EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000018434 (Gene tree)
Gene ID: -
Gene Symbol: LARP4B
Alias: KIAA0217|LARP5
Full Name: La ribonucleoprotein domain family member 4B
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 103929 bases
Position: chrNTIC01036611.1:143957241-144061169
Accession: 28987
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000064720	La	PF05383.17	3.4e-14	1	1
ENSCJAP00000034178	La	PF05383.17	3.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000073885	LARP4B-201	2695	-	ENSCJAP00000064720	736 (aa)	-	U3EWV7
ENSCJAT00000036106	LARP4B-202	2193	-	ENSCJAP00000034178	730 (aa)	-	H9KXD6

Gene Model

Click here to download ENSCJAG00000018434's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000018434's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000018434	LARP4B	85	50.929	ENSCJAG00000021131	LARP4	99	50.929

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000018434	LARP4B	100	95.393	ENSG00000107929	LARP4B	100	98.246	Homo_sapiens
ENSCJAG00000018434	LARP4B	100	55.336	ENSAPOG00000020531	LARP4B	100	55.921	Acanthochromis_polyacanthus
ENSCJAG00000018434	LARP4B	100	84.168	ENSAMEG00000001810	LARP4B	100	84.168	Ailuropoda_melanoleuca
ENSCJAG00000018434	LARP4B	87	56.728	ENSAOCG00000007887	-	78	86.667	Amphiprion_ocellaris
ENSCJAG00000018434	LARP4B	96	58.035	ENSAPEG00000002512	LARP4B	98	57.289	Amphiprion_percula
ENSCJAG00000018434	LARP4B	100	55.000	ENSATEG00000012614	LARP4B	100	55.736	Anabas_testudineus
ENSCJAG00000018434	LARP4B	100	72.933	ENSAPLG00000003813	LARP4B	98	72.933	Anas_platyrhynchos
ENSCJAG00000018434	LARP4B	100	71.562	ENSACAG00000002858	LARP4B	100	71.562	Anolis_carolinensis
ENSCJAG00000018434	LARP4B	100	97.962	ENSANAG00000007531	-	100	97.962	Aotus_nancymaae
ENSCJAG00000018434	LARP4B	100	56.250	ENSACLG00000026356	LARP4B	100	57.179	Astatotilapia_calliptera
ENSCJAG00000018434	LARP4B	96	51.220	ENSAMXG00000003335	larp4b	97	51.084	Astyanax_mexicanus
ENSCJAG00000018434	LARP4B	100	80.702	ENSBTAG00000013899	LARP4B	100	80.702	Bos_taurus
ENSCJAG00000018434	LARP4B	100	84.844	ENSCAFG00020004209	LARP4B	100	84.844	Canis_lupus_dingo
ENSCJAG00000018434	LARP4B	100	80.888	ENSCHIG00000013543	LARP4B	100	80.888	Capra_hircus
ENSCJAG00000018434	LARP4B	81	93.434	ENSTSYG00000002568	LARP4B	100	93.434	Carlito_syrichta
ENSCJAG00000018434	LARP4B	96	77.215	ENSCAPG00000009725	LARP4B	97	76.934	Cavia_aperea
ENSCJAG00000018434	LARP4B	100	87.263	ENSCPOG00000009375	LARP4B	100	87.263	Cavia_porcellus
ENSCJAG00000018434	LARP4B	100	98.098	ENSCCAG00000024869	LARP4B	100	98.098	Cebus_capucinus
ENSCJAG00000018434	LARP4B	100	96.206	ENSCATG00000019750	LARP4B	100	96.206	Cercocebus_atys
