EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000018414 (Gene tree)
Gene ID: 100404231
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 12191 bases
Position: chrNTIC01000001.1:10979397-10991587
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000057693	MMR_HSR1	PF01926.23	7.5e-05	1	1
ENSCJAP00000034142	MMR_HSR1	PF01926.23	9.7e-05	1	1
ENSCJAP00000057101	MMR_HSR1	PF01926.23	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000077268	-	753	-	ENSCJAP00000057101	250 (aa)	-	A0A2R8P7J0
ENSCJAT00000076716	-	300	-	ENSCJAP00000059962	99 (aa)	-	A0A2R8N528
ENSCJAT00000036067	-	690	-	ENSCJAP00000034142	229 (aa)	-	F6X0U5
ENSCJAT00000086370	-	669	-	ENSCJAP00000057693	222 (aa)	-	A0A2R8MD18
ENSCJAT00000068194	-	498	-	ENSCJAP00000060840	165 (aa)	-	A0A2R8MJH9

Gene Model

Click here to download ENSCJAG00000018414's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000018414's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000018414	-	52	31.298	ENSCJAG00000010382	ARFRP1	71	36.364
ENSCJAG00000018414	-	72	34.682	ENSCJAG00000040200	RAB33B	73	34.682
ENSCJAG00000018414	-	71	35.294	ENSCJAG00000044464	RAB22A	86	35.294
ENSCJAG00000018414	-	74	34.463	ENSCJAG00000041773	RAB30	86	34.463
ENSCJAG00000018414	-	73	32.961	ENSCJAG00000003347	RAB9B	88	32.961
ENSCJAG00000018414	-	58	30.201	ENSCJAG00000007715	RAB25	70	30.201
ENSCJAG00000018414	-	58	32.667	ENSCJAG00000008981	RAB2B	69	32.667
ENSCJAG00000018414	-	67	31.013	ENSCJAG00000009933	-	78	31.013
ENSCJAG00000018414	-	54	30.000	ENSCJAG00000010247	RAB23	51	30.000
ENSCJAG00000018414	-	65	36.538	ENSCJAG00000046275	RAB1A	77	36.538
ENSCJAG00000018414	-	63	30.464	ENSCJAG00000044294	MRAS	77	31.481
ENSCJAG00000018414	-	51	39.130	ENSCJAG00000041780	RAB5B	52	38.983
ENSCJAG00000018414	-	68	38.272	ENSCJAG00000001599	-	79	38.272
ENSCJAG00000018414	-	67	36.306	ENSCJAG00000010778	RAB11B	88	36.306
ENSCJAG00000018414	-	67	31.875	ENSCJAG00000047802	RAB39B	75	31.875
ENSCJAG00000018414	-	65	30.128	ENSCJAG00000013101	RAB34	60	30.128
ENSCJAG00000018414	-	65	35.294	ENSCJAG00000048394	RAB5A	71	35.294
ENSCJAG00000018414	-	69	34.337	ENSCJAG00000017521	RAB7A	83	33.742
ENSCJAG00000018414	-	63	37.584	ENSCJAG00000045749	RAB18	72	38.255
ENSCJAG00000018414	-	76	35.955	ENSCJAG00000042020	RAB14	81	35.955
ENSCJAG00000018414	-	52	30.075	ENSCJAG00000008611	RABL3	60	30.075
ENSCJAG00000018414	-	74	30.814	ENSCJAG00000008955	RAB35	86	30.814
ENSCJAG00000018414	-	58	30.872	ENSCJAG00000039039	RAB6A	72	30.872
ENSCJAG00000018414	-	75	33.696	ENSCJAG00000003973	RAB9A	88	33.696
ENSCJAG00000018414	-	68	37.037	ENSCJAG00000002524	RAB33A	67	37.267
ENSCJAG00000018414	-	65	37.255	ENSCJAG00000042037	RAB11A	71	37.255
ENSCJAG00000018414	-	63	30.201	ENSCJAG00000019696	RAB15	83	33.333
ENSCJAG00000018414	-	65	38.065	ENSCJAG00000047933	-	76	38.065

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000018414	-	100	95.197	ENSG00000079974	RABL2B	100	95.197	Homo_sapiens
ENSCJAG00000018414	-	100	94.760	ENSG00000144134	RABL2A	100	95.833	Homo_sapiens
