EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000019385 (Gene tree)
Gene ID: 100410421
Gene Symbol: RBM47
Alias: FLJ20273|NET18
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 121102 bases
Position: chrNTIC01033278.1:122679616-122800717
Accession: 100410421
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000036000	RRM_1	PF00076.22	1e-38	1	3
ENSCJAP00000036000	RRM_1	PF00076.22	1e-38	2	3
ENSCJAP00000036000	RRM_1	PF00076.22	1e-38	3	3
ENSCJAP00000036003	RRM_1	PF00076.22	3.3e-38	1	3
ENSCJAP00000036003	RRM_1	PF00076.22	3.3e-38	2	3
ENSCJAP00000036003	RRM_1	PF00076.22	3.3e-38	3	3
ENSCJAP00000036012	RRM_1	PF00076.22	5.1e-38	1	3
ENSCJAP00000036012	RRM_1	PF00076.22	5.1e-38	2	3
ENSCJAP00000036012	RRM_1	PF00076.22	5.1e-38	3	3
ENSCJAP00000056260	RRM_1	PF00076.22	5.2e-38	1	3
ENSCJAP00000056260	RRM_1	PF00076.22	5.2e-38	2	3
ENSCJAP00000056260	RRM_1	PF00076.22	5.2e-38	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000071548	RBM47-201	6183	-	ENSCJAP00000056260	594 (aa)	XP_002745942	U3BG53
ENSCJAT00000038015	RBM47-204	1182	-	ENSCJAP00000036000	393 (aa)	-	F7GYW0
ENSCJAT00000038018	RBM47-203	1578	-	ENSCJAP00000036003	525 (aa)	-	F7GYU2
ENSCJAT00000038028	RBM47-202	1770	-	ENSCJAP00000036012	589 (aa)	-	F7GTT2

Gene Model

Click here to download ENSCJAG00000019385's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000019385's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000019385	RBM47	52	42.439	ENSCJAG00000016345	DND1	58	42.439
ENSCJAG00000019385	RBM47	76	74.333	ENSCJAG00000001768	RBM46	64	74.333
ENSCJAG00000019385	RBM47	80	54.747	ENSCJAG00000015352	SYNCRIP	76	55.652
ENSCJAG00000019385	RBM47	87	68.588	ENSCJAG00000005045	A1CF	75	58.901
ENSCJAG00000019385	RBM47	81	54.601	ENSCJAG00000005512	HNRNPR	71	45.534

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000019385	RBM47	100	98.476	ENSG00000163694	RBM47	100	98.741	Homo_sapiens
ENSCJAG00000019385	RBM47	100	84.267	ENSAPOG00000011062	rbm47	98	83.978	Acanthochromis_polyacanthus
ENSCJAG00000019385	RBM47	100	95.973	ENSAMEG00000009672	RBM47	100	95.973	Ailuropoda_melanoleuca
ENSCJAG00000019385	RBM47	100	84.800	ENSACIG00000011531	rbm47	98	84.530	Amphilophus_citrinellus
ENSCJAG00000019385	RBM47	100	81.330	ENSAOCG00000022245	rbm47	98	84.444	Amphiprion_ocellaris
ENSCJAG00000019385	RBM47	100	81.330	ENSAPEG00000018304	rbm47	98	84.444	Amphiprion_percula
ENSCJAG00000019385	RBM47	100	82.519	ENSATEG00000018400	rbm47	94	85.915	Anabas_testudineus
ENSCJAG00000019385	RBM47	100	88.107	ENSAPLG00000013974	RBM47	100	87.858	Anas_platyrhynchos
ENSCJAG00000019385	RBM47	100	86.356	ENSACAG00000011833	RBM47	96	87.197	Anolis_carolinensis
ENSCJAG00000019385	RBM47	100	99.327	ENSANAG00000029440	RBM47	100	99.327	Aotus_nancymaae
ENSCJAG00000019385	RBM47	100	82.429	ENSACLG00000016902	rbm47	95	85.915	Astatotilapia_calliptera
ENSCJAG00000019385	RBM47	98	79.699	ENSAMXG00000021794	rbm47	95	83.149	Astyanax_mexicanus
ENSCJAG00000019385	RBM47	100	96.812	ENSBTAG00000002356	RBM47	100	96.812	Bos_taurus
ENSCJAG00000019385	RBM47	96	92.670	ENSCAFG00000015898	RBM47	100	92.965	Canis_familiaris
ENSCJAG00000019385	RBM47	90	94.051	ENSCAFG00020010558	RBM47	94	94.164	Canis_lupus_dingo
ENSCJAG00000019385	RBM47	100	96.812	ENSCHIG00000026214	RBM47	100	96.812	Capra_hircus
ENSCJAG00000019385	RBM47	90	84.146	ENSTSYG00000033612	RBM47	93	89.381	Carlito_syrichta
ENSCJAG00000019385	RBM47	100	86.993	ENSCAPG00000008426	RBM47	100	87.416	Cavia_aperea
ENSCJAG00000019385	RBM47	100	96.000	ENSCPOG00000014100	RBM47	100	93.960	Cavia_porcellus
ENSCJAG00000019385	RBM47	100	99.327	ENSCCAG00000030129	-	100	99.327	Cebus_capucinus
ENSCJAG00000019385	RBM47	99	69.088	ENSCCAG00000024397	-	99	68.412	Cebus_capucinus
ENSCJAG00000019385	RBM47	100	98.667	ENSCATG00000042064	RBM47	100	98.667	Cercocebus_atys
ENSCJAG00000019385	RBM47	100	95.467	ENSCLAG00000001684	RBM47	100	93.909	Chinchilla_lanigera
ENSCJAG00000019385	RBM47	100	98.485	ENSCSAG00000017060	RBM47	100	98.485	Chlorocebus_sabaeus
ENSCJAG00000019385	RBM47	87	97.093	ENSCHOG00000011731	RBM47	88	93.671	Choloepus_hoffmanni
ENSCJAG00000019385	RBM47	100	92.553	ENSCPBG00000013831	RBM47	100	89.933	Chrysemys_picta_bellii
ENSCJAG00000019385	RBM47	100	98.476	ENSCANG00000019997	RBM47	100	98.476	Colobus_angolensis_palliatus
ENSCJAG00000019385	RBM47	100	94.180	ENSCGRG00001000623	-	100	93.456	Cricetulus_griseus_chok1gshd
ENSCJAG00000019385	RBM47	100	87.713	ENSCGRG00001020102	-	100	87.524	Cricetulus_griseus_chok1gshd
ENSCJAG00000019385	RBM47	100	87.335	ENSCGRG00000014760	-	100	87.146	Cricetulus_griseus_crigri
ENSCJAG00000019385	RBM47	100	93.651	ENSCGRG00000007762	-	100	94.304	Cricetulus_griseus_crigri
ENSCJAG00000019385	RBM47	95	82.540	ENSCSEG00000004545	rbm47	98	75.129	Cynoglossus_semilaevis
ENSCJAG00000019385	RBM47	98	83.607	ENSCVAG00000020144	rbm47	98	84.298	Cyprinodon_variegatus
ENSCJAG00000019385	RBM47	98	80.702	ENSDARG00000061985	rbm47	95	78.087	Danio_rerio
ENSCJAG00000019385	RBM47	100	92.386	ENSDNOG00000046854	RBM47	100	94.247	Dasypus_novemcinctus
ENSCJAG00000019385	RBM47	100	93.990	ENSDORG00000010144	Rbm47	100	94.157	Dipodomys_ordii
ENSCJAG00000019385	RBM47	100	93.489	ENSETEG00000009194	RBM47	100	94.324	Echinops_telfairi
ENSCJAG00000019385	RBM47	95	71.429	ENSEBUG00000011912	rbm47	95	75.434	Eptatretus_burgeri
ENSCJAG00000019385	RBM47	100	96.309	ENSEASG00005008443	RBM47	100	96.309	Equus_asinus_asinus
ENSCJAG00000019385	RBM47	100	96.309	ENSECAG00000004400	RBM47	100	96.309	Equus_caballus
ENSCJAG00000019385	RBM47	76	95.671	ENSEEUG00000001194	RBM47	75	95.671	Erinaceus_europaeus
ENSCJAG00000019385	RBM47	100	80.506	ENSELUG00000006148	rbm47	93	84.958	Esox_lucius
ENSCJAG00000019385	RBM47	100	95.966	ENSFCAG00000012399	RBM47	100	95.966	Felis_catus
ENSCJAG00000019385	RBM47	100	89.799	ENSFALG00000002861	RBM47	100	90.803	Ficedula_albicollis
ENSCJAG00000019385	RBM47	100	94.133	ENSFDAG00000016326	RBM47	100	92.724	Fukomys_damarensis
ENSCJAG00000019385	RBM47	96	86.761	ENSFHEG00000007938	rbm47	97	76.696	Fundulus_heteroclitus
ENSCJAG00000019385	RBM47	100	80.759	ENSGMOG00000014802	rbm47	94	84.078	Gadus_morhua
ENSCJAG00000019385	RBM47	95	90.691	ENSGALG00000014267	RBM47	99	92.553	Gallus_gallus
ENSCJAG00000019385	RBM47	96	82.632	ENSGAFG00000020571	rbm47	93	85.352	Gambusia_affinis
ENSCJAG00000019385	RBM47	100	79.487	ENSGACG00000016223	rbm47	94	83.146	Gasterosteus_aculeatus
ENSCJAG00000019385	RBM47	100	90.436	ENSGAGG00000020051	RBM47	100	90.101	Gopherus_agassizii
ENSCJAG00000019385	RBM47	100	98.667	ENSGGOG00000001367	RBM47	100	98.667	Gorilla_gorilla
ENSCJAG00000019385	RBM47	100	82.429	ENSHBUG00000003520	rbm47	95	85.915	Haplochromis_burtoni
ENSCJAG00000019385	RBM47	100	74.335	ENSHGLG00000016914	RBM47	100	94.937	Heterocephalus_glaber_female
ENSCJAG00000019385	RBM47	100	89.333	ENSHGLG00100003071	-	100	83.220	Heterocephalus_glaber_male
ENSCJAG00000019385	RBM47	100	93.455	ENSHGLG00100014028	-	100	94.937	Heterocephalus_glaber_male
ENSCJAG00000019385	RBM47	95	84.574	ENSHCOG00000002074	rbm47	99	82.540	Hippocampus_comes
ENSCJAG00000019385	RBM47	100	81.347	ENSIPUG00000004743	rbm47	97	85.143	Ictalurus_punctatus
ENSCJAG00000019385	RBM47	100	96.395	ENSSTOG00000004727	RBM47	100	96.395	Ictidomys_tridecemlineatus
ENSCJAG00000019385	RBM47	100	93.369	ENSJJAG00000013823	Rbm47	100	93.300	Jaculus_jaculus
ENSCJAG00000019385	RBM47	100	80.916	ENSKMAG00000000084	rbm47	97	84.488	Kryptolebias_marmoratus
ENSCJAG00000019385	RBM47	100	80.256	ENSLBEG00000008436	rbm47	100	81.383	Labrus_bergylta
ENSCJAG00000019385	RBM47	100	87.766	ENSLACG00000007196	RBM47	100	84.148	Latimeria_chalumnae
ENSCJAG00000019385	RBM47	95	87.433	ENSLOCG00000012966	rbm47	95	85.372	Lepisosteus_oculatus
ENSCJAG00000019385	RBM47	100	94.631	ENSLAFG00000011998	RBM47	100	94.631	Loxodonta_africana
ENSCJAG00000019385	RBM47	100	98.667	ENSMFAG00000037967	RBM47	100	98.667	Macaca_fascicularis
ENSCJAG00000019385	RBM47	100	98.485	ENSMMUG00000012036	RBM47	100	98.485	Macaca_mulatta
ENSCJAG00000019385	RBM47	100	98.476	ENSMNEG00000040774	RBM47	100	98.476	Macaca_nemestrina
ENSCJAG00000019385	RBM47	100	98.730	ENSMLEG00000041432	RBM47	100	98.730	Mandrillus_leucophaeus
ENSCJAG00000019385	RBM47	100	82.732	ENSMAMG00000019143	rbm47	95	85.915	Mastacembelus_armatus
ENSCJAG00000019385	RBM47	100	82.429	ENSMZEG00005023659	rbm47	95	85.915	Maylandia_zebra
ENSCJAG00000019385	RBM47	100	90.682	ENSMGAG00000012226	RBM47	100	90.017	Meleagris_gallopavo
ENSCJAG00000019385	RBM47	100	93.635	ENSMAUG00000006493	Rbm47	100	94.304	Mesocricetus_auratus
ENSCJAG00000019385	RBM47	100	89.226	ENSMICG00000026417	RBM47	96	92.330	Microcebus_murinus
ENSCJAG00000019385	RBM47	100	93.960	ENSMOCG00000021170	Rbm47	100	94.937	Microtus_ochrogaster
ENSCJAG00000019385	RBM47	100	76.606	ENSMMOG00000007260	rbm47	95	83.708	Mola_mola
ENSCJAG00000019385	RBM47	100	81.980	ENSMODG00000020561	-	97	81.818	Monodelphis_domestica
ENSCJAG00000019385	RBM47	79	80.757	ENSMODG00000015426	-	99	78.233	Monodelphis_domestica
ENSCJAG00000019385	RBM47	100	92.267	ENSMODG00000007003	RBM47	100	90.756	Monodelphis_domestica
ENSCJAG00000019385	RBM47	100	80.513	ENSMALG00000005167	rbm47	98	85.319	Monopterus_albus
ENSCJAG00000019385	RBM47	100	94.180	MGP_CAROLIEiJ_G0027258	Rbm47	100	94.304	Mus_caroli
ENSCJAG00000019385	RBM47	100	93.624	ENSMUSG00000070780	Rbm47	100	94.304	Mus_musculus
ENSCJAG00000019385	RBM47	100	93.624	MGP_PahariEiJ_G0017040	Rbm47	100	94.937	Mus_pahari
ENSCJAG00000019385	RBM47	100	93.232	MGP_SPRETEiJ_G0028253	Rbm47	100	94.304	Mus_spretus
ENSCJAG00000019385	RBM47	100	96.303	ENSMPUG00000006177	RBM47	94	96.303	Mustela_putorius_furo
ENSCJAG00000019385	RBM47	100	92.965	ENSMLUG00000000889	RBM47	100	93.243	Myotis_lucifugus
ENSCJAG00000019385	RBM47	100	95.213	ENSNGAG00000003325	Rbm47	100	94.295	Nannospalax_galili
ENSCJAG00000019385	RBM47	100	82.946	ENSNBRG00000015092	rbm47	95	85.994	Neolamprologus_brichardi
ENSCJAG00000019385	RBM47	100	98.663	ENSNLEG00000017151	RBM47	100	98.286	Nomascus_leucogenys
ENSCJAG00000019385	RBM47	91	93.575	ENSMEUG00000009516	-	99	86.885	Notamacropus_eugenii
ENSCJAG00000019385	RBM47	85	96.667	ENSOPRG00000016507	-	71	96.667	Ochotona_princeps
ENSCJAG00000019385	RBM47	100	95.733	ENSODEG00000004873	RBM47	100	94.078	Octodon_degus
ENSCJAG00000019385	RBM47	100	81.538	ENSONIG00000009061	rbm47	94	85.154	Oreochromis_niloticus
ENSCJAG00000019385	RBM47	100	86.432	ENSOANG00000008978	RBM47	96	88.870	Ornithorhynchus_anatinus
ENSCJAG00000019385	RBM47	100	94.463	ENSOCUG00000012034	RBM47	97	95.113	Oryctolagus_cuniculus
ENSCJAG00000019385	RBM47	100	84.840	ENSORLG00000005847	rbm47	97	85.112	Oryzias_latipes
ENSCJAG00000019385	RBM47	100	84.840	ENSORLG00020005154	rbm47	97	85.112	Oryzias_latipes_hni
ENSCJAG00000019385	RBM47	100	85.106	ENSORLG00015000066	rbm47	97	85.393	Oryzias_latipes_hsok
ENSCJAG00000019385	RBM47	100	84.840	ENSOMEG00000010730	rbm47	97	85.393	Oryzias_melastigma
ENSCJAG00000019385	RBM47	100	96.975	ENSOGAG00000029367	-	100	96.975	Otolemur_garnettii
ENSCJAG00000019385	RBM47	100	86.780	ENSOGAG00000025193	-	100	86.949	Otolemur_garnettii
ENSCJAG00000019385	RBM47	100	93.421	ENSOARG00000012711	RBM47	100	88.275	Ovis_aries
ENSCJAG00000019385	RBM47	100	98.316	ENSPPAG00000029763	RBM47	100	98.316	Pan_paniscus
ENSCJAG00000019385	RBM47	100	92.941	ENSPPRG00000012873	RBM47	100	92.941	Panthera_pardus
ENSCJAG00000019385	RBM47	85	90.909	ENSPTIG00000017046	RBM47	100	91.700	Panthera_tigris_altaica
ENSCJAG00000019385	RBM47	100	98.667	ENSPTRG00000016006	RBM47	100	98.667	Pan_troglodytes
ENSCJAG00000019385	RBM47	100	98.667	ENSPANG00000005980	RBM47	100	98.667	Papio_anubis
ENSCJAG00000019385	RBM47	90	85.836	ENSPKIG00000005037	rbm47	95	84.507	Paramormyrops_kingsleyae
ENSCJAG00000019385	RBM47	97	81.061	ENSPKIG00000013431	RBM47	98	81.039	Paramormyrops_kingsleyae
ENSCJAG00000019385	RBM47	95	92.287	ENSPSIG00000017516	RBM47	97	90.720	Pelodiscus_sinensis
ENSCJAG00000019385	RBM47	95	83.690	ENSPMGG00000018540	rbm47	100	81.915	Periophthalmus_magnuspinnatus
ENSCJAG00000019385	RBM47	100	93.960	ENSPEMG00000011088	Rbm47	100	94.128	Peromyscus_maniculatus_bairdii
ENSCJAG00000019385	RBM47	91	86.111	ENSPFOG00000007997	rbm47	94	84.916	Poecilia_formosa
ENSCJAG00000019385	RBM47	95	83.511	ENSPLAG00000002072	rbm47	97	85.352	Poecilia_latipinna
ENSCJAG00000019385	RBM47	96	87.042	ENSPMEG00000017492	rbm47	97	85.634	Poecilia_mexicana
ENSCJAG00000019385	RBM47	96	87.042	ENSPREG00000008456	rbm47	97	85.634	Poecilia_reticulata
ENSCJAG00000019385	RBM47	98	85.831	ENSPPYG00000014688	RBM47	99	83.135	Pongo_abelii
ENSCJAG00000019385	RBM47	96	96.579	ENSPCAG00000011879	RBM47	81	97.000	Procavia_capensis
ENSCJAG00000019385	RBM47	100	91.933	ENSPCOG00000023451	RBM47	100	92.542	Propithecus_coquereli
ENSCJAG00000019385	RBM47	100	93.802	ENSPVAG00000003812	RBM47	100	94.640	Pteropus_vampyrus
ENSCJAG00000019385	RBM47	100	82.429	ENSPNYG00000022868	rbm47	95	85.434	Pundamilia_nyererei
ENSCJAG00000019385	RBM47	98	80.201	ENSPNAG00000007940	rbm47	96	83.747	Pygocentrus_nattereri
ENSCJAG00000019385	RBM47	100	93.289	ENSRNOG00000002408	Rbm47	100	93.624	Rattus_norvegicus
ENSCJAG00000019385	RBM47	100	98.476	ENSRBIG00000039601	RBM47	100	98.476	Rhinopithecus_bieti
ENSCJAG00000019385	RBM47	100	98.476	ENSRROG00000044696	RBM47	100	98.476	Rhinopithecus_roxellana
ENSCJAG00000019385	RBM47	99	98.201	ENSSBOG00000028475	RBM47	100	99.172	Saimiri_boliviensis_boliviensis
ENSCJAG00000019385	RBM47	100	92.533	ENSSHAG00000017576	RBM47	100	91.525	Sarcophilus_harrisii
ENSCJAG00000019385	RBM47	96	81.378	ENSSFOG00015012445	rbm47	95	83.889	Scleropages_formosus
ENSCJAG00000019385	RBM47	96	79.737	ENSSFOG00015024101	RBM47	97	75.606	Scleropages_formosus
ENSCJAG00000019385	RBM47	98	79.000	ENSSMAG00000009744	rbm47	93	83.662	Scophthalmus_maximus
ENSCJAG00000019385	RBM47	100	81.818	ENSSDUG00000022684	rbm47	100	82.540	Seriola_dumerili
ENSCJAG00000019385	RBM47	100	80.808	ENSSLDG00000003109	rbm47	97	85.434	Seriola_lalandi_dorsalis
ENSCJAG00000019385	RBM47	95	93.668	ENSSARG00000001735	RBM47	75	94.855	Sorex_araneus
ENSCJAG00000019385	RBM47	100	87.690	ENSSPUG00000007515	RBM47	100	90.909	Sphenodon_punctatus
ENSCJAG00000019385	RBM47	100	82.353	ENSSPAG00000001257	rbm47	98	84.807	Stegastes_partitus
ENSCJAG00000019385	RBM47	100	96.309	ENSSSCG00000008796	RBM47	100	96.309	Sus_scrofa
ENSCJAG00000019385	RBM47	100	89.130	ENSTGUG00000008705	RBM47	100	90.236	Taeniopygia_guttata
ENSCJAG00000019385	RBM47	93	84.384	ENSTRUG00000014050	rbm47	99	84.123	Takifugu_rubripes
ENSCJAG00000019385	RBM47	100	82.171	ENSTNIG00000006127	rbm47	94	77.661	Tetraodon_nigroviridis
ENSCJAG00000019385	RBM47	95	90.909	ENSTBEG00000001607	RBM47	76	91.139	Tupaia_belangeri
ENSCJAG00000019385	RBM47	100	95.470	ENSTTRG00000002839	RBM47	100	95.470	Tursiops_truncatus
ENSCJAG00000019385	RBM47	100	96.134	ENSUAMG00000021346	RBM47	100	96.134	Ursus_americanus
ENSCJAG00000019385	RBM47	57	95.890	ENSVPAG00000000641	-	57	95.890	Vicugna_pacos
ENSCJAG00000019385	RBM47	96	93.892	ENSVVUG00000014774	RBM47	100	93.243	Vulpes_vulpes
ENSCJAG00000019385	RBM47	100	84.654	ENSXETG00000012802	rbm47	100	84.654	Xenopus_tropicalis
ENSCJAG00000019385	RBM47	95	83.245	ENSXCOG00000000780	rbm47	97	85.070	Xiphophorus_couchianus
ENSCJAG00000019385	RBM47	100	83.245	ENSXMAG00000009874	rbm47	97	84.594	Xiphophorus_maculatus