ENSCJAG00000018434	LARP4B	100	86.874	ENSCLAG00000011570	LARP4B	100	86.874	Chinchilla_lanigera
ENSCJAG00000018434	LARP4B	66	88.710	ENSCHOG00000007831	-	66	88.710	Choloepus_hoffmanni
ENSCJAG00000018434	LARP4B	100	72.897	ENSCPBG00000017063	LARP4B	100	72.897	Chrysemys_picta_bellii
ENSCJAG00000018434	LARP4B	100	94.809	ENSCANG00000038021	LARP4B	100	94.809	Colobus_angolensis_palliatus
ENSCJAG00000018434	LARP4B	100	87.432	ENSCGRG00001022930	Larp4b	100	89.455	Cricetulus_griseus_chok1gshd
ENSCJAG00000018434	LARP4B	100	87.432	ENSCGRG00000006022	Larp4b	100	89.455	Cricetulus_griseus_crigri
ENSCJAG00000018434	LARP4B	100	54.090	ENSCSEG00000007342	LARP4B	100	54.222	Cynoglossus_semilaevis
ENSCJAG00000018434	LARP4B	100	55.194	ENSCVAG00000008910	LARP4B	100	56.070	Cyprinodon_variegatus
ENSCJAG00000018434	LARP4B	94	49.725	ENSDARG00000062146	larp4b	94	50.617	Danio_rerio
ENSCJAG00000018434	LARP4B	93	84.370	ENSDNOG00000045543	-	100	86.694	Dasypus_novemcinctus
ENSCJAG00000018434	LARP4B	100	85.948	ENSDORG00000009328	Larp4b	100	85.948	Dipodomys_ordii
ENSCJAG00000018434	LARP4B	85	82.069	ENSETEG00000011249	LARP4B	91	82.069	Echinops_telfairi
ENSCJAG00000018434	LARP4B	100	83.356	ENSEASG00005019068	-	100	83.356	Equus_asinus_asinus
ENSCJAG00000018434	LARP4B	100	83.627	ENSECAG00000024040	LARP4B	100	83.627	Equus_caballus
ENSCJAG00000018434	LARP4B	100	81.402	ENSEEUG00000008391	LARP4B	98	81.402	Erinaceus_europaeus
ENSCJAG00000018434	LARP4B	89	38.996	ENSELUG00000001417	-	94	38.667	Esox_lucius
ENSCJAG00000018434	LARP4B	100	54.795	ENSELUG00000008626	LARP4B	100	55.348	Esox_lucius
ENSCJAG00000018434	LARP4B	100	84.076	ENSFCAG00000000721	-	100	84.076	Felis_catus
ENSCJAG00000018434	LARP4B	100	72.630	ENSFALG00000006961	LARP4B	100	72.630	Ficedula_albicollis
ENSCJAG00000018434	LARP4B	100	87.415	ENSFDAG00000006158	LARP4B	97	87.415	Fukomys_damarensis
ENSCJAG00000018434	LARP4B	100	50.708	ENSFHEG00000013037	LARP4B	65	90.756	Fundulus_heteroclitus
ENSCJAG00000018434	LARP4B	76	64.268	ENSGMOG00000010818	-	89	63.861	Gadus_morhua
ENSCJAG00000018434	LARP4B	100	72.606	ENSGALG00000006672	LARP4B	100	72.606	Gallus_gallus
ENSCJAG00000018434	LARP4B	100	58.679	ENSGACG00000017535	LARP4B	98	58.938	Gasterosteus_aculeatus
ENSCJAG00000018434	LARP4B	91	74.524	ENSGAGG00000008598	LARP4B	100	74.524	Gopherus_agassizii
ENSCJAG00000018434	LARP4B	100	95.393	ENSGGOG00000003572	LARP4B	100	95.393	Gorilla_gorilla
ENSCJAG00000018434	LARP4B	100	55.556	ENSHBUG00000007535	LARP4B	100	56.554	Haplochromis_burtoni
ENSCJAG00000018434	LARP4B	100	88.259	ENSHGLG00000012936	LARP4B	100	88.259	Heterocephalus_glaber_female
ENSCJAG00000018434	LARP4B	100	88.363	ENSHGLG00100016220	-	100	88.363	Heterocephalus_glaber_male
