EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000018709 (Gene tree)
Gene ID: 100397549
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 12242 bases
Position: chrNTIC01001113.1:115118961-115131202
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000034777	SAP	PF02037.27	2.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000036727	-	2250	-	ENSCJAP00000034777	749 (aa)	-	F7I3L9

Gene Model

Click here to download ENSCJAG00000018709's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000018709's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000018709	-	67	50.397	ENSCJAG00000016914	HNRNPU	74	48.022

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000018709	-	100	98.264	ENSG00000214753	HNRNPUL2	100	98.264	Homo_sapiens
ENSCJAG00000018709	-	96	36.799	ENSAPOG00000005128	si:ch211-107m4.1	80	41.520	Acanthochromis_polyacanthus
ENSCJAG00000018709	-	87	35.801	ENSACIG00000022729	si:ch211-107m4.1	61	42.299	Amphilophus_citrinellus
ENSCJAG00000018709	-	99	34.169	ENSAOCG00000017297	si:ch211-107m4.1	86	35.692	Amphiprion_ocellaris
ENSCJAG00000018709	-	99	33.641	ENSAPEG00000009122	-	87	35.077	Amphiprion_percula
ENSCJAG00000018709	-	84	69.313	ENSACAG00000000746	-	77	70.661	Anolis_carolinensis
ENSCJAG00000018709	-	100	98.932	ENSANAG00000027153	-	100	98.932	Aotus_nancymaae
ENSCJAG00000018709	-	93	36.209	ENSACLG00000018069	si:ch211-107m4.1	81	40.583	Astatotilapia_calliptera
ENSCJAG00000018709	-	99	35.523	ENSAMXG00000033712	si:ch211-107m4.1	70	40.306	Astyanax_mexicanus
ENSCJAG00000018709	-	100	96.804	ENSBTAG00000002510	HNRNPUL2	100	96.804	Bos_taurus
ENSCJAG00000018709	-	100	97.467	ENSCAFG00000015686	-	100	97.467	Canis_familiaris
ENSCJAG00000018709	-	100	97.467	ENSCAFG00020013120	-	100	97.467	Canis_lupus_dingo
ENSCJAG00000018709	-	100	96.937	ENSCHIG00000020213	-	100	96.937	Capra_hircus
ENSCJAG00000018709	-	100	93.591	ENSCCAG00000037674	-	100	93.591	Cebus_capucinus
ENSCJAG00000018709	-	100	97.864	ENSCATG00000034588	-	100	97.864	Cercocebus_atys
ENSCJAG00000018709	-	99	97.992	ENSCSAG00000006701	-	96	97.992	Chlorocebus_sabaeus
ENSCJAG00000018709	-	100	75.654	ENSCPBG00000017963	-	80	81.361	Chrysemys_picta_bellii
ENSCJAG00000018709	-	100	93.992	ENSCGRG00001017076	Hnrnpul2	100	93.458	Cricetulus_griseus_chok1gshd
ENSCJAG00000018709	-	57	43.619	ENSCSEG00000005686	si:ch211-107m4.1	69	43.619	Cynoglossus_semilaevis
ENSCJAG00000018709	-	95	34.789	ENSCVAG00000006862	si:ch211-107m4.1	68	42.727	Cyprinodon_variegatus
ENSCJAG00000018709	-	94	38.544	ENSDARG00000056830	si:ch211-107m4.1	70	43.893	Danio_rerio
ENSCJAG00000018709	-	100	94.674	ENSDNOG00000006508	-	100	95.073	Dasypus_novemcinctus
ENSCJAG00000018709	-	100	94.793	ENSDORG00000008678	Hnrnpul2	100	94.393	Dipodomys_ordii
ENSCJAG00000018709	-	100	98.000	ENSEASG00005011347	-	100	98.000	Equus_asinus_asinus
ENSCJAG00000018709	-	100	97.867	ENSECAG00000020298	-	100	97.867	Equus_caballus
ENSCJAG00000018709	-	76	39.500	ENSELUG00000008134	si:ch211-107m4.1	82	37.905	Esox_lucius
ENSCJAG00000018709	-	100	97.333	ENSFCAG00000014766	-	100	97.333	Felis_catus
ENSCJAG00000018709	-	91	37.127	ENSFHEG00000014731	si:ch211-107m4.1	69	44.828	Fundulus_heteroclitus
ENSCJAG00000018709	-	87	35.863	ENSGAFG00000016579	si:ch211-107m4.1	71	40.377	Gambusia_affinis
ENSCJAG00000018709	-	58	42.630	ENSGACG00000017006	si:ch211-107m4.1	64	44.110	Gasterosteus_aculeatus
ENSCJAG00000018709	-	100	76.347	ENSGAGG00000016818	-	77	81.686	Gopherus_agassizii
ENSCJAG00000018709	-	100	98.264	ENSGGOG00000011722	HNRNPUL2	100	98.264	Gorilla_gorilla
ENSCJAG00000018709	-	93	35.795	ENSHBUG00000013076	si:ch211-107m4.1	89	38.811	Haplochromis_burtoni
ENSCJAG00000018709	-	100	85.314	ENSHGLG00000003285	-	100	86.189	Heterocephalus_glaber_female
ENSCJAG00000018709	-	100	97.330	ENSSTOG00000004327	-	100	97.330	Ictidomys_tridecemlineatus
ENSCJAG00000018709	-	100	94.126	ENSJJAG00000011206	Hnrnpul2	100	93.725	Jaculus_jaculus
ENSCJAG00000018709	-	91	35.396	ENSKMAG00000003651	si:ch211-107m4.1	74	40.535	Kryptolebias_marmoratus
ENSCJAG00000018709	-	99	55.913	ENSLACG00000009304	-	100	56.589	Latimeria_chalumnae
ENSCJAG00000018709	-	100	94.000	ENSLAFG00000005377	-	100	93.600	Loxodonta_africana
ENSCJAG00000018709	-	100	97.864	ENSMFAG00000041014	-	100	97.864	Macaca_fascicularis
ENSCJAG00000018709	-	100	97.864	ENSMNEG00000036955	-	100	97.864	Macaca_nemestrina
ENSCJAG00000018709	-	95	35.090	ENSMAMG00000021489	si:ch211-107m4.1	64	44.289	Mastacembelus_armatus
ENSCJAG00000018709	-	93	36.209	ENSMZEG00005005136	si:ch211-107m4.1	81	40.583	Maylandia_zebra
ENSCJAG00000018709	-	100	94.393	ENSMAUG00000013163	Hnrnpul2	100	94.259	Mesocricetus_auratus
ENSCJAG00000018709	-	100	96.796	ENSMICG00000009943	-	100	96.796	Microcebus_murinus
ENSCJAG00000018709	-	89	97.156	ENSMOCG00000020000	Hnrnpul2	100	92.763	Microtus_ochrogaster
ENSCJAG00000018709	-	54	40.976	ENSMALG00000011564	si:ch211-107m4.1	70	41.855	Monopterus_albus
ENSCJAG00000018709	-	100	94.259	MGP_CAROLIEiJ_G0022656	Hnrnpul2	100	93.725	Mus_caroli
ENSCJAG00000018709	-	100	93.858	ENSMUSG00000071659	Hnrnpul2	100	93.324	Mus_musculus
ENSCJAG00000018709	-	100	93.858	MGP_PahariEiJ_G0014151	Hnrnpul2	100	93.458	Mus_pahari
ENSCJAG00000018709	-	100	93.992	MGP_SPRETEiJ_G0023569	Hnrnpul2	100	93.458	Mus_spretus
ENSCJAG00000018709	-	97	97.376	ENSMPUG00000013707	-	95	97.376	Mustela_putorius_furo
ENSCJAG00000018709	-	100	91.123	ENSMLUG00000000412	-	100	92.428	Myotis_lucifugus
ENSCJAG00000018709	-	100	96.000	ENSNGAG00000012005	Hnrnpul2	100	96.000	Nannospalax_galili
ENSCJAG00000018709	-	91	34.298	ENSNBRG00000000429	si:ch211-107m4.1	59	44.416	Neolamprologus_brichardi
ENSCJAG00000018709	-	100	95.327	ENSNLEG00000004077	-	100	95.327	Nomascus_leucogenys
ENSCJAG00000018709	-	91	35.414	ENSONIG00000005422	si:ch211-107m4.1	81	39.729	Oreochromis_niloticus
ENSCJAG00000018709	-	100	97.463	ENSOCUG00000009474	-	100	97.463	Oryctolagus_cuniculus
ENSCJAG00000018709	-	92	35.143	ENSORLG00000024574	si:ch211-107m4.1	75	40.461	Oryzias_latipes
ENSCJAG00000018709	-	91	35.901	ENSOMEG00000018153	si:ch211-107m4.1	75	41.632	Oryzias_melastigma
ENSCJAG00000018709	-	92	91.702	ENSOGAG00000003302	-	99	91.280	Otolemur_garnettii
ENSCJAG00000018709	-	99	96.662	ENSOARG00000016817	-	100	96.662	Ovis_aries
ENSCJAG00000018709	-	100	97.333	ENSPPRG00000006380	-	100	97.333	Panthera_pardus
ENSCJAG00000018709	-	100	97.997	ENSPTRG00000034359	HNRNPUL2	100	97.997	Pan_troglodytes
ENSCJAG00000018709	-	99	97.858	ENSPANG00000023745	-	99	97.734	Papio_anubis
ENSCJAG00000018709	-	100	94.267	ENSPEMG00000015546	Hnrnpul2	100	93.467	Peromyscus_maniculatus_bairdii
ENSCJAG00000018709	-	86	100.000	ENSPCIG00000015254	-	71	82.748	Phascolarctos_cinereus
ENSCJAG00000018709	-	58	46.136	ENSPFOG00000008050	si:ch211-107m4.1	76	45.538	Poecilia_formosa
ENSCJAG00000018709	-	67	42.346	ENSPLAG00000003485	si:ch211-107m4.1	77	41.551	Poecilia_latipinna
ENSCJAG00000018709	-	67	42.520	ENSPMEG00000005490	si:ch211-107m4.1	77	41.732	Poecilia_mexicana
ENSCJAG00000018709	-	67	41.535	ENSPREG00000014973	si:ch211-107m4.1	77	40.945	Poecilia_reticulata
ENSCJAG00000018709	-	100	91.600	ENSPCAG00000010016	-	100	91.600	Procavia_capensis
ENSCJAG00000018709	-	100	97.063	ENSPCOG00000013502	-	100	97.063	Propithecus_coquereli
ENSCJAG00000018709	-	100	93.625	ENSPVAG00000003475	-	100	92.961	Pteropus_vampyrus
ENSCJAG00000018709	-	100	94.259	ENSRNOG00000019507	Hnrnpul2	100	93.725	Rattus_norvegicus
ENSCJAG00000018709	-	100	98.131	ENSRBIG00000037820	-	100	98.131	Rhinopithecus_bieti
ENSCJAG00000018709	-	100	98.131	ENSRROG00000036561	-	100	98.131	Rhinopithecus_roxellana
ENSCJAG00000018709	-	80	58.974	ENSSFOG00015006544	si:ch211-107m4.1	75	58.974	Scleropages_formosus
ENSCJAG00000018709	-	95	34.388	ENSSMAG00000017226	si:ch211-107m4.1	83	37.294	Scophthalmus_maximus
ENSCJAG00000018709	-	96	37.073	ENSSPAG00000006972	si:ch211-107m4.1	74	42.023	Stegastes_partitus
ENSCJAG00000018709	-	97	90.193	ENSSSCG00000028542	-	84	96.552	Sus_scrofa
ENSCJAG00000018709	-	88	33.680	ENSTRUG00000012843	si:ch211-107m4.1	71	38.302	Takifugu_rubripes
ENSCJAG00000018709	-	85	34.763	ENSTNIG00000000741	si:ch211-107m4.1	80	39.958	Tetraodon_nigroviridis
ENSCJAG00000018709	-	87	97.917	ENSTTRG00000002475	-	87	97.917	Tursiops_truncatus
ENSCJAG00000018709	-	100	98.000	ENSUAMG00000025971	-	100	98.000	Ursus_americanus
ENSCJAG00000018709	-	100	97.600	ENSVVUG00000029847	-	100	97.600	Vulpes_vulpes
ENSCJAG00000018709	-	90	48.915	ENSXETG00000006015	hnrnpul2	71	48.427	Xenopus_tropicalis
ENSCJAG00000018709	-	66	42.369	ENSXMAG00000003224	si:ch211-107m4.1	70	42.558	Xiphophorus_maculatus