBOG00000001418	RALY	100	97.735	Saimiri_boliviensis_boliviensis
ENSCJAG00000018361	-	100	64.505	ENSSHAG00000016830	RALY	100	64.846	Sarcophilus_harrisii
ENSCJAG00000018361	-	70	78.899	ENSSFOG00015012304	raly	81	79.817	Scleropages_formosus
ENSCJAG00000018361	-	70	71.818	ENSSMAG00000001107	raly	72	74.419	Scophthalmus_maximus
ENSCJAG00000018361	-	73	71.739	ENSSDUG00000002411	raly	72	77.570	Seriola_dumerili
ENSCJAG00000018361	-	73	72.247	ENSSLDG00000017872	raly	70	78.199	Seriola_lalandi_dorsalis
ENSCJAG00000018361	-	100	64.078	ENSSARG00000002763	-	100	64.078	Sorex_araneus
ENSCJAG00000018361	-	93	70.035	ENSSPUG00000006251	RALY	84	86.697	Sphenodon_punctatus
ENSCJAG00000018361	-	57	78.286	ENSSPAG00000022480	-	76	74.359	Stegastes_partitus
ENSCJAG00000018361	-	100	85.321	ENSSSCG00000007275	RALY	100	85.321	Sus_scrofa
ENSCJAG00000018361	-	70	87.037	ENSTGUG00000003715	RALY	100	87.963	Taeniopygia_guttata
ENSCJAG00000018361	-	100	75.806	ENSTBEG00000009812	RALY	100	75.806	Tupaia_belangeri
ENSCJAG00000018361	-	100	84.516	ENSTTRG00000006590	RALY	100	84.839	Tursiops_truncatus
ENSCJAG00000018361	-	97	85.953	ENSUAMG00000006993	RALY	99	85.619	Ursus_americanus
ENSCJAG00000018361	-	100	85.113	ENSUMAG00000024106	RALY	100	86.731	Ursus_maritimus
ENSCJAG00000018361	-	73	86.792	ENSVPAG00000000373	RALY	76	86.792	Vicugna_pacos
ENSCJAG00000018361	-	100	85.113	ENSVVUG00000004546	RALY	100	86.731	Vulpes_vulpes
ENSCJAG00000018361	-	96	58.280	ENSXETG00000019514	raly	98	57.729	Xenopus_tropicalis