EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000018506 (Gene tree)
Gene ID: 100404360
Gene Symbol: -
Alias: -
Full Name: BRX1%2C biogenesis of ribosomes
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 9500 bases
Position: chrNTIC01011112.1:34720393-34729892
Accession: 100404360
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000034332	Brix	PF04427.18	1.7e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000036264	-	1062	-	ENSCJAP00000034332	353 (aa)	XP_002745117	F6YS13

Gene Model

Click here to download ENSCJAG00000018506's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000018506's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000018506	-	100	97.450	ENSCJAG00000007390	-	100	97.450

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000018506	-	100	96.884	ENSG00000113460	BRIX1	100	96.884	Homo_sapiens
ENSCJAG00000018506	-	99	71.875	ENSAPOG00000020334	bxdc2	86	80.339	Acanthochromis_polyacanthus
ENSCJAG00000018506	-	100	92.068	ENSAMEG00000003295	BRIX1	100	92.068	Ailuropoda_melanoleuca
ENSCJAG00000018506	-	91	72.981	ENSACIG00000017003	bxdc2	98	71.091	Amphilophus_citrinellus
ENSCJAG00000018506	-	89	77.460	ENSAOCG00000000941	bxdc2	100	72.727	Amphiprion_ocellaris
ENSCJAG00000018506	-	86	78.431	ENSAPEG00000017124	bxdc2	98	73.469	Amphiprion_percula
ENSCJAG00000018506	-	98	71.264	ENSATEG00000016635	bxdc2	99	70.690	Anabas_testudineus
ENSCJAG00000018506	-	82	74.315	ENSAPLG00000006647	BRIX1	98	74.315	Anas_platyrhynchos
ENSCJAG00000018506	-	98	74.148	ENSACAG00000008586	BRIX1	99	73.504	Anolis_carolinensis
ENSCJAG00000018506	-	100	90.368	ENSANAG00000010505	-	100	90.368	Aotus_nancymaae
ENSCJAG00000018506	-	100	96.143	ENSANAG00000022329	-	100	96.143	Aotus_nancymaae
ENSCJAG00000018506	-	97	70.893	ENSACLG00000005213	bxdc2	86	78.305	Astatotilapia_calliptera
ENSCJAG00000018506	-	89	72.204	ENSAMXG00000043121	bxdc2	99	68.466	Astyanax_mexicanus
ENSCJAG00000018506	-	100	92.351	ENSBTAG00000019211	BRIX1	100	92.351	Bos_taurus
ENSCJAG00000018506	-	81	45.804	WBGene00019678	K12H4.3	81	45.804	Caenorhabditis_elegans
ENSCJAG00000018506	-	100	88.952	ENSCAFG00000018797	BRIX1	100	88.952	Canis_familiaris
ENSCJAG00000018506	-	100	82.720	ENSCAFG00020016783	BRIX1	100	82.720	Canis_lupus_dingo
ENSCJAG00000018506	-	100	88.385	ENSCHIG00000015024	BRIX1	100	88.385	Capra_hircus
ENSCJAG00000018506	-	100	91.785	ENSTSYG00000002898	BRIX1	100	91.501	Carlito_syrichta
ENSCJAG00000018506	-	85	76.333	ENSCAPG00000009776	BRIX1	100	76.333	Cavia_aperea
ENSCJAG00000018506	-	94	90.060	ENSCPOG00000022064	BRIX1	100	87.819	Cavia_porcellus
ENSCJAG00000018506	-	100	98.867	ENSCCAG00000033405	BRIX1	100	98.867	Cebus_capucinus
ENSCJAG00000018506	-	99	96.296	ENSCATG00000037721	BRIX1	99	96.296	Cercocebus_atys
ENSCJAG00000018506	-	99	91.168	ENSCLAG00000008124	BRIX1	99	91.168	Chinchilla_lanigera
ENSCJAG00000018506	-	100	95.751	ENSCSAG00000017117	BRIX1	100	95.751	Chlorocebus_sabaeus
ENSCJAG00000018506	-	100	91.501	ENSCHOG00000001790	-	100	91.501	Choloepus_hoffmanni