ENSCJAG00000018414	-	96	73.182	ENSAPOG00000023708	rabl2	99	73.182	Acanthochromis_polyacanthus
ENSCJAG00000018414	-	97	87.111	ENSAMEG00000003173	-	99	87.111	Ailuropoda_melanoleuca
ENSCJAG00000018414	-	85	76.923	ENSACIG00000000670	rabl2	88	76.923	Amphilophus_citrinellus
ENSCJAG00000018414	-	96	73.636	ENSAOCG00000008069	rabl2	99	73.636	Amphiprion_ocellaris
ENSCJAG00000018414	-	96	72.727	ENSAPEG00000003164	rabl2	99	72.727	Amphiprion_percula
ENSCJAG00000018414	-	96	73.636	ENSATEG00000001111	rabl2	99	73.636	Anabas_testudineus
ENSCJAG00000018414	-	72	85.366	ENSACAG00000000418	-	92	86.420	Anolis_carolinensis
ENSCJAG00000018414	-	100	95.197	ENSANAG00000021001	-	100	95.197	Aotus_nancymaae
ENSCJAG00000018414	-	86	79.592	ENSACLG00000025632	rabl2	88	79.592	Astatotilapia_calliptera
ENSCJAG00000018414	-	93	77.934	ENSAMXG00000040611	rabl2	96	77.934	Astyanax_mexicanus
ENSCJAG00000018414	-	97	83.482	ENSBTAG00000004876	RABL2B	99	83.929	Bos_taurus
ENSCJAG00000018414	-	97	90.950	ENSCAFG00020006938	-	99	90.950	Canis_lupus_dingo
ENSCJAG00000018414	-	97	82.533	ENSCHIG00000000591	-	99	82.969	Capra_hircus
ENSCJAG00000018414	-	100	86.900	ENSTSYG00000004323	-	100	86.900	Carlito_syrichta
ENSCJAG00000018414	-	95	90.323	ENSCPOG00000026899	-	98	90.323	Cavia_porcellus
ENSCJAG00000018414	-	100	96.507	ENSCCAG00000025944	-	100	96.507	Cebus_capucinus
ENSCJAG00000018414	-	100	93.450	ENSCATG00000034307	-	100	93.450	Cercocebus_atys
ENSCJAG00000018414	-	97	89.140	ENSCLAG00000017218	-	99	89.140	Chinchilla_lanigera
ENSCJAG00000018414	-	100	93.074	ENSCSAG00000004698	-	100	93.074	Chlorocebus_sabaeus
ENSCJAG00000018414	-	96	79.091	ENSCPBG00000011715	-	98	79.091	Chrysemys_picta_bellii
ENSCJAG00000018414	-	82	65.426	ENSCING00000004961	-	87	65.426	Ciona_intestinalis
ENSCJAG00000018414	-	78	67.978	ENSCSAVG00000006042	-	86	67.978	Ciona_savignyi
ENSCJAG00000018414	-	100	91.703	ENSCANG00000030879	-	100	91.703	Colobus_angolensis_palliatus
ENSCJAG00000018414	-	97	87.783	ENSCGRG00001021894	Rabl2	99	87.783	Cricetulus_griseus_chok1gshd
ENSCJAG00000018414	-	85	77.320	ENSCSEG00000005479	rabl2	93	75.481	Cynoglossus_semilaevis
ENSCJAG00000018414	-	89	75.862	ENSCVAG00000011432	rabl2	93	75.862	Cyprinodon_variegatus
ENSCJAG00000018414	-	93	75.117	ENSDARG00000063321	rabl2	96	75.117	Danio_rerio
ENSCJAG00000018414	-	97	90.045	ENSDNOG00000035151	-	99	90.045	Dasypus_novemcinctus
ENSCJAG00000018414	-	97	89.593	ENSDORG00000000003	Rabl2	99	89.593	Dipodomys_ordii
ENSCJAG00000018414	-	97	87.783	ENSEASG00005008239	-	99	87.783	Equus_asinus_asinus
ENSCJAG00000018414	-	97	87.330	ENSECAG00000026942	-	99	87.330	Equus_caballus
ENSCJAG00000018414	-	97	89.593	ENSFCAG00000033642	-	99	89.593	Felis_catus
ENSCJAG00000018414	-	96	87.727	ENSFDAG00000002113	-	99	87.727	Fukomys_damarensis
ENSCJAG00000018414	-	99	70.485	ENSFHEG00000015015	rabl2	85	70.485	Fundulus_heteroclitus
ENSCJAG00000018414	-	86	75.127	ENSGMOG00000018928	rabl2	100	75.127	Gadus_morhua
ENSCJAG00000018414	-	96	76.364	ENSGALG00000032458	RABL2B	99	76.364	Gallus_gallus