ENSCJAG00000018434	LARP4B	88	73.190	ENSHGLG00100017261	-	100	73.190	Heterocephalus_glaber_male
ENSCJAG00000018434	LARP4B	99	54.915	ENSHCOG00000011581	LARP4B	89	55.177	Hippocampus_comes
ENSCJAG00000018434	LARP4B	92	50.640	ENSIPUG00000009705	larp4b	97	49.658	Ictalurus_punctatus
ENSCJAG00000018434	LARP4B	100	85.270	ENSSTOG00000000587	LARP4B	100	85.270	Ictidomys_tridecemlineatus
ENSCJAG00000018434	LARP4B	100	88.618	ENSJJAG00000020847	Larp4b	100	88.618	Jaculus_jaculus
ENSCJAG00000018434	LARP4B	100	55.890	ENSKMAG00000021674	LARP4B	100	56.875	Kryptolebias_marmoratus
ENSCJAG00000018434	LARP4B	77	62.167	ENSLBEG00000025293	-	79	62.437	Labrus_bergylta
ENSCJAG00000018434	LARP4B	91	65.262	ENSLACG00000009492	LARP4B	100	65.262	Latimeria_chalumnae
ENSCJAG00000018434	LARP4B	100	64.482	ENSLOCG00000012290	larp4b	100	65.512	Lepisosteus_oculatus
ENSCJAG00000018434	LARP4B	100	84.253	ENSLAFG00000015334	LARP4B	100	84.253	Loxodonta_africana
ENSCJAG00000018434	LARP4B	100	96.206	ENSMFAG00000001766	LARP4B	100	94.809	Macaca_fascicularis
ENSCJAG00000018434	LARP4B	100	96.206	ENSMMUG00000005279	LARP4B	100	96.206	Macaca_mulatta
ENSCJAG00000018434	LARP4B	100	96.070	ENSMNEG00000014019	LARP4B	100	94.142	Macaca_nemestrina
ENSCJAG00000018434	LARP4B	100	95.805	ENSMLEG00000035198	LARP4B	100	95.805	Mandrillus_leucophaeus
ENSCJAG00000018434	LARP4B	100	54.795	ENSMAMG00000013742	LARP4B	100	55.168	Mastacembelus_armatus
ENSCJAG00000018434	LARP4B	89	57.343	ENSMZEG00005014594	-	97	58.799	Maylandia_zebra
ENSCJAG00000018434	LARP4B	81	62.963	ENSMZEG00005006498	-	91	63.514	Maylandia_zebra
ENSCJAG00000018434	LARP4B	100	72.230	ENSMGAG00000005472	LARP4B	100	72.230	Meleagris_gallopavo
ENSCJAG00000018434	LARP4B	100	87.314	ENSMAUG00000021657	Larp4b	100	90.158	Mesocricetus_auratus
ENSCJAG00000018434	LARP4B	100	82.114	ENSMICG00000001301	LARP4B	100	82.114	Microcebus_murinus
ENSCJAG00000018434	LARP4B	100	85.263	ENSMOCG00000021452	Larp4b	100	85.263	Microtus_ochrogaster
ENSCJAG00000018434	LARP4B	81	62.561	ENSMMOG00000011253	-	89	62.885	Mola_mola
ENSCJAG00000018434	LARP4B	100	71.825	ENSMODG00000005957	LARP4B	100	71.825	Monodelphis_domestica
ENSCJAG00000018434	LARP4B	100	48.541	ENSMALG00000012432	LARP4B	100	49.667	Monopterus_albus
ENSCJAG00000018434	LARP4B	100	86.468	MGP_CAROLIEiJ_G0018216	Larp4b	100	86.604	Mus_caroli
ENSCJAG00000018434	LARP4B	100	86.235	ENSMUSG00000033499	Larp4b	100	86.370	Mus_musculus
ENSCJAG00000018434	LARP4B	100	86.739	MGP_PahariEiJ_G0019266	Larp4b	100	86.739	Mus_pahari
ENSCJAG00000018434	LARP4B	100	86.100	MGP_SPRETEiJ_G0019074	Larp4b	100	86.235	Mus_spretus
ENSCJAG00000018434	LARP4B	100	83.897	ENSMPUG00000016220	LARP4B	97	83.897	Mustela_putorius_furo