ENSCJAG00000018506	-	99	74.499	ENSCHOG00000012227	-	100	74.499	Choloepus_hoffmanni
ENSCJAG00000018506	-	99	75.143	ENSCPBG00000021309	BRIX1	99	76.923	Chrysemys_picta_bellii
ENSCJAG00000018506	-	73	57.143	ENSCING00000001695	-	97	57.143	Ciona_intestinalis
ENSCJAG00000018506	-	86	52.941	ENSCSAVG00000008644	-	85	58.238	Ciona_savignyi
ENSCJAG00000018506	-	99	96.866	ENSCANG00000022969	BRIX1	98	96.866	Colobus_angolensis_palliatus
ENSCJAG00000018506	-	100	88.952	ENSCGRG00001007932	Brix1	100	88.952	Cricetulus_griseus_chok1gshd
ENSCJAG00000018506	-	100	88.952	ENSCGRG00000016743	Brix1	100	88.952	Cricetulus_griseus_crigri
ENSCJAG00000018506	-	99	70.000	ENSCSEG00000019821	bxdc2	100	69.034	Cynoglossus_semilaevis
ENSCJAG00000018506	-	97	71.137	ENSCVAG00000016942	bxdc2	98	71.137	Cyprinodon_variegatus
ENSCJAG00000018506	-	82	72.069	ENSDARG00000098935	bxdc2	76	70.946	Danio_rerio
ENSCJAG00000018506	-	100	90.935	ENSDNOG00000002878	BRIX1	100	90.935	Dasypus_novemcinctus
ENSCJAG00000018506	-	100	90.085	ENSDORG00000009369	Brix1	100	90.085	Dipodomys_ordii
ENSCJAG00000018506	-	72	58.431	FBgn0035524	CG11583	64	62.996	Drosophila_melanogaster
ENSCJAG00000018506	-	99	83.668	ENSETEG00000017842	-	100	83.668	Echinops_telfairi
ENSCJAG00000018506	-	100	82.153	ENSETEG00000017329	-	100	82.153	Echinops_telfairi
ENSCJAG00000018506	-	72	72.835	ENSEBUG00000007717	BRIX1	81	71.538	Eptatretus_burgeri
ENSCJAG00000018506	-	100	94.334	ENSEASG00005014968	BRIX1	100	94.334	Equus_asinus_asinus
ENSCJAG00000018506	-	100	93.768	ENSECAG00000000377	BRIX1	92	93.768	Equus_caballus
ENSCJAG00000018506	-	100	81.020	ENSEEUG00000008350	BRIX1	100	81.020	Erinaceus_europaeus
ENSCJAG00000018506	-	98	71.839	ENSELUG00000009050	bxdc2	95	71.839	Esox_lucius
ENSCJAG00000018506	-	100	94.051	ENSFCAG00000042465	BRIX1	100	94.051	Felis_catus
ENSCJAG00000018506	-	94	74.852	ENSFALG00000002106	BRIX1	97	73.088	Ficedula_albicollis
ENSCJAG00000018506	-	100	89.802	ENSFDAG00000018960	BRIX1	100	89.802	Fukomys_damarensis
ENSCJAG00000018506	-	98	71.098	ENSFHEG00000004488	bxdc2	99	71.098	Fundulus_heteroclitus
ENSCJAG00000018506	-	76	79.259	ENSGMOG00000002425	bxdc2	94	79.259	Gadus_morhua
ENSCJAG00000018506	-	95	77.448	ENSGALG00000003373	BRIX1	99	75.143	Gallus_gallus
ENSCJAG00000018506	-	92	71.951	ENSGAFG00000011947	bxdc2	99	69.628	Gambusia_affinis
ENSCJAG00000018506	-	93	70.948	ENSGACG00000016491	bxdc2	100	68.696	Gasterosteus_aculeatus
ENSCJAG00000018506	-	92	78.704	ENSGAGG00000011959	BRIX1	99	76.218	Gopherus_agassizii
ENSCJAG00000018506	-	100	97.450	ENSGGOG00000004225	BRIX1	100	97.450	Gorilla_gorilla
ENSCJAG00000018506	-	97	71.930	ENSHBUG00000017923	bxdc2	86	78.644	Haplochromis_burtoni
ENSCJAG00000018506	-	97	72.303	ENSHGLG00000017782	-	100	72.303	Heterocephalus_glaber_female
ENSCJAG00000018506	-	96	71.598	ENSHGLG00000010349	-	98	71.598	Heterocephalus_glaber_female
ENSCJAG00000018506	-	100	72.521	ENSHGLG00000000296	-	98	75.504	Heterocephalus_glaber_female
ENSCJAG00000018506	-	100	90.652	ENSHGLG00000004566	BRIX1	100	90.652	Heterocephalus_glaber_female
ENSCJAG00000018506	-	100	71.388	ENSHGLG00000002055	-	100	71.388	Heterocephalus_glaber_female
ENSCJAG00000018506	-	99	81.534	ENSHGLG00100000068	-	97	80.966	Heterocephalus_glaber_male
ENSCJAG00000018506	-	93	77.744	ENSHGLG00100000909	-	84	75.071	Heterocephalus_glaber_male
ENSCJAG00000018506	-	100	69.972	ENSHGLG00100001527	-	100	69.972	Heterocephalus_glaber_male
ENSCJAG00000018506	-	100	91.218	ENSHGLG00100002204	-	100	91.218	Heterocephalus_glaber_male
ENSCJAG00000018506	-	99	70.170	ENSHCOG00000011674	bxdc2	100	70.170	Hippocampus_comes
ENSCJAG00000018506	-	94	68.769	ENSIPUG00000015099	brix1	95	68.769	Ictalurus_punctatus
ENSCJAG00000018506	-	100	91.218	ENSSTOG00000009600	BRIX1	100	91.218	Ictidomys_tridecemlineatus
ENSCJAG00000018506	-	100	83.569	ENSJJAG00000001423	-	100	83.569	Jaculus_jaculus
ENSCJAG00000018506	-	98	77.011	ENSJJAG00000009708	-	99	77.011	Jaculus_jaculus
ENSCJAG00000018506	-	75	92.395	ENSJJAG00000001806	-	100	92.395	Jaculus_jaculus
ENSCJAG00000018506	-	100	81.303	ENSJJAG00000004662	-	100	81.303	Jaculus_jaculus
ENSCJAG00000018506	-	98	71.143	ENSKMAG00000014487	bxdc2	99	70.402	Kryptolebias_marmoratus
ENSCJAG00000018506	-	97	66.764	ENSLBEG00000018123	bxdc2	99	67.052	Labrus_bergylta
ENSCJAG00000018506	-	98	73.121	ENSLACG00000005971	BRIX1	99	73.121	Latimeria_chalumnae
ENSCJAG00000018506	-	97	69.565	ENSLOCG00000011774	bxdc2	99	70.520	Lepisosteus_oculatus
ENSCJAG00000018506	-	100	91.501	ENSLAFG00000007249	BRIX1	100	91.501	Loxodonta_africana
ENSCJAG00000018506	-	100	96.317	ENSMFAG00000033107	BRIX1	100	96.317	Macaca_fascicularis
ENSCJAG00000018506	-	100	96.317	ENSMMUG00000038794	BRIX1	100	96.317	Macaca_mulatta
ENSCJAG00000018506	-	100	95.751	ENSMNEG00000039324	BRIX1	100	95.751	Macaca_nemestrina
ENSCJAG00000018506	-	100	96.317	ENSMLEG00000041564	BRIX1	100	96.317	Mandrillus_leucophaeus
ENSCJAG00000018506	-	86	78.218	ENSMAMG00000015004	bxdc2	100	71.510	Mastacembelus_armatus
ENSCJAG00000018506	-	97	71.930	ENSMZEG00005019808	bxdc2	86	78.644	Maylandia_zebra
ENSCJAG00000018506	-	54	78.307	ENSMGAG00000003156	BRIX1	99	75.000	Meleagris_gallopavo
ENSCJAG00000018506	-	85	93.667	ENSMAUG00000014172	Brix1	100	93.667	Mesocricetus_auratus
ENSCJAG00000018506	-	100	93.484	ENSMICG00000005672	BRIX1	100	93.484	Microcebus_murinus
ENSCJAG00000018506	-	100	88.952	ENSMOCG00000018798	Brix1	100	88.952	Microtus_ochrogaster
ENSCJAG00000018506	-	97	73.021	ENSMMOG00000000861	bxdc2	99	72.515	Mola_mola
ENSCJAG00000018506	-	98	81.556	ENSMODG00000020386	BRIX1	98	81.268	Monodelphis_domestica
ENSCJAG00000018506	-	99	64.857	ENSMALG00000020437	bxdc2	100	64.857	Monopterus_albus
ENSCJAG00000018506	-	100	90.368	MGP_CAROLIEiJ_G0019665	Brix1	100	90.368	Mus_caroli
ENSCJAG00000018506	-	100	90.935	ENSMUSG00000022247	Brix1	100	90.935	Mus_musculus
ENSCJAG00000018506	-	100	90.935	MGP_SPRETEiJ_G0020562	Brix1	100	90.935	Mus_spretus
ENSCJAG00000018506	-	100	92.635	ENSMPUG00000015137	BRIX1	100	92.635	Mustela_putorius_furo
ENSCJAG00000018506	-	75	95.076	ENSMLUG00000029255	BRIX1	100	95.076	Myotis_lucifugus
ENSCJAG00000018506	-	98	92.775	ENSNGAG00000002585	-	100	92.775	Nannospalax_galili
ENSCJAG00000018506	-	100	92.635	ENSNGAG00000021812	-	100	92.635	Nannospalax_galili
ENSCJAG00000018506	-	97	71.345	ENSNBRG00000008850	bxdc2	81	77.966	Neolamprologus_brichardi
ENSCJAG00000018506	-	100	92.351	ENSNLEG00000032149	BRIX1	100	92.351	Nomascus_leucogenys
ENSCJAG00000018506	-	98	67.723	ENSMEUG00000016482	BRIX1	98	68.588	Notamacropus_eugenii
ENSCJAG00000018506	-	57	95.522	ENSOPRG00000012886	BRIX1	100	95.522	Ochotona_princeps
ENSCJAG00000018506	-	83	91.781	ENSODEG00000019171	-	100	91.781	Octodon_degus
ENSCJAG00000018506	-	100	60.340	ENSODEG00000002389	-	100	60.907	Octodon_degus
ENSCJAG00000018506	-	93	77.204	ENSODEG00000010997	-	98	76.504	Octodon_degus
ENSCJAG00000018506	-	99	70.621	ENSONIG00000007725	bxdc2	87	76.873	Oreochromis_niloticus
ENSCJAG00000018506	-	84	84.122	ENSOANG00000014525	-	99	84.122	Ornithorhynchus_anatinus
ENSCJAG00000018506	-	100	91.218	ENSOCUG00000014478	BRIX1	100	91.218	Oryctolagus_cuniculus
ENSCJAG00000018506	-	99	71.307	ENSORLG00000005895	bxdc2	100	70.857	Oryzias_latipes
ENSCJAG00000018506	-	99	71.307	ENSORLG00020005201	bxdc2	100	70.857	Oryzias_latipes_hni
ENSCJAG00000018506	-	99	71.023	ENSORLG00015011685	bxdc2	100	70.571	Oryzias_latipes_hsok
ENSCJAG00000018506	-	99	70.286	ENSOMEG00000007680	bxdc2	88	76.974	Oryzias_melastigma
ENSCJAG00000018506	-	100	93.201	ENSOGAG00000014827	BRIX1	100	93.201	Otolemur_garnettii
ENSCJAG00000018506	-	100	92.351	ENSOARG00000011539	BRIX1	100	92.351	Ovis_aries
ENSCJAG00000018506	-	100	96.884	ENSPPAG00000038183	BRIX1	100	96.884	Pan_paniscus
ENSCJAG00000018506	-	100	93.768	ENSPPRG00000023961	BRIX1	100	93.768	Panthera_pardus
ENSCJAG00000018506	-	100	94.051	ENSPTIG00000006466	BRIX1	100	94.051	Panthera_tigris_altaica
ENSCJAG00000018506	-	100	97.167	ENSPTRG00000016784	BRIX1	100	97.167	Pan_troglodytes
ENSCJAG00000018506	-	99	96.839	ENSPANG00000016504	BRIX1	97	96.839	Papio_anubis
ENSCJAG00000018506	-	90	74.062	ENSPKIG00000005920	bxdc2	85	70.977	Paramormyrops_kingsleyae
ENSCJAG00000018506	-	77	80.515	ENSPSIG00000011219	BRIX1	99	80.515	Pelodiscus_sinensis
ENSCJAG00000018506	-	97	64.809	ENSPMGG00000022988	bxdc2	98	64.809	Periophthalmus_magnuspinnatus
ENSCJAG00000018506	-	100	90.652	ENSPEMG00000016920	Brix1	100	90.652	Peromyscus_maniculatus_bairdii
ENSCJAG00000018506	-	98	81.268	ENSPCIG00000022778	BRIX1	98	82.133	Phascolarctos_cinereus
ENSCJAG00000018506	-	98	69.628	ENSPFOG00000008577	bxdc2	82	69.714	Poecilia_formosa
ENSCJAG00000018506	-	98	69.628	ENSPLAG00000006772	bxdc2	91	69.714	Poecilia_latipinna
ENSCJAG00000018506	-	98	69.628	ENSPMEG00000020229	bxdc2	91	69.714	Poecilia_mexicana
ENSCJAG00000018506	-	98	69.628	ENSPREG00000017461	bxdc2	91	70.000	Poecilia_reticulata
ENSCJAG00000018506	-	100	93.201	ENSPPYG00000015390	BRIX1	100	93.201	Pongo_abelii
ENSCJAG00000018506	-	53	89.840	ENSPCAG00000005158	-	100	89.840	Procavia_capensis
ENSCJAG00000018506	-	97	67.155	ENSPCOG00000016748	-	94	69.605	Propithecus_coquereli
ENSCJAG00000018506	-	100	94.051	ENSPCOG00000018281	-	100	94.051	Propithecus_coquereli
ENSCJAG00000018506	-	85	90.667	ENSPVAG00000016925	BRIX1	100	90.667	Pteropus_vampyrus
ENSCJAG00000018506	-	97	71.930	ENSPNYG00000007707	bxdc2	86	78.644	Pundamilia_nyererei
ENSCJAG00000018506	-	92	70.948	ENSPNAG00000010431	bxdc2	99	67.705	Pygocentrus_nattereri
ENSCJAG00000018506	-	100	90.652	ENSRNOG00000018021	Brix1	100	90.368	Rattus_norvegicus
ENSCJAG00000018506	-	99	96.581	ENSRBIG00000042083	BRIX1	98	96.581	Rhinopithecus_bieti
ENSCJAG00000018506	-	99	96.866	ENSRROG00000031228	BRIX1	98	96.866	Rhinopithecus_roxellana
ENSCJAG00000018506	-	71	48.289	YOL077C	-	90	48.289	Saccharomyces_cerevisiae
ENSCJAG00000018506	-	100	97.734	ENSSBOG00000017845	-	100	97.734	Saimiri_boliviensis_boliviensis
ENSCJAG00000018506	-	100	98.867	ENSSBOG00000033290	-	100	98.867	Saimiri_boliviensis_boliviensis
ENSCJAG00000018506	-	93	82.121	ENSSHAG00000010794	BRIX1	98	81.556	Sarcophilus_harrisii
ENSCJAG00000018506	-	92	72.171	ENSSFOG00015022435	brix1	99	69.143	Scleropages_formosus
ENSCJAG00000018506	-	97	69.565	ENSSMAG00000005909	bxdc2	99	70.760	Scophthalmus_maximus
ENSCJAG00000018506	-	97	74.344	ENSSDUG00000016234	bxdc2	98	73.900	Seriola_dumerili
ENSCJAG00000018506	-	97	74.052	ENSSLDG00000007044	bxdc2	98	73.607	Seriola_lalandi_dorsalis
ENSCJAG00000018506	-	100	87.187	ENSSARG00000009879	BRIX1	100	87.187	Sorex_araneus
ENSCJAG00000018506	-	83	80.952	ENSSPUG00000019166	-	98	80.952	Sphenodon_punctatus
ENSCJAG00000018506	-	99	70.487	ENSSPUG00000000011	-	99	70.487	Sphenodon_punctatus
ENSCJAG00000018506	-	99	71.388	ENSSPAG00000006309	bxdc2	100	71.591	Stegastes_partitus
ENSCJAG00000018506	-	100	93.484	ENSSSCG00000016827	BRIX1	99	93.484	Sus_scrofa
ENSCJAG00000018506	-	95	75.150	ENSTGUG00000001961	BRIX1	99	73.352	Taeniopygia_guttata
ENSCJAG00000018506	-	97	71.594	ENSTRUG00000011403	bxdc2	86	78.305	Takifugu_rubripes
ENSCJAG00000018506	-	92	72.923	ENSTNIG00000007517	bxdc2	98	70.809	Tetraodon_nigroviridis
ENSCJAG00000018506	-	85	89.000	ENSTBEG00000011652	BRIX1	100	89.000	Tupaia_belangeri
ENSCJAG00000018506	-	100	92.068	ENSTTRG00000003262	BRIX1	100	92.068	Tursiops_truncatus
ENSCJAG00000018506	-	100	79.494	ENSUAMG00000022481	BRIX1	100	79.661	Ursus_americanus
ENSCJAG00000018506	-	100	93.201	ENSUMAG00000012900	BRIX1	100	93.201	Ursus_maritimus
ENSCJAG00000018506	-	63	93.213	ENSVPAG00000010128	BRIX1	63	93.213	Vicugna_pacos
ENSCJAG00000018506	-	100	84.419	ENSVVUG00000022099	BRIX1	100	84.419	Vulpes_vulpes
ENSCJAG00000018506	-	98	74.640	ENSXETG00000000703	brix1	100	74.640	Xenopus_tropicalis
ENSCJAG00000018506	-	98	70.690	ENSXCOG00000002461	bxdc2	99	70.000	Xiphophorus_couchianus
ENSCJAG00000018506	-	98	70.286	ENSXMAG00000004284	bxdc2	86	70.286	Xiphophorus_maculatus