ENSCJAG00000018414	-	88	75.622	ENSGAFG00000005188	rabl2	95	74.408	Gambusia_affinis
ENSCJAG00000018414	-	96	72.727	ENSGACG00000012474	rabl2	99	72.727	Gasterosteus_aculeatus
ENSCJAG00000018414	-	86	79.592	ENSHBUG00000010964	rabl2	88	79.592	Haplochromis_burtoni
ENSCJAG00000018414	-	97	88.688	ENSHGLG00000005750	-	99	88.688	Heterocephalus_glaber_female
ENSCJAG00000018414	-	97	88.688	ENSHGLG00100016281	-	99	88.688	Heterocephalus_glaber_male
ENSCJAG00000018414	-	97	91.855	ENSSTOG00000002723	-	99	91.855	Ictidomys_tridecemlineatus
ENSCJAG00000018414	-	97	87.783	ENSJJAG00000010792	Rabl2	99	87.783	Jaculus_jaculus
ENSCJAG00000018414	-	96	73.636	ENSKMAG00000012723	rabl2	99	73.636	Kryptolebias_marmoratus
ENSCJAG00000018414	-	96	74.429	ENSLBEG00000003644	rabl2	98	74.429	Labrus_bergylta
ENSCJAG00000018414	-	93	79.717	ENSLACG00000003722	rabl2	94	79.717	Latimeria_chalumnae
ENSCJAG00000018414	-	95	77.880	ENSLOCG00000016767	rabl2	96	77.880	Lepisosteus_oculatus
ENSCJAG00000018414	-	100	93.886	ENSMFAG00000044775	-	100	93.886	Macaca_fascicularis
ENSCJAG00000018414	-	100	93.886	ENSMMUG00000022914	RABL2B	100	93.886	Macaca_mulatta
ENSCJAG00000018414	-	100	93.013	ENSMNEG00000028460	-	100	93.013	Macaca_nemestrina
ENSCJAG00000018414	-	100	93.450	ENSMLEG00000032621	-	100	93.450	Mandrillus_leucophaeus
ENSCJAG00000018414	-	96	72.273	ENSMAMG00000008168	rabl2	99	72.273	Mastacembelus_armatus
ENSCJAG00000018414	-	86	77.665	ENSMZEG00005019758	rabl2	91	77.665	Maylandia_zebra
ENSCJAG00000018414	-	97	86.878	ENSMAUG00000010955	Rabl2	99	86.878	Mesocricetus_auratus
ENSCJAG00000018414	-	100	91.266	ENSMICG00000031301	-	100	91.266	Microcebus_murinus
ENSCJAG00000018414	-	97	85.973	ENSMOCG00000002775	Rabl2	99	85.973	Microtus_ochrogaster
ENSCJAG00000018414	-	94	85.253	ENSMODG00000010838	-	99	85.253	Monodelphis_domestica
ENSCJAG00000018414	-	92	74.882	ENSMALG00000005944	rabl2	95	74.882	Monopterus_albus
ENSCJAG00000018414	-	97	84.163	MGP_CAROLIEiJ_G0020176	Rabl2	98	84.163	Mus_caroli
ENSCJAG00000018414	-	97	83.258	ENSMUSG00000022621	Rabl2	99	83.258	Mus_musculus
ENSCJAG00000018414	-	97	84.163	MGP_PahariEiJ_G0020181	Rabl2	99	84.163	Mus_pahari
ENSCJAG00000018414	-	97	83.258	MGP_SPRETEiJ_G0021073	Rabl2	99	83.258	Mus_spretus
ENSCJAG00000018414	-	97	89.593	ENSMPUG00000001806	-	99	89.593	Mustela_putorius_furo
ENSCJAG00000018414	-	99	83.478	ENSNGAG00000012843	Rabl2	99	83.478	Nannospalax_galili
ENSCJAG00000018414	-	86	79.592	ENSNBRG00000000489	rabl2	88	79.592	Neolamprologus_brichardi
ENSCJAG00000018414	-	100	93.450	ENSNLEG00000030435	-	100	93.450	Nomascus_leucogenys
ENSCJAG00000018414	-	95	88.991	ENSODEG00000015650	-	98	88.991	Octodon_degus
ENSCJAG00000018414	-	96	72.523	ENSONIG00000014885	rabl2	96	72.523	Oreochromis_niloticus
ENSCJAG00000018414	-	87	75.377	ENSORLG00000009874	rabl2	88	75.377	Oryzias_latipes
ENSCJAG00000018414	-	87	75.377	ENSORLG00020001721	rabl2	88	75.377	Oryzias_latipes_hni
ENSCJAG00000018414	-	87	75.377	ENSORLG00015014268	rabl2	88	75.377	Oryzias_latipes_hsok
ENSCJAG00000018414	-	91	74.038	ENSOMEG00000008576	rabl2	96	74.038	Oryzias_melastigma