ENSCJAG00000018434	LARP4B	94	80.925	ENSMLUG00000005880	LARP4B	100	80.925	Myotis_lucifugus
ENSCJAG00000018434	LARP4B	100	86.856	ENSNGAG00000001750	Larp4b	100	86.856	Nannospalax_galili
ENSCJAG00000018434	LARP4B	81	56.078	ENSNBRG00000020018	LARP4B	88	56.240	Neolamprologus_brichardi
ENSCJAG00000018434	LARP4B	100	95.393	ENSNLEG00000013442	LARP4B	100	95.393	Nomascus_leucogenys
ENSCJAG00000018434	LARP4B	84	69.565	ENSMEUG00000013114	-	83	69.565	Notamacropus_eugenii
ENSCJAG00000018434	LARP4B	100	84.832	ENSOPRG00000003300	LARP4B	100	84.832	Ochotona_princeps
ENSCJAG00000018434	LARP4B	100	83.158	ENSODEG00000001109	LARP4B	100	83.158	Octodon_degus
ENSCJAG00000018434	LARP4B	100	58.077	ENSONIG00000017705	LARP4B	100	58.718	Oreochromis_niloticus
ENSCJAG00000018434	LARP4B	100	71.693	ENSOANG00000006100	LARP4B	100	71.825	Ornithorhynchus_anatinus
ENSCJAG00000018434	LARP4B	100	86.071	ENSOCUG00000004950	LARP4B	97	86.071	Oryctolagus_cuniculus
ENSCJAG00000018434	LARP4B	100	54.648	ENSORLG00000006080	LARP4B	100	54.899	Oryzias_latipes
ENSCJAG00000018434	LARP4B	100	54.130	ENSORLG00020020940	LARP4B	100	54.257	Oryzias_latipes_hni
ENSCJAG00000018434	LARP4B	100	54.271	ENSORLG00015020608	LARP4B	100	54.397	Oryzias_latipes_hsok
ENSCJAG00000018434	LARP4B	100	52.823	ENSOMEG00000019619	LARP4B	100	53.450	Oryzias_melastigma
ENSCJAG00000018434	LARP4B	94	83.838	ENSOGAG00000011540	LARP4B	100	83.838	Otolemur_garnettii
ENSCJAG00000018434	LARP4B	100	80.831	ENSOARG00000015320	LARP4B	98	80.831	Ovis_aries
ENSCJAG00000018434	LARP4B	100	95.257	ENSPPAG00000039232	LARP4B	100	95.257	Pan_paniscus
ENSCJAG00000018434	LARP4B	100	84.168	ENSPPRG00000009489	LARP4B	100	84.168	Panthera_pardus
ENSCJAG00000018434	LARP4B	100	84.168	ENSPTIG00000008543	LARP4B	100	84.168	Panthera_tigris_altaica
ENSCJAG00000018434	LARP4B	100	95.257	ENSPTRG00000002235	LARP4B	100	95.257	Pan_troglodytes
ENSCJAG00000018434	LARP4B	100	96.206	ENSPANG00000023546	LARP4B	100	94.278	Papio_anubis
ENSCJAG00000018434	LARP4B	99	55.570	ENSPKIG00000012368	LARP4B	99	55.440	Paramormyrops_kingsleyae
ENSCJAG00000018434	LARP4B	76	84.127	ENSPSIG00000005600	LARP4B	99	84.127	Pelodiscus_sinensis
ENSCJAG00000018434	LARP4B	97	52.174	ENSPMGG00000008261	LARP4B	91	52.174	Periophthalmus_magnuspinnatus
ENSCJAG00000018434	LARP4B	100	87.669	ENSPEMG00000014052	Larp4b	100	87.669	Peromyscus_maniculatus_bairdii
ENSCJAG00000018434	LARP4B	100	54.410	ENSPFOG00000000029	LARP4B	100	55.404	Poecilia_formosa
ENSCJAG00000018434	LARP4B	100	54.759	ENSPLAG00000002871	LARP4B	100	55.417	Poecilia_latipinna
ENSCJAG00000018434	LARP4B	100	54.342	ENSPMEG00000016361	LARP4B	100	55.335	Poecilia_mexicana
ENSCJAG00000018434	LARP4B	100	95.264	ENSPPYG00000002035	LARP4B	97	95.264	Pongo_abelii
