EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000018844 (Gene tree)
Gene ID: 100388740
Gene Symbol: DDX50
Alias: GU2|GUB|MGC3199|RH-II/GuB
Full Name: DExD-box helicase 50
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 43122 bases
Position: chrNTIC01004446.1:51312521-51355642
Accession: 100388740
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000067504	GUCT	PF08152.12	4.7e-28	1	1
ENSCJAP00000023612	GUCT	PF08152.12	4.7e-28	1	1
ENSCJAP00000035086	GUCT	PF08152.12	8.8e-28	1	1
ENSCJAP00000035086	ResIII	PF04851.15	5.2e-10	1	1
ENSCJAP00000023612	ResIII	PF04851.15	5.8e-10	1	1
ENSCJAP00000023612	DEAD	PF00270.29	2.4e-47	1	1
ENSCJAP00000035086	DEAD	PF00270.29	2.5e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000024979	DDX50-202	2184	-	ENSCJAP00000023612	727 (aa)	-	F7D636
ENSCJAT00000069192	DDX50-203	1143	-	ENSCJAP00000067504	380 (aa)	-	A0A2R8NFP5
ENSCJAT00000080520	DDX50-204	156	-	ENSCJAP00000066440	51 (aa)	-	A0A2R8MXI6
ENSCJAT00000037047	DDX50-201	2214	-	ENSCJAP00000035086	737 (aa)	XP_002756344	F7I8W5

Gene Model

Click here to download ENSCJAG00000018844's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000018844's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000018844	DDX50	56	33.333	ENSCJAG00000016135	DDX27	62	31.068
ENSCJAG00000018844	DDX50	50	32.345	ENSCJAG00000004019	-	86	31.793
ENSCJAG00000018844	DDX50	99	59.894	ENSCJAG00000012876	DDX21	81	62.671
ENSCJAG00000018844	DDX50	50	31.536	ENSCJAG00000032965	-	87	31.536
ENSCJAG00000018844	DDX50	50	31.818	ENSCJAG00000016777	-	87	31.818
ENSCJAG00000018844	DDX50	50	34.417	ENSCJAG00000011797	DDX17	73	33.846
ENSCJAG00000018844	DDX50	50	30.495	ENSCJAG00000013591	DDX6	71	30.495
ENSCJAG00000018844	DDX50	51	34.896	ENSCJAG00000021414	DDX18	54	34.896
ENSCJAG00000018844	DDX50	50	32.888	ENSCJAG00000048589	-	86	32.888
ENSCJAG00000018844	DDX50	50	33.243	ENSCJAG00000019310	DDX5	62	33.518
ENSCJAG00000018844	DDX50	50	32.533	ENSCJAG00000015114	EIF4A1	88	31.989

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000018844	DDX50	100	99.729	ENSG00000107625	DDX50	100	99.729	Homo_sapiens
ENSCJAG00000018844	DDX50	100	97.561	ENSAMEG00000017992	DDX50	100	97.561	Ailuropoda_melanoleuca
ENSCJAG00000018844	DDX50	92	79.595	ENSANAG00000017785	-	91	79.450	Aotus_nancymaae
ENSCJAG00000018844	DDX50	94	70.950	ENSANAG00000030991	-	87	77.926	Aotus_nancymaae
ENSCJAG00000018844	DDX50	100	97.558	ENSBTAG00000033413	DDX50	100	97.558	Bos_taurus
ENSCJAG00000018844	DDX50	100	97.967	ENSCAFG00000013776	DDX50	100	97.967	Canis_familiaris
ENSCJAG00000018844	DDX50	100	97.967	ENSCAFG00020025977	DDX50	99	97.967	Canis_lupus_dingo
ENSCJAG00000018844	DDX50	100	97.286	ENSCHIG00000000285	DDX50	99	97.286	Capra_hircus
ENSCJAG00000018844	DDX50	100	98.507	ENSTSYG00000004192	DDX50	100	98.507	Carlito_syrichta
ENSCJAG00000018844	DDX50	93	80.621	ENSCAPG00000007230	-	92	80.621	Cavia_aperea
ENSCJAG00000018844	DDX50	99	97.878	ENSCPOG00000002131	-	100	96.608	Cavia_porcellus
ENSCJAG00000018844	DDX50	91	90.476	ENSCCAG00000030543	DDX50	100	90.476	Cebus_capucinus
ENSCJAG00000018844	DDX50	94	85.515	ENSCATG00000035153	-	89	90.282	Cercocebus_atys
ENSCJAG00000018844	DDX50	99	99.469	ENSCATG00000032463	DDX50	99	97.011	Cercocebus_atys
ENSCJAG00000018844	DDX50	99	71.164	ENSCATG00000039259	-	89	69.163	Cercocebus_atys
ENSCJAG00000018844	DDX50	100	97.965	ENSCLAG00000012957	-	100	97.965	Chinchilla_lanigera
ENSCJAG00000018844	DDX50	97	87.534	ENSCLAG00000001553	-	79	88.710	Chinchilla_lanigera
ENSCJAG00000018844	DDX50	99	77.984	ENSCLAG00000001938	-	91	71.975	Chinchilla_lanigera
ENSCJAG00000018844	DDX50	100	100.000	ENSCSAG00000007703	DDX50	100	100.000	Chlorocebus_sabaeus
ENSCJAG00000018844	DDX50	90	95.946	ENSCHOG00000000233	DDX50	100	95.946	Choloepus_hoffmanni
ENSCJAG00000018844	DDX50	92	79.429	ENSCANG00000028077	-	91	69.985	Colobus_angolensis_palliatus
ENSCJAG00000018844	DDX50	99	95.756	ENSCANG00000036450	-	100	86.024	Colobus_angolensis_palliatus
ENSCJAG00000018844	DDX50	98	79.144	ENSCANG00000018820	-	88	73.739	Colobus_angolensis_palliatus
ENSCJAG00000018844	DDX50	99	97.347	ENSCGRG00001020223	Ddx50	92	96.165	Cricetulus_griseus_chok1gshd
ENSCJAG00000018844	DDX50	99	96.817	ENSCGRG00000015884	Ddx50	92	96.165	Cricetulus_griseus_crigri
ENSCJAG00000018844	DDX50	88	90.895	ENSDNOG00000001675	DDX50	100	90.895	Dasypus_novemcinctus
ENSCJAG00000018844	DDX50	100	97.286	ENSDORG00000007310	Ddx50	100	97.286	Dipodomys_ordii
ENSCJAG00000018844	DDX50	99	96.552	ENSETEG00000014069	DDX50	90	97.566	Echinops_telfairi
ENSCJAG00000018844	DDX50	100	97.693	ENSEASG00005015595	DDX50	99	97.693	Equus_asinus_asinus
ENSCJAG00000018844	DDX50	100	97.829	ENSECAG00000023044	DDX50	99	97.829	Equus_caballus
ENSCJAG00000018844	DDX50	99	93.899	ENSEEUG00000005782	DDX50	81	98.765	Erinaceus_europaeus
ENSCJAG00000018844	DDX50	100	98.374	ENSFCAG00000012678	DDX50	99	98.374	Felis_catus
ENSCJAG00000018844	DDX50	92	90.413	ENSFDAG00000016109	-	91	90.413	Fukomys_damarensis
ENSCJAG00000018844	DDX50	98	82.888	ENSGGOG00000041063	-	82	85.580	Gorilla_gorilla
ENSCJAG00000018844	DDX50	99	70.292	ENSGGOG00000022568	-	91	79.077	Gorilla_gorilla
ENSCJAG00000018844	DDX50	100	99.729	ENSGGOG00000010100	DDX50	100	99.729	Gorilla_gorilla
ENSCJAG00000018844	DDX50	99	97.878	ENSHGLG00000013466	DDX50	92	97.041	Heterocephalus_glaber_female
ENSCJAG00000018844	DDX50	99	97.878	ENSHGLG00100017191	DDX50	92	97.041	Heterocephalus_glaber_male
ENSCJAG00000018844	DDX50	82	88.298	ENSHGLG00100006568	-	92	88.298	Heterocephalus_glaber_male
ENSCJAG00000018844	DDX50	100	96.070	ENSSTOG00000021852	-	100	96.070	Ictidomys_tridecemlineatus
ENSCJAG00000018844	DDX50	99	97.082	ENSJJAG00000023928	-	92	94.985	Jaculus_jaculus
ENSCJAG00000018844	DDX50	99	79.003	ENSJJAG00000019626	-	91	74.286	Jaculus_jaculus
ENSCJAG00000018844	DDX50	100	97.965	ENSLAFG00000006186	DDX50	100	97.965	Loxodonta_africana
ENSCJAG00000018844	DDX50	94	84.680	ENSMFAG00000045339	-	89	89.342	Macaca_fascicularis
ENSCJAG00000018844	DDX50	100	100.000	ENSMFAG00000044067	DDX50	100	100.000	Macaca_fascicularis
ENSCJAG00000018844	DDX50	100	100.000	ENSMMUG00000001006	DDX50	100	100.000	Macaca_mulatta
ENSCJAG00000018844	DDX50	98	72.043	ENSMMUG00000045343	-	90	66.964	Macaca_mulatta
ENSCJAG00000018844	DDX50	91	74.277	ENSMNEG00000034754	-	89	73.538	Macaca_nemestrina
ENSCJAG00000018844	DDX50	94	85.515	ENSMNEG00000045530	-	89	90.596	Macaca_nemestrina
ENSCJAG00000018844	DDX50	92	93.068	ENSMNEG00000031664	DDX50	100	93.623	Macaca_nemestrina
ENSCJAG00000018844	DDX50	84	73.520	ENSMLEG00000041337	-	83	74.540	Mandrillus_leucophaeus
ENSCJAG00000018844	DDX50	100	98.100	ENSMLEG00000037313	DDX50	100	98.100	Mandrillus_leucophaeus
ENSCJAG00000018844	DDX50	99	78.989	ENSMLEG00000041988	-	89	88.114	Mandrillus_leucophaeus
ENSCJAG00000018844	DDX50	91	92.151	ENSMAUG00000011906	-	100	92.151	Mesocricetus_auratus
ENSCJAG00000018844	DDX50	56	94.673	ENSMAUG00000022192	Ddx50	100	94.673	Mesocricetus_auratus
ENSCJAG00000018844	DDX50	91	92.151	ENSMAUG00000000119	-	100	92.151	Mesocricetus_auratus
ENSCJAG00000018844	DDX50	99	97.878	ENSMICG00000017539	DDX50	100	90.909	Microcebus_murinus
ENSCJAG00000018844	DDX50	99	97.082	ENSMOCG00000001676	Ddx50	92	95.735	Microtus_ochrogaster
ENSCJAG00000018844	DDX50	92	80.205	ENSMODG00000010741	DDX50	92	80.612	Monodelphis_domestica
ENSCJAG00000018844	DDX50	99	97.082	MGP_CAROLIEiJ_G0015389	Ddx50	92	96.006	Mus_caroli
ENSCJAG00000018844	DDX50	99	97.347	ENSMUSG00000020076	Ddx50	92	95.575	Mus_musculus
ENSCJAG00000018844	DDX50	99	97.613	MGP_PahariEiJ_G0030805	Ddx50	92	95.723	Mus_pahari
ENSCJAG00000018844	DDX50	99	97.347	MGP_SPRETEiJ_G0016200	Ddx50	92	95.575	Mus_spretus
ENSCJAG00000018844	DDX50	88	97.222	ENSMPUG00000004589	DDX50	99	97.222	Mustela_putorius_furo
ENSCJAG00000018844	DDX50	100	96.472	ENSMLUG00000017590	DDX50	100	96.472	Myotis_lucifugus
ENSCJAG00000018844	DDX50	99	98.143	ENSNGAG00000004283	Ddx50	100	96.879	Nannospalax_galili
ENSCJAG00000018844	DDX50	100	99.864	ENSNLEG00000011631	DDX50	100	99.864	Nomascus_leucogenys
ENSCJAG00000018844	DDX50	95	74.795	ENSNLEG00000035506	-	88	78.505	Nomascus_leucogenys
ENSCJAG00000018844	DDX50	92	94.100	ENSOPRG00000001619	DDX50	92	94.838	Ochotona_princeps
ENSCJAG00000018844	DDX50	99	98.143	ENSODEG00000014597	-	100	96.608	Octodon_degus
ENSCJAG00000018844	DDX50	99	65.354	ENSOANG00000004776	DDX50	76	72.027	Ornithorhynchus_anatinus
ENSCJAG00000018844	DDX50	100	95.664	ENSOCUG00000002879	DDX50	100	95.664	Oryctolagus_cuniculus
ENSCJAG00000018844	DDX50	100	98.507	ENSOGAG00000001844	DDX50	100	98.507	Otolemur_garnettii
ENSCJAG00000018844	DDX50	100	97.286	ENSOARG00000005264	DDX50	99	97.286	Ovis_aries
ENSCJAG00000018844	DDX50	100	99.593	ENSPPAG00000040723	DDX50	100	99.593	Pan_paniscus
ENSCJAG00000018844	DDX50	94	83.427	ENSPPAG00000033902	-	87	84.639	Pan_paniscus
ENSCJAG00000018844	DDX50	100	70.235	ENSPPAG00000026788	-	90	79.128	Pan_paniscus
ENSCJAG00000018844	DDX50	100	98.374	ENSPPRG00000015826	DDX50	100	98.374	Panthera_pardus
ENSCJAG00000018844	DDX50	100	98.374	ENSPTIG00000008454	DDX50	100	98.374	Panthera_tigris_altaica
ENSCJAG00000018844	DDX50	100	70.235	ENSPTRG00000044913	-	99	72.368	Pan_troglodytes
ENSCJAG00000018844	DDX50	100	99.593	ENSPTRG00000002562	DDX50	100	99.593	Pan_troglodytes
ENSCJAG00000018844	DDX50	99	99.469	ENSPANG00000022143	-	92	92.183	Papio_anubis
ENSCJAG00000018844	DDX50	93	74.148	ENSPANG00000032548	-	89	74.154	Papio_anubis
ENSCJAG00000018844	DDX50	92	94.985	ENSPEMG00000020899	-	92	94.985	Peromyscus_maniculatus_bairdii
ENSCJAG00000018844	DDX50	92	80.000	ENSPCIG00000016036	DDX50	93	81.250	Phascolarctos_cinereus
ENSCJAG00000018844	DDX50	99	99.469	ENSPPYG00000002390	DDX50	100	99.851	Pongo_abelii
ENSCJAG00000018844	DDX50	84	84.253	ENSPCAG00000009692	DDX50	100	84.253	Procavia_capensis
ENSCJAG00000018844	DDX50	97	79.730	ENSPCOG00000012574	DDX50	91	96.970	Propithecus_coquereli
ENSCJAG00000018844	DDX50	86	96.419	ENSPVAG00000009519	DDX50	86	96.419	Pteropus_vampyrus
ENSCJAG00000018844	DDX50	100	97.632	ENSRNOG00000000396	Ddx50	100	97.632	Rattus_norvegicus
ENSCJAG00000018844	DDX50	99	75.198	ENSRBIG00000036573	-	92	69.139	Rhinopithecus_bieti
ENSCJAG00000018844	DDX50	99	75.000	ENSRBIG00000039673	-	90	67.841	Rhinopithecus_bieti
ENSCJAG00000018844	DDX50	87	98.134	ENSRBIG00000042841	-	98	99.313	Rhinopithecus_bieti
ENSCJAG00000018844	DDX50	99	73.545	ENSRROG00000022853	-	91	66.322	Rhinopithecus_roxellana
ENSCJAG00000018844	DDX50	99	70.745	ENSRROG00000031940	-	87	75.692	Rhinopithecus_roxellana
ENSCJAG00000018844	DDX50	100	99.729	ENSRROG00000032158	DDX50	100	99.729	Rhinopithecus_roxellana
ENSCJAG00000018844	DDX50	100	89.145	ENSSBOG00000014441	DDX50	100	89.145	Saimiri_boliviensis_boliviensis
ENSCJAG00000018844	DDX50	83	86.709	ENSSHAG00000005690	DDX50	91	81.212	Sarcophilus_harrisii
ENSCJAG00000018844	DDX50	84	65.306	ENSSHAG00000005334	-	80	67.657	Sarcophilus_harrisii
ENSCJAG00000018844	DDX50	100	80.461	ENSSARG00000013553	DDX50	88	88.217	Sorex_araneus
ENSCJAG00000018844	DDX50	100	96.472	ENSSSCG00000010246	DDX50	99	96.472	Sus_scrofa
ENSCJAG00000018844	DDX50	96	75.809	ENSTBEG00000001085	DDX50	92	75.516	Tupaia_belangeri
ENSCJAG00000018844	DDX50	99	96.552	ENSTTRG00000012408	DDX50	99	91.452	Tursiops_truncatus
ENSCJAG00000018844	DDX50	100	97.832	ENSUAMG00000010976	DDX50	99	98.976	Ursus_americanus
ENSCJAG00000018844	DDX50	100	97.832	ENSUMAG00000007726	DDX50	99	97.832	Ursus_maritimus
ENSCJAG00000018844	DDX50	99	98.674	ENSVPAG00000000626	DDX50	100	97.286	Vicugna_pacos
ENSCJAG00000018844	DDX50	100	98.947	ENSVVUG00000020366	DDX50	100	98.947	Vulpes_vulpes