EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000019431 (Gene tree)
Gene ID: 100397391
Gene Symbol: TNRC6C
Alias: FLJ20015|KIAA1582
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 94248 bases
Position: chrNTIC01034389.1:155401707-155495954
Accession: 29318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000036098	Ago_hook	PF10427.9	9e-22	1	1
ENSCJAP00000036108	Ago_hook	PF10427.9	9.9e-22	1	1
ENSCJAP00000036107	Ago_hook	PF10427.9	1.1e-21	1	1
ENSCJAP00000036098	RRM_1	PF00076.22	0.00031	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000038131	TNRC6C-202	5802	-	ENSCJAP00000036108	1933 (aa)	-	F7DRT8
ENSCJAT00000038130	TNRC6C-201	5829	-	ENSCJAP00000036107	1942 (aa)	-	F7E676
ENSCJAT00000038121	TNRC6C-203	5067	-	ENSCJAP00000036098	1688 (aa)	-	F7FBA7

Gene Model

Click here to download ENSCJAG00000019431's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000019431's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000019431	TNRC6C	83	49.161	ENSCJAG00000002732	TNRC6B	99	51.087
ENSCJAG00000019431	TNRC6C	99	42.579	ENSCJAG00000020677	TNRC6A	92	49.629

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000019431	TNRC6C	100	98.251	ENSG00000078687	TNRC6C	100	98.947	Homo_sapiens
ENSCJAG00000019431	TNRC6C	80	54.390	ENSAPOG00000019749	tnrc6c1	98	48.869	Acanthochromis_polyacanthus
ENSCJAG00000019431	TNRC6C	100	87.128	ENSAMEG00000013756	TNRC6C	99	88.682	Ailuropoda_melanoleuca
ENSCJAG00000019431	TNRC6C	91	52.541	ENSACIG00000008075	tnrc6c1	98	54.067	Amphilophus_citrinellus
ENSCJAG00000019431	TNRC6C	77	68.640	ENSAOCG00000023968	tnrc6c1	99	48.901	Amphiprion_ocellaris
ENSCJAG00000019431	TNRC6C	80	54.354	ENSAPEG00000009020	tnrc6c1	99	48.799	Amphiprion_percula
ENSCJAG00000019431	TNRC6C	99	86.047	ENSAPLG00000005456	TNRC6C	100	85.958	Anas_platyrhynchos
ENSCJAG00000019431	TNRC6C	99	86.615	ENSACAG00000016198	TNRC6C	98	86.302	Anolis_carolinensis
ENSCJAG00000019431	TNRC6C	100	98.919	ENSANAG00000021554	TNRC6C	100	98.919	Aotus_nancymaae
ENSCJAG00000019431	TNRC6C	93	48.207	ENSACLG00000000424	tnrc6c1	99	48.528	Astatotilapia_calliptera
ENSCJAG00000019431	TNRC6C	100	87.183	ENSBTAG00000018658	TNRC6C	100	87.596	Bos_taurus
ENSCJAG00000019431	TNRC6C	99	90.739	ENSCAFG00000005224	TNRC6C	99	90.739	Canis_familiaris
ENSCJAG00000019431	TNRC6C	100	90.642	ENSCAFG00020006661	TNRC6C	99	91.132	Canis_lupus_dingo
ENSCJAG00000019431	TNRC6C	100	86.805	ENSCHIG00000026004	TNRC6C	100	85.529	Capra_hircus
ENSCJAG00000019431	TNRC6C	100	93.171	ENSTSYG00000005403	TNRC6C	100	95.211	Carlito_syrichta
ENSCJAG00000019431	TNRC6C	100	84.235	ENSCAPG00000007307	TNRC6C	99	83.447	Cavia_aperea
ENSCJAG00000019431	TNRC6C	100	89.698	ENSCPOG00000000467	TNRC6C	100	87.773	Cavia_porcellus
ENSCJAG00000019431	TNRC6C	100	98.993	ENSCCAG00000030524	TNRC6C	100	98.993	Cebus_capucinus
ENSCJAG00000019431	TNRC6C	100	97.987	ENSCATG00000033135	TNRC6C	100	97.987	Cercocebus_atys
ENSCJAG00000019431	TNRC6C	100	92.599	ENSCLAG00000011139	TNRC6C	99	89.948	Chinchilla_lanigera
ENSCJAG00000019431	TNRC6C	100	97.581	ENSCSAG00000005167	TNRC6C	100	97.581	Chlorocebus_sabaeus
ENSCJAG00000019431	TNRC6C	75	91.415	ENSCHOG00000000088	TNRC6C	72	90.530	Choloepus_hoffmanni
ENSCJAG00000019431	TNRC6C	100	87.183	ENSCPBG00000027960	TNRC6C	100	87.183	Chrysemys_picta_bellii
ENSCJAG00000019431	TNRC6C	100	97.530	ENSCANG00000041771	TNRC6C	100	97.530	Colobus_angolensis_palliatus
ENSCJAG00000019431	TNRC6C	100	89.275	ENSCGRG00001022686	Tnrc6c	100	88.156	Cricetulus_griseus_chok1gshd
ENSCJAG00000019431	TNRC6C	100	89.698	ENSCGRG00000018041	Tnrc6c	100	88.156	Cricetulus_griseus_crigri
ENSCJAG00000019431	TNRC6C	80	52.687	ENSCSEG00000012744	tnrc6c1	98	43.670	Cynoglossus_semilaevis
ENSCJAG00000019431	TNRC6C	100	53.011	ENSDARG00000076847	tnrc6c1	99	53.616	Danio_rerio
ENSCJAG00000019431	TNRC6C	100	88.337	ENSDNOG00000003247	TNRC6C	99	88.669	Dasypus_novemcinctus
ENSCJAG00000019431	TNRC6C	100	85.697	ENSDORG00000004558	Tnrc6c	100	85.227	Dipodomys_ordii
ENSCJAG00000019431	TNRC6C	90	83.130	ENSETEG00000005527	TNRC6C	86	83.803	Echinops_telfairi
ENSCJAG00000019431	TNRC6C	100	90.828	ENSEASG00005004799	TNRC6C	100	90.888	Equus_asinus_asinus
ENSCJAG00000019431	