ENSCJAG00000018434	LARP4B	100	86.179	ENSPCOG00000014688	LARP4B	100	86.179	Propithecus_coquereli
ENSCJAG00000018434	LARP4B	85	88.571	ENSPVAG00000009784	LARP4B	88	88.571	Pteropus_vampyrus
ENSCJAG00000018434	LARP4B	100	55.808	ENSPNYG00000024252	LARP4B	100	56.929	Pundamilia_nyererei
ENSCJAG00000018434	LARP4B	94	51.393	ENSPNAG00000028956	larp4b	95	51.253	Pygocentrus_nattereri
ENSCJAG00000018434	LARP4B	99	87.805	ENSRNOG00000015888	Larp4b	100	87.940	Rattus_norvegicus
ENSCJAG00000018434	LARP4B	100	95.393	ENSRBIG00000033294	LARP4B	100	95.799	Rhinopithecus_bieti
ENSCJAG00000018434	LARP4B	100	94.986	ENSRROG00000033879	LARP4B	100	95.393	Rhinopithecus_roxellana
ENSCJAG00000018434	LARP4B	100	92.391	ENSSBOG00000021109	LARP4B	100	92.391	Saimiri_boliviensis_boliviensis
ENSCJAG00000018434	LARP4B	100	74.599	ENSSHAG00000013392	LARP4B	100	74.599	Sarcophilus_harrisii
ENSCJAG00000018434	LARP4B	96	56.604	ENSSFOG00015003256	LARP4B	90	57.584	Scleropages_formosus
ENSCJAG00000018434	LARP4B	82	75.862	ENSSMAG00000005982	-	99	75.862	Scophthalmus_maximus
ENSCJAG00000018434	LARP4B	100	56.095	ENSSDUG00000006704	LARP4B	100	57.196	Seriola_dumerili
ENSCJAG00000018434	LARP4B	81	63.434	ENSSLDG00000020660	LARP4B	91	63.275	Seriola_lalandi_dorsalis
ENSCJAG00000018434	LARP4B	64	99.057	ENSSARG00000001243	-	79	99.057	Sorex_araneus
ENSCJAG00000018434	LARP4B	89	77.929	ENSSPUG00000013734	-	99	77.929	Sphenodon_punctatus
ENSCJAG00000018434	LARP4B	100	71.120	ENSSPUG00000002102	-	100	71.120	Sphenodon_punctatus
ENSCJAG00000018434	LARP4B	86	74.194	ENSSPAG00000014628	LARP4B	93	74.194	Stegastes_partitus
ENSCJAG00000018434	LARP4B	100	80.785	ENSSSCG00000011162	LARP4B	100	83.388	Sus_scrofa
ENSCJAG00000018434	LARP4B	100	73.190	ENSTGUG00000000811	-	100	73.190	Taeniopygia_guttata
ENSCJAG00000018434	LARP4B	99	55.829	ENSTNIG00000007991	LARP4B	99	55.769	Tetraodon_nigroviridis
ENSCJAG00000018434	LARP4B	100	56.809	ENSTNIG00000004571	-	98	57.458	Tetraodon_nigroviridis
ENSCJAG00000018434	LARP4B	90	87.149	ENSTTRG00000011151	LARP4B	90	87.149	Tursiops_truncatus
ENSCJAG00000018434	LARP4B	87	86.491	ENSUAMG00000016461	LARP4B	95	86.491	Ursus_americanus
ENSCJAG00000018434	LARP4B	100	85.250	ENSUMAG00000016127	LARP4B	100	85.250	Ursus_maritimus
ENSCJAG00000018434	LARP4B	51	94.944	ENSVPAG00000000128	-	73	94.944	Vicugna_pacos
ENSCJAG00000018434	LARP4B	100	84.574	ENSVVUG00000008641	LARP4B	100	84.574	Vulpes_vulpes
ENSCJAG00000018434	LARP4B	99	68.079	ENSXETG00000016882	larp4b	100	68.079	Xenopus_tropicalis
ENSCJAG00000018434	LARP4B	100	52.338	ENSXCOG00000019952	LARP4B	77	77.397	Xiphophorus_couchianus
ENSCJAG00000018434	LARP4B	100	54.750	ENSXMAG00000021533	LARP4B	100	55.625	Xiphophorus_maculatus