ENSCJAG00000018414	-	100	89.956	ENSOGAG00000009123	-	100	89.956	Otolemur_garnettii
ENSCJAG00000018414	-	100	85.714	ENSPPRG00000014642	-	100	85.714	Panthera_pardus
ENSCJAG00000018414	-	97	89.593	ENSPTIG00000018747	-	99	89.593	Panthera_tigris_altaica
ENSCJAG00000018414	-	100	89.540	ENSPTRG00000014555	-	100	89.540	Pan_troglodytes
ENSCJAG00000018414	-	100	88.703	ENSPANG00000036121	-	100	88.703	Papio_anubis
ENSCJAG00000018414	-	86	82.653	ENSPKIG00000025372	rabl2	88	82.653	Paramormyrops_kingsleyae
ENSCJAG00000018414	-	92	82.938	ENSPSIG00000014041	-	93	82.938	Pelodiscus_sinensis
ENSCJAG00000018414	-	85	78.462	ENSPMGG00000012946	rabl2	94	78.462	Periophthalmus_magnuspinnatus
ENSCJAG00000018414	-	97	85.520	ENSPEMG00000024045	Rabl2	99	85.520	Peromyscus_maniculatus_bairdii
ENSCJAG00000018414	-	96	84.018	ENSPCIG00000012436	-	92	82.222	Phascolarctos_cinereus
ENSCJAG00000018414	-	91	75.355	ENSPFOG00000017960	rabl2	95	75.355	Poecilia_formosa
ENSCJAG00000018414	-	91	76.077	ENSPLAG00000015685	rabl2	95	76.077	Poecilia_latipinna
ENSCJAG00000018414	-	91	76.077	ENSPMEG00000004703	rabl2	95	76.077	Poecilia_mexicana
ENSCJAG00000018414	-	86	76.142	ENSPREG00000014761	rabl2	94	78.307	Poecilia_reticulata
ENSCJAG00000018414	-	100	93.886	ENSPPYG00000012000	-	100	93.886	Pongo_abelii
ENSCJAG00000018414	-	100	91.703	ENSPCOG00000024865	-	100	91.703	Propithecus_coquereli
ENSCJAG00000018414	-	99	82.353	ENSPVAG00000004539	-	100	82.353	Pteropus_vampyrus
ENSCJAG00000018414	-	86	79.592	ENSPNYG00000004845	rabl2	88	79.592	Pundamilia_nyererei
ENSCJAG00000018414	-	88	80.100	ENSPNAG00000024254	rabl2	100	75.893	Pygocentrus_nattereri
ENSCJAG00000018414	-	97	85.520	ENSRNOG00000013947	Rabl2	88	85.520	Rattus_norvegicus
ENSCJAG00000018414	-	100	91.703	ENSRBIG00000033607	-	100	91.703	Rhinopithecus_bieti
ENSCJAG00000018414	-	100	93.450	ENSRROG00000031130	-	100	93.450	Rhinopithecus_roxellana
ENSCJAG00000018414	-	100	96.507	ENSSBOG00000033266	-	100	96.507	Saimiri_boliviensis_boliviensis
ENSCJAG00000018414	-	89	77.941	ENSSFOG00015020738	rabl2	94	77.033	Scleropages_formosus
ENSCJAG00000018414	-	91	76.442	ENSSMAG00000004606	rabl2	93	76.442	Scophthalmus_maximus
ENSCJAG00000018414	-	92	75.355	ENSSDUG00000014765	rabl2	95	75.355	Seriola_dumerili
ENSCJAG00000018414	-	74	90.000	ENSSSCG00000025041	-	100	90.000	Sus_scrofa
ENSCJAG00000018414	-	89	75.980	ENSTGUG00000016028	-	98	75.980	Taeniopygia_guttata
ENSCJAG00000018414	-	96	72.727	ENSTRUG00000012454	rabl2	99	72.727	Takifugu_rubripes
ENSCJAG00000018414	-	96	72.273	ENSTNIG00000017951	rabl2	99	72.273	Tetraodon_nigroviridis
ENSCJAG00000018414	-	88	89.604	ENSUAMG00000015761	-	90	89.604	Ursus_americanus
ENSCJAG00000018414	-	97	89.593	ENSUMAG00000017116	-	99	89.593	Ursus_maritimus
ENSCJAG00000018414	-	97	90.045	ENSVVUG00000025761	-	99	90.045	Vulpes_vulpes
ENSCJAG00000018414	-	94	77.778	ENSXETG00000015712	rabl2b	96	77.778	Xenopus_tropicalis
ENSCJAG00000018414	-	92	75.355	ENSXMAG00000004569	rabl2	95	75.355	Xiphophorus_maculatus