EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000018642 (Gene tree)
Gene ID: 100407949
Gene Symbol: -
Alias: -
Full Name: La ribonucleoprotein domain family member 6
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 21211 bases
Position: chrNTIC01038834.1:126980841-127002051
Accession: 100407949
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000034638	La	PF05383.17	1.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000036579	-	1476	-	ENSCJAP00000034638	491 (aa)	XP_002753339	F7HMZ1
ENSCJAT00000036577	-	282	-	ENSCJAP00000034636	94 (aa)	-	F7HMZ5

Gene Model

Click here to download ENSCJAG00000018642's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000018642's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000018642	-	100	99.389	ENSCJAG00000046236	-	100	99.389

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000018642	-	100	98.574	ENSG00000166173	LARP6	100	100.000	Homo_sapiens
ENSCJAG00000018642	-	95	56.701	ENSAPOG00000021773	larp6a	63	59.101	Acanthochromis_polyacanthus
ENSCJAG00000018642	-	87	91.589	ENSAMEG00000008897	LARP6	100	91.589	Ailuropoda_melanoleuca
ENSCJAG00000018642	-	95	57.320	ENSACIG00000005166	larp6a	86	59.551	Amphilophus_citrinellus
ENSCJAG00000018642	-	95	56.701	ENSAOCG00000002284	larp6a	63	59.101	Amphiprion_ocellaris
ENSCJAG00000018642	-	95	56.701	ENSAPEG00000008077	larp6a	84	59.101	Amphiprion_percula
ENSCJAG00000018642	-	95	56.495	ENSATEG00000004018	larp6a	62	58.876	Anabas_testudineus
ENSCJAG00000018642	-	85	71.395	ENSAPLG00000009914	LARP6	99	71.395	Anas_platyrhynchos
ENSCJAG00000018642	-	84	67.952	ENSACAG00000008613	LARP6	97	67.952	Anolis_carolinensis
ENSCJAG00000018642	-	100	99.389	ENSANAG00000024860	LARP6	100	99.389	Aotus_nancymaae
ENSCJAG00000018642	-	95	57.113	ENSACLG00000018561	larp6a	61	59.326	Astatotilapia_calliptera
ENSCJAG00000018642	-	83	41.505	ENSAMXG00000036816	-	93	41.106	Astyanax_mexicanus
ENSCJAG00000018642	-	90	57.081	ENSAMXG00000029387	larp6a	68	57.895	Astyanax_mexicanus
ENSCJAG00000018642	-	100	92.480	ENSBTAG00000003915	LARP6	100	92.480	Bos_taurus
ENSCJAG00000018642	-	86	93.412	ENSCAFG00000017616	LARP6	99	93.412	Canis_familiaris
ENSCJAG00000018642	-	100	90.854	ENSCAFG00020007296	LARP6	100	91.667	Canis_lupus_dingo
ENSCJAG00000018642	-	100	92.480	ENSCHIG00000013742	LARP6	100	92.480	Capra_hircus
ENSCJAG00000018642	-	86	93.176	ENSTSYG00000028124	LARP6	87	93.176	Carlito_syrichta
ENSCJAG00000018642	-	86	91.274	ENSCAPG00000015452	LARP6	99	91.274	Cavia_aperea
ENSCJAG00000018642	-	100	90.467	ENSCPOG00000022687	LARP6	100	90.467	Cavia_porcellus
