EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000018937 (Gene tree)
Gene ID: 100401748
Gene Symbol: RNF17
Alias: FLJ11045|Mmip-2|SPATA23|TDRD4
Full Name: ring finger protein 17
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 103902 bases
Position: chrNTIC01034389.1:145270139-145374040
Accession: 10060
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000035173	TUDOR	PF00567.24	1.1e-81	1	5
ENSCJAP00000035173	TUDOR	PF00567.24	1.1e-81	2	5
ENSCJAP00000035173	TUDOR	PF00567.24	1.1e-81	3	5
ENSCJAP00000035173	TUDOR	PF00567.24	1.1e-81	4	5
ENSCJAP00000035173	TUDOR	PF00567.24	1.1e-81	5	5
ENSCJAP00000035167	TUDOR	PF00567.24	3.4e-48	1	3
ENSCJAP00000035167	TUDOR	PF00567.24	3.4e-48	2	3
ENSCJAP00000035167	TUDOR	PF00567.24	3.4e-48	3	3
ENSCJAP00000045749	TUDOR	PF00567.24	4.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000037139	RNF17-201	4851	-	ENSCJAP00000035173	1616 (aa)	-	F7HPA6
ENSCJAT00000037133	RNF17-202	1884	-	ENSCJAP00000035167	627 (aa)	-	F7HUP2
ENSCJAT00000057670	RNF17-203	1965	-	ENSCJAP00000045749	654 (aa)	-	F6SSE7

Gene Model

Click here to download ENSCJAG00000018937's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000018937's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000018937	RNF17	100	92.891	ENSG00000132972	RNF17	100	92.891	Homo_sapiens
ENSCJAG00000018937	RNF17	83	35.540	ENSAPOG00000017034	rnf17	75	35.222	Acanthochromis_polyacanthus
ENSCJAG00000018937	RNF17	100	81.034	ENSAMEG00000017340	RNF17	100	81.034	Ailuropoda_melanoleuca
ENSCJAG00000018937	RNF17	98	36.446	ENSAOCG00000018283	rnf17	98	32.141	Amphiprion_ocellaris
ENSCJAG00000018937	RNF17	98	36.098	ENSAPEG00000022338	rnf17	86	33.785	Amphiprion_percula
ENSCJAG00000018937	RNF17	84	36.979	ENSATEG00000002067	rnf17	78	35.909	Anabas_testudineus
ENSCJAG00000018937	RNF17	100	48.584	ENSAPLG00000003969	RNF17	100	47.587	Anas_platyrhynchos
ENSCJAG00000018937	RNF17	99	48.000	ENSACAG00000001418	RNF17	93	44.954	Anolis_carolinensis
ENSCJAG00000018937	RNF17	95	81.924	ENSANAG00000029969	RNF17	96	82.090	Aotus_nancymaae
ENSCJAG00000018937	RNF17	99	35.693	ENSACLG00000018279	rnf17	74	34.244	Astatotilapia_calliptera
ENSCJAG00000018937	RNF17	99	36.541	ENSAMXG00000011002	rnf17	84	32.949	Astyanax_mexicanus
ENSCJAG00000018937	RNF17	100	83.254	ENSBTAG00000000278	RNF17	100	83.254	Bos_taurus
ENSCJAG00000018937	RNF17	98	80.100	ENSCAFG00000007418	RNF17	100	80.769	Canis_familiaris
ENSCJAG00000018937	RNF17	100	82.622	ENSCAFG00020002919	-	100	82.464	Canis_lupus_dingo
ENSCJAG00000018937	RNF17	100	82.306	ENSCHIG00000026716	RNF17	100	82.306	Capra_hircus
ENSCJAG00000018937	RNF17	100	81.417	ENSTSYG00000000365	RNF17	99	81.417	Carlito_syrichta
ENSCJAG00000018937	RNF17	100	58.502	ENSCAPG00000012908	RNF17	99	65.289	Cavia_aperea
ENSCJAG00000018937	RNF17	100	95.735	ENSCCAG00000026725	RNF17	99	95.735	Cebus_capucinus
ENSCJAG00000018937	RNF17	100	93.365	ENSCATG00000040352	RNF17	100	93.365	Cercocebus_atys
ENSCJAG00000018937	RNF17	100	74.815	ENSCLAG00000004127	RNF17	100	73.671	Chinchilla_lanigera
ENSCJAG00000018937	RNF17	100	90.517	ENSCSAG00000018019	RNF17	100	90.517	Chlorocebus_sabaeus
ENSCJAG00000018937	RNF17	90	78.390	ENSCHOG00000013310	RNF17	90	77.533	Choloepus_hoffmanni
ENSCJAG00000018937	RNF17	100	55.687	ENSCPBG00000020920	RNF17	97	56.324	Chrysemys_picta_bellii
ENSCJAG00000018937	RNF17	99	93.038	ENSCANG00000032927	RNF17	99	93.038	Colobus_angolensis_palliatus
ENSCJAG00000018937	RNF17	100	73.519	ENSCGRG00001022658	Rnf17	100	73.519	Cricetulus_griseus_chok1gshd
ENSCJAG00000018937	RNF17	100	73.519	ENSCGRG00000009924	Rnf17	100	73.519	Cricetulus_griseus_crigri
ENSCJAG00000018937	RNF17	98	34.069	ENSCSEG00000008626	rnf17	96	30.379	Cynoglossus_semilaevis
ENSCJAG00000018937	RNF17	72	40.580	ENSCVAG00000017008	rnf17	83	32.527	Cyprinodon_variegatus
ENSCJAG00000018937	RNF17	98	35.303	ENSDARG00000056387	rnf17	98	30.621	Danio_rerio
ENSCJAG00000018937	RNF17	100	79.704	ENSDNOG00000006115	RNF17	99	77.328	Dasypus_novemcinctus
ENSCJAG00000018937	RNF17	72	78.125	ENSETEG00000017874	-	73	78.125	Echinops_telfairi
ENSCJAG00000018937	RNF17	100	81.991	ENSEASG00005001421	-	99	89.785	Equus_asinus_asinus
ENSCJAG00000018937	RNF17	100	80.296	ENSECAG00000017152	RNF17	99	78.779	Equus_caballus
ENSCJAG00000018937	RNF17	93	57.496	ENSEEUG00000000332	RNF17	90	66.849	Erinaceus_europaeus
ENSCJAG00000018937	RNF17	99	39.349	ENSELUG00000005626	rnf17	98	32.418	Esox_lucius
ENSCJAG00000018937	RNF17	100	85.466	ENSFCAG00000004914	RNF17	100	85.466	Felis_catus
ENSCJAG00000018937	RNF17	100	46.861	ENSFALG00000008766	RNF17	91	51.537	Ficedula_albicollis
ENSCJAG00000018937	RNF17	100	73.313	ENSFDAG00000017857	RNF17	100	72.771	Fukomys_damarensis
ENSCJAG00000018937	RNF17	99	34.667	ENSFHEG00000014822	rnf17	99	31.187	Fundulus_heteroclitus
ENSCJAG00000018937	RNF17	88	38.393	ENSGMOG00000015560	-	100	34.875	Gadus_morhua
ENSCJAG00000018937	RNF17	100	48.438	ENSGALG00000045414	-	98	53.043	Gallus_gallus
ENSCJAG00000018937	RNF17	99	33.333	ENSGAFG00000004463	rnf17	89	32.600	Gambusia_affinis
ENSCJAG00000018937	RNF17	87	55.225	ENSGAGG00000016999	RNF17	90	55.515	Gopherus_agassizii
ENSCJAG00000018937	RNF17	100	93.365	ENSGGOG00000014491	RNF17	100	93.365	Gorilla_gorilla
ENSCJAG00000018937	RNF17	98	36.095	ENSHBUG00000003554	rnf17	74	34.486	Haplochromis_burtoni
ENSCJAG00000018937	RNF17	100	74.591	ENSHGLG00000007270	RNF17	100	73.792	Heterocephalus_glaber_female
ENSCJAG00000018937	RNF17	100	74.591	ENSHGLG00100017393	RNF17	100	73.792	Heterocephalus_glaber_male
ENSCJAG00000018937	RNF17	98	34.091	ENSHCOG00000017676	rnf17	78	43.478	Hippocampus_comes
ENSCJAG00000018937	RNF17	99	37.858	ENSIPUG00000001087	rnf17	80	35.691	Ictalurus_punctatus
ENSCJAG00000018937	RNF17	100	76.814	ENSSTOG00000011255	-	100	76.814	Ictidomys_tridecemlineatus
ENSCJAG00000018937	RNF17	100	74.031	ENSJJAG00000016584	Rnf17	100	74.031	Jaculus_jaculus
ENSCJAG00000018937	RNF17	99	35.901	ENSKMAG00000013403	rnf17	73	34.919	Kryptolebias_marmoratus
ENSCJAG00000018937	RNF17	83	33.681	ENSLBEG00000014910	rnf17	73	33.772	Labrus_bergylta
ENSCJAG00000018937	RNF17	70	52.344	ENSLACG00000000323	RNF17	99	48.116	Latimeria_chalumnae
ENSCJAG00000018937	RNF17	99	36.541	ENSLOCG00000010768	rnf17	98	30.736	Lepisosteus_oculatus
ENSCJAG00000018937	RNF17	100	93.523	ENSMFAG00000032388	RNF17	100	93.523	Macaca_fascicularis
ENSCJAG00000018937	RNF17	100	93.523	ENSMMUG00000014610	RNF17	100	93.523	Macaca_mulatta
ENSCJAG00000018937	RNF17	100	93.365	ENSMNEG00000011234	RNF17	100	93.365	Macaca_nemestrina
ENSCJAG00000018937	RNF17	100	90.738	ENSMLEG00000030227	RNF17	100	90.271	Mandrillus_leucophaeus
ENSCJAG00000018937	RNF17	99	35.464	ENSMAMG00000020403	rnf17	87	33.969	Mastacembelus_armatus
ENSCJAG00000018937	RNF17	99	35.693	ENSMZEG00005019166	rnf17	88	34.325	Maylandia_zebra
ENSCJAG00000018937	RNF17	100	46.805	ENSMGAG00000015138	RNF17	96	51.117	Meleagris_gallopavo
ENSCJAG00000018937	RNF17	100	72.255	ENSMAUG00000004788	Rnf17	99	71.289	Mesocricetus_auratus
ENSCJAG00000018937	RNF17	100	84.360	ENSMICG00000010364	RNF17	100	84.360	Microcebus_murinus
ENSCJAG00000018937	RNF17	100	72.065	ENSMOCG00000011818	-	100	77.408	Microtus_ochrogaster
ENSCJAG00000018937	RNF17	98	33.493	ENSMMOG00000019514	rnf17	81	42.446	Mola_mola
ENSCJAG00000018937	RNF17	100	66.766	ENSMODG00000007827	RNF17	98	65.545	Monodelphis_domestica
ENSCJAG00000018937	RNF17	82	37.011	ENSMALG00000016943	rnf17	75	35.580	Monopterus_albus
ENSCJAG00000018937	RNF17	100	73.481	MGP_CAROLIEiJ_G0019337	Rnf17	100	72.854	Mus_caroli
ENSCJAG00000018937	RNF17	100	72.889	ENSMUSG00000000365	Rnf17	100	72.551	Mus_musculus
ENSCJAG00000018937	RNF17	100	73.185	MGP_PahariEiJ_G0030355	Rnf17	100	72.612	Mus_pahari
ENSCJAG00000018937	RNF17	100	72.889	MGP_SPRETEiJ_G0020228	Rnf17	100	72.612	Mus_spretus
ENSCJAG00000018937	RNF17	100	80.603	ENSMPUG00000013305	RNF17	100	80.603	Mustela_putorius_furo
ENSCJAG00000018937	RNF17	100	80.258	ENSMLUG00000003903	RNF17	100	80.258	Myotis_lucifugus
ENSCJAG00000018937	RNF17	100	73.778	ENSNGAG00000013553	Rnf17	100	73.426	Nannospalax_galili
ENSCJAG00000018937	RNF17	99	35.627	ENSNBRG00000012006	rnf17	82	36.415	Neolamprologus_brichardi
ENSCJAG00000018937	RNF17	100	92.381	ENSNLEG00000013780	RNF17	100	92.381	Nomascus_leucogenys
ENSCJAG00000018937	RNF17	77	58.929	ENSMEUG00000003276	-	60	65.470	Notamacropus_eugenii
ENSCJAG00000018937	RNF17	88	68.750	ENSOPRG00000016743	-	90	68.750	Ochotona_princeps
ENSCJAG00000018937	RNF17	100	73.460	ENSODEG00000005443	-	100	73.101	Octodon_degus
ENSCJAG00000018937	RNF17	99	34.795	ENSONIG00000015746	rnf17	99	34.302	Oreochromis_niloticus
ENSCJAG00000018937	RNF17	100	76.296	ENSOCUG00000007384	RNF17	100	75.891	Oryctolagus_cuniculus
ENSCJAG00000018937	RNF17	98	37.366	ENSORLG00000012818	rnf17	84	35.621	Oryzias_latipes
ENSCJAG00000018937	RNF17	98	37.519	ENSORLG00020009879	-	75	35.662	Oryzias_latipes_hni
ENSCJAG00000018937	RNF17	98	37.366	ENSORLG00015013027	-	98	31.303	Oryzias_latipes_hsok
ENSCJAG00000018937	RNF17	85	36.661	ENSOMEG00000009891	rnf17	85	33.998	Oryzias_melastigma
ENSCJAG00000018937	RNF17	100	79.202	ENSOGAG00000014803	RNF17	100	79.202	Otolemur_garnettii
ENSCJAG00000018937	RNF17	100	77.151	ENSOARG00000014641	RNF17	99	74.938	Ovis_aries
ENSCJAG00000018937	RNF17	100	93.492	ENSPPAG00000028779	RNF17	100	93.492	Pan_paniscus
ENSCJAG00000018937	RNF17	100	84.834	ENSPPRG00000009230	RNF17	100	84.834	Panthera_pardus
ENSCJAG00000018937	RNF17	100	84.992	ENSPTIG00000001738	RNF17	100	84.992	Panthera_tigris_altaica
ENSCJAG00000018937	RNF17	100	93.333	ENSPTRG00000005713	RNF17	100	93.333	Pan_troglodytes
ENSCJAG00000018937	RNF17	100	93.365	ENSPANG00000007640	RNF17	100	93.365	Papio_anubis
ENSCJAG00000018937	RNF17	99	35.940	ENSPKIG00000001648	rnf17	90	36.446	Paramormyrops_kingsleyae
ENSCJAG00000018937	RNF17	100	54.786	ENSPSIG00000011245	RNF17	100	60.755	Pelodiscus_sinensis
ENSCJAG00000018937	RNF17	100	74.002	ENSPEMG00000008693	Rnf17	100	74.002	Peromyscus_maniculatus_bairdii
ENSCJAG00000018937	RNF17	83	67.876	ENSPCIG00000009190	-	92	69.503	Phascolarctos_cinereus
ENSCJAG00000018937	RNF17	98	35.111	ENSPFOG00000007124	rnf17	74	34.111	Poecilia_formosa
ENSCJAG00000018937	RNF17	98	35.445	ENSPLAG00000006198	rnf17	98	30.746	Poecilia_latipinna
ENSCJAG00000018937	RNF17	98	35.650	ENSPMEG00000022432	rnf17	96	30.247	Poecilia_mexicana
ENSCJAG00000018937	RNF17	98	34.309	ENSPREG00000001414	rnf17	82	33.142	Poecilia_reticulata
ENSCJAG00000018937	RNF17	100	91.010	ENSPPYG00000005215	RNF17	100	91.010	Pongo_abelii
ENSCJAG00000018937	RNF17	74	84.211	ENSPCAG00000002665	RNF17	76	84.211	Procavia_capensis
ENSCJAG00000018937	RNF17	100	60.559	ENSPCOG00000020211	RNF17	95	65.872	Propithecus_coquereli
ENSCJAG00000018937	RNF17	97	78.571	ENSPVAG00000013021	RNF17	97	78.571	Pteropus_vampyrus
ENSCJAG00000018937	RNF17	99	36.006	ENSPNAG00000027505	rnf17	85	35.650	Pygocentrus_nattereri
ENSCJAG00000018937	RNF17	100	73.778	ENSRNOG00000008059	Rnf17	100	72.310	Rattus_norvegicus
ENSCJAG00000018937	RNF17	100	92.891	ENSRBIG00000027010	RNF17	100	85.490	Rhinopithecus_bieti
ENSCJAG00000018937	RNF17	100	92.891	ENSRROG00000022801	RNF17	100	92.891	Rhinopithecus_roxellana
ENSCJAG00000018937	RNF17	100	95.735	ENSSBOG00000021661	RNF17	99	95.735	Saimiri_boliviensis_boliviensis
ENSCJAG00000018937	RNF17	100	66.071	ENSSHAG00000005609	RNF17	99	65.382	Sarcophilus_harrisii
ENSCJAG00000018937	RNF17	99	36.551	ENSSFOG00015023037	rnf17	89	44.944	Scleropages_formosus
ENSCJAG00000018937	RNF17	82	34.729	ENSSMAG00000007429	rnf17	73	34.372	Scophthalmus_maximus
ENSCJAG00000018937	RNF17	83	34.501	ENSSDUG00000013530	rnf17	77	34.672	Seriola_dumerili
ENSCJAG00000018937	RNF17	83	34.851	ENSSLDG00000019577	rnf17	75	35.092	Seriola_lalandi_dorsalis
ENSCJAG00000018937	RNF17	100	70.400	ENSSARG00000003016	RNF17	94	70.400	Sorex_araneus
ENSCJAG00000018937	RNF17	98	54.294	ENSSPUG00000008917	RNF17	87	58.188	Sphenodon_punctatus
ENSCJAG00000018937	RNF17	79	34.539	ENSSPAG00000001925	rnf17	76	34.144	Stegastes_partitus
ENSCJAG00000018937	RNF17	100	76.444	ENSSSCG00000009572	RNF17	100	76.727	Sus_scrofa
ENSCJAG00000018937	RNF17	52	54.335	ENSTGUG00000011267	-	100	54.335	Taeniopygia_guttata
ENSCJAG00000018937	RNF17	63	48.798	ENSTGUG00000011272	-	100	52.174	Taeniopygia_guttata
ENSCJAG00000018937	RNF17	98	33.333	ENSTRUG00000015498	rnf17	58	33.181	Takifugu_rubripes
ENSCJAG00000018937	RNF17	98	36.697	ENSTNIG00000015681	rnf17	100	35.124	Tetraodon_nigroviridis
ENSCJAG00000018937	RNF17	100	77.596	ENSTBEG00000000282	RNF17	100	63.347	Tupaia_belangeri
ENSCJAG00000018937	RNF17	95	76.744	ENSTTRG00000012698	RNF17	99	72.136	Tursiops_truncatus
ENSCJAG00000018937	RNF17	100	83.254	ENSUMAG00000013953	-	100	83.096	Ursus_maritimus
ENSCJAG00000018937	RNF17	83	88.889	ENSVPAG00000011388	RNF17	85	88.889	Vicugna_pacos
ENSCJAG00000018937	RNF17	100	80.480	ENSVVUG00000006226	RNF17	100	80.480	Vulpes_vulpes
ENSCJAG00000018937	RNF17	100	44.961	ENSXETG00000034020	RNF17	100	44.961	Xenopus_tropicalis
ENSCJAG00000018937	RNF17	84	34.039	ENSXCOG00000018295	rnf17	77	34.067	Xiphophorus_couchianus
ENSCJAG00000018937	RNF17	84	33.735	ENSXMAG00000014747	rnf17	77	34.331	Xiphophorus_maculatus