ENSCJAG00000018642	-	100	98.371	ENSCCAG00000036320	LARP6	100	98.371	Cebus_capucinus
ENSCJAG00000018642	-	100	98.778	ENSCATG00000042432	LARP6	100	98.778	Cercocebus_atys
ENSCJAG00000018642	-	100	92.698	ENSCLAG00000007893	LARP6	100	92.698	Chinchilla_lanigera
ENSCJAG00000018642	-	100	98.778	ENSCSAG00000013672	LARP6	100	98.778	Chlorocebus_sabaeus
ENSCJAG00000018642	-	97	92.887	ENSCHOG00000003318	LARP6	100	92.887	Choloepus_hoffmanni
ENSCJAG00000018642	-	88	70.602	ENSCPBG00000010771	LARP6	83	70.602	Chrysemys_picta_bellii
ENSCJAG00000018642	-	86	99.057	ENSCANG00000025833	LARP6	100	99.057	Colobus_angolensis_palliatus
ENSCJAG00000018642	-	100	91.057	ENSCGRG00001024472	Larp6	100	91.057	Cricetulus_griseus_chok1gshd
ENSCJAG00000018642	-	100	91.057	ENSCGRG00000004527	Larp6	100	91.057	Cricetulus_griseus_crigri
ENSCJAG00000018642	-	95	57.025	ENSCSEG00000011196	larp6a	65	59.234	Cynoglossus_semilaevis
ENSCJAG00000018642	-	87	58.652	ENSCVAG00000009605	larp6a	64	58.652	Cyprinodon_variegatus
ENSCJAG00000018642	-	87	58.036	ENSDARG00000005355	larp6a	97	61.033	Danio_rerio
ENSCJAG00000018642	-	100	93.089	ENSDNOG00000042993	LARP6	100	92.683	Dasypus_novemcinctus
ENSCJAG00000018642	-	100	80.972	ENSDORG00000023910	Larp6	100	80.364	Dipodomys_ordii
ENSCJAG00000018642	-	79	90.400	ENSETEG00000020390	LARP6	78	90.400	Echinops_telfairi
ENSCJAG00000018642	-	100	94.715	ENSEASG00005005490	LARP6	73	94.715	Equus_asinus_asinus
ENSCJAG00000018642	-	100	94.512	ENSECAG00000014190	LARP6	100	94.512	Equus_caballus
ENSCJAG00000018642	-	88	58.352	ENSELUG00000007341	larp6a	64	58.352	Esox_lucius
ENSCJAG00000018642	-	100	92.886	ENSFCAG00000001361	LARP6	100	92.886	Felis_catus
ENSCJAG00000018642	-	88	68.636	ENSFALG00000012389	LARP6	99	65.625	Ficedula_albicollis
ENSCJAG00000018642	-	89	92.955	ENSFDAG00000019994	LARP6	86	92.955	Fukomys_damarensis
ENSCJAG00000018642	-	95	56.289	ENSFHEG00000010312	larp6a	63	58.652	Fundulus_heteroclitus
ENSCJAG00000018642	-	97	67.850	ENSGALG00000004046	LARP6	94	67.641	Gallus_gallus
ENSCJAG00000018642	-	87	58.876	ENSGAFG00000009426	larp6a	65	58.876	Gambusia_affinis
ENSCJAG00000018642	-	86	59.497	ENSGACG00000014622	larp6a	97	59.497	Gasterosteus_aculeatus
ENSCJAG00000018642	-	90	66.216	ENSGAGG00000010802	LARP6	58	70.707	Gopherus_agassizii
ENSCJAG00000018642	-	86	98.821	ENSGGOG00000024151	LARP6	100	98.821	Gorilla_gorilla
ENSCJAG00000018642	-	95	57.113	ENSHBUG00000021014	larp6a	61	59.326	Haplochromis_burtoni
ENSCJAG00000018642	-	100	92.525	ENSHGLG00000015112	LARP6	100	92.525	Heterocephalus_glaber_female
ENSCJAG00000018642	-	86	94.824	ENSHGLG00100013159	LARP6	100	94.824	Heterocephalus_glaber_male
ENSCJAG00000018642	-	95	55.852	ENSHCOG00000001241	larp6a	84	58.145	Hippocampus_comes
ENSCJAG00000018642	-	85	59.039	ENSIPUG00000010187	larp6	65	59.908	Ictalurus_punctatus
ENSCJAG00000018642	-	90	36.222	ENSIPUG00000002828	-	96	36.585	Ictalurus_punctatus
ENSCJAG00000018642	-	94	95.011	ENSSTOG00000024279	LARP6	98	94.923	Ictidomys_tridecemlineatus
ENSCJAG00000018642	-	100	88.821	ENSJJAG00000011013	Larp6	100	88.821	Jaculus_jaculus
ENSCJAG00000018642	-	87	59.865	ENSKMAG00000001702	larp6a	60	59.865	Kryptolebias_marmoratus
ENSCJAG00000018642	-	95	55.441	ENSLBEG00000000170	larp6a	84	57.271	Labrus_bergylta
ENSCJAG00000018642	-	96	65.401	ENSLACG00000018706	LARP6	88	64.768	Latimeria_chalumnae
ENSCJAG00000018642	-	83	41.469	ENSLACG00000002786	-	96	44.153	Latimeria_chalumnae
ENSCJAG00000018642	-	96	59.711	ENSLOCG00000014592	larp6a	69	59.138	Lepisosteus_oculatus
ENSCJAG00000018642	-	85	44.028	ENSLOCG00000008547	-	83	43.794	Lepisosteus_oculatus
ENSCJAG00000018642	-	91	93.065	ENSLAFG00000016343	LARP6	100	93.065	Loxodonta_africana
ENSCJAG00000018642	-	91	99.109	ENSMFAG00000035507	LARP6	100	99.109	Macaca_fascicularis
ENSCJAG00000018642	-	100	96.334	ENSMMUG00000004429	LARP6	100	96.334	Macaca_mulatta
ENSCJAG00000018642	-	100	98.982	ENSMNEG00000045335	LARP6	100	98.982	Macaca_nemestrina
ENSCJAG00000018642	-	86	99.057	ENSMLEG00000038587	LARP6	100	99.057	Mandrillus_leucophaeus
ENSCJAG00000018642	-	95	56.674	ENSMAMG00000005261	larp6a	62	59.060	Mastacembelus_armatus
ENSCJAG00000018642	-	95	57.113	ENSMZEG00005005774	larp6a	61	59.326	Maylandia_zebra
ENSCJAG00000018642	-	85	71.564	ENSMGAG00000005077	LARP6	99	71.564	Meleagris_gallopavo
ENSCJAG00000018642	-	100	90.650	ENSMAUG00000018486	Larp6	100	90.650	Mesocricetus_auratus
ENSCJAG00000018642	-	100	91.870	ENSMICG00000011234	LARP6	100	91.870	Microcebus_murinus
ENSCJAG00000018642	-	100	90.244	ENSMOCG00000010492	Larp6	100	90.244	Microtus_ochrogaster
ENSCJAG00000018642	-	95	57.645	ENSMMOG00000016284	larp6a	85	60.135	Mola_mola
ENSCJAG00000018642	-	97	74.792	ENSMODG00000009034	LARP6	93	74.583	Monodelphis_domestica
ENSCJAG00000018642	-	95	57.290	ENSMALG00000014439	larp6a	84	59.284	Monopterus_albus
ENSCJAG00000018642	-	98	91.718	MGP_CAROLIEiJ_G0032314	Larp6	98	91.718	Mus_caroli
ENSCJAG00000018642	-	100	90.854	ENSMUSG00000034839	Larp6	100	90.854	Mus_musculus
ENSCJAG00000018642	-	100	90.041	MGP_PahariEiJ_G0015180	Larp6	100	90.041	Mus_pahari
ENSCJAG00000018642	-	100	90.650	MGP_SPRETEiJ_G0033452	Larp6	100	90.650	Mus_spretus
ENSCJAG00000018642	-	87	92.290	ENSMPUG00000017086	LARP6	100	92.290	Mustela_putorius_furo
ENSCJAG00000018642	-	100	94.106	ENSMLUG00000010319	LARP6	100	94.106	Myotis_lucifugus
ENSCJAG00000018642	-	100	90.244	ENSNGAG00000014238	Larp6	100	90.244	Nannospalax_galili
ENSCJAG00000018642	-	95	57.113	ENSNBRG00000008120	larp6a	84	59.326	Neolamprologus_brichardi
ENSCJAG00000018642	-	100	98.371	ENSNLEG00000013691	LARP6	100	98.371	Nomascus_leucogenys
ENSCJAG00000018642	-	85	76.257	ENSMEUG00000002270	LARP6	98	66.049	Notamacropus_eugenii
ENSCJAG00000018642	-	71	80.342	ENSOPRG00000004868	-	99	80.342	Ochotona_princeps
ENSCJAG00000018642	-	100	88.032	ENSODEG00000015958	LARP6	100	88.032	Octodon_degus
ENSCJAG00000018642	-	95	57.084	ENSONIG00000002901	larp6a	84	59.284	Oreochromis_niloticus
ENSCJAG00000018642	-	86	83.215	ENSOCUG00000009306	LARP6	99	83.215	Oryctolagus_cuniculus
ENSCJAG00000018642	-	96	57.407	ENSORLG00000014256	larp6a	92	57.407	Oryzias_latipes
ENSCJAG00000018642	-	96	57.407	ENSORLG00020019657	larp6a	63	59.775	Oryzias_latipes_hni
ENSCJAG00000018642	-	96	57.407	ENSORLG00015017915	larp6a	63	59.775	Oryzias_latipes_hsok
ENSCJAG00000018642	-	96	57.819	ENSOMEG00000017049	larp6a	63	60.225	Oryzias_melastigma
ENSCJAG00000018642	-	100	91.870	ENSOGAG00000000522	LARP6	100	91.870	Otolemur_garnettii
ENSCJAG00000018642	-	87	92.290	ENSOARG00000018750	LARP6	99	92.290	Ovis_aries
ENSCJAG00000018642	-	86	98.821	ENSPPAG00000031247	LARP6	100	98.821	Pan_paniscus
ENSCJAG00000018642	-	100	92.276	ENSPPRG00000011282	LARP6	100	92.276	Panthera_pardus
ENSCJAG00000018642	-	86	93.412	ENSPTIG00000015318	LARP6	86	93.412	Panthera_tigris_altaica
ENSCJAG00000018642	-	100	98.574	ENSPTRG00000007234	LARP6	100	98.574	Pan_troglodytes
ENSCJAG00000018642	-	100	98.982	ENSPANG00000016362	LARP6	100	98.982	Papio_anubis
ENSCJAG00000018642	-	97	56.088	ENSPKIG00000004511	LARP6	67	57.609	Paramormyrops_kingsleyae
ENSCJAG00000018642	-	96	59.459	ENSPKIG00000020103	larp6a	89	59.459	Paramormyrops_kingsleyae
ENSCJAG00000018642	-	61	80.769	ENSPSIG00000009071	LARP6	89	74.783	Pelodiscus_sinensis
ENSCJAG00000018642	-	95	57.732	ENSPMGG00000006958	larp6a	86	60.225	Periophthalmus_magnuspinnatus
ENSCJAG00000018642	-	100	91.057	ENSPEMG00000012909	Larp6	100	91.057	Peromyscus_maniculatus_bairdii
ENSCJAG00000018642	-	97	76.250	ENSPCIG00000020765	LARP6	93	76.042	Phascolarctos_cinereus
ENSCJAG00000018642	-	87	59.508	ENSPFOG00000014175	larp6a	84	59.508	Poecilia_formosa
ENSCJAG00000018642	-	87	59.551	ENSPLAG00000011105	larp6a	62	59.551	Poecilia_latipinna
ENSCJAG00000018642	-	87	59.326	ENSPMEG00000011085	larp6a	62	59.326	Poecilia_mexicana
ENSCJAG00000018642	-	95	57.320	ENSPREG00000008067	larp6a	63	59.101	Poecilia_reticulata
ENSCJAG00000018642	-	100	98.574	ENSPPYG00000006604	LARP6	100	98.574	Pongo_abelii
ENSCJAG00000018642	-	64	93.333	ENSPCAG00000014197	LARP6	76	93.333	Procavia_capensis
ENSCJAG00000018642	-	100	92.276	ENSPCOG00000022934	LARP6	100	92.276	Propithecus_coquereli
ENSCJAG00000018642	-	100	93.293	ENSPVAG00000005618	LARP6	100	93.293	Pteropus_vampyrus
ENSCJAG00000018642	-	95	57.113	ENSPNYG00000009835	larp6a	84	59.326	Pundamilia_nyererei
ENSCJAG00000018642	-	87	57.494	ENSPNAG00000017966	larp6a	72	58.389	Pygocentrus_nattereri
ENSCJAG00000018642	-	100	89.634	ENSRNOG00000012438	Larp6	100	89.634	Rattus_norvegicus
ENSCJAG00000018642	-	99	94.888	ENSRBIG00000032902	LARP6	99	94.888	Rhinopithecus_bieti
ENSCJAG00000018642	-	99	98.760	ENSRROG00000043074	LARP6	99	98.760	Rhinopithecus_roxellana
ENSCJAG00000018642	-	86	99.292	ENSSBOG00000024190	LARP6	100	99.292	Saimiri_boliviensis_boliviensis
ENSCJAG00000018642	-	87	75.000	ENSSHAG00000018495	LARP6	100	75.000	Sarcophilus_harrisii
ENSCJAG00000018642	-	95	51.674	ENSSFOG00015002254	LARP6	91	52.211	Scleropages_formosus
ENSCJAG00000018642	-	87	58.824	ENSSFOG00015023268	larp6a	84	61.379	Scleropages_formosus
ENSCJAG00000018642	-	95	57.231	ENSSMAG00000009953	larp6a	62	59.685	Scophthalmus_maximus
ENSCJAG00000018642	-	95	57.202	ENSSDUG00000007438	larp6a	62	59.641	Seriola_dumerili
ENSCJAG00000018642	-	95	57.202	ENSSLDG00000016647	larp6a	62	59.641	Seriola_lalandi_dorsalis
ENSCJAG00000018642	-	86	71.327	ENSSPUG00000011312	LARP6	99	71.327	Sphenodon_punctatus
ENSCJAG00000018642	-	95	56.701	ENSSPAG00000020502	larp6a	62	59.101	Stegastes_partitus
ENSCJAG00000018642	-	100	93.089	ENSSSCG00000004974	LARP6	100	93.089	Sus_scrofa
ENSCJAG00000018642	-	85	69.905	ENSTGUG00000005808	LARP6	99	69.905	Taeniopygia_guttata
ENSCJAG00000018642	-	95	57.202	ENSTRUG00000003151	larp6a	65	59.465	Takifugu_rubripes
ENSCJAG00000018642	-	95	56.017	ENSTNIG00000011926	larp6a	89	57.991	Tetraodon_nigroviridis
ENSCJAG00000018642	-	86	92.180	ENSTBEG00000015077	LARP6	99	92.180	Tupaia_belangeri
ENSCJAG00000018642	-	93	86.245	ENSUAMG00000010467	LARP6	89	87.168	Ursus_americanus
ENSCJAG00000018642	-	92	89.579	ENSVVUG00000015227	LARP6	99	89.579	Vulpes_vulpes
ENSCJAG00000018642	-	95	67.021	ENSXETG00000020340	larp6	87	70.302	Xenopus_tropicalis
ENSCJAG00000018642	-	87	59.101	ENSXCOG00000012654	larp6a	89	59.101	Xiphophorus_couchianus
ENSCJAG00000018642	-	87	59.101	ENSXMAG00000021015	larp6a	60	59.101	Xiphophorus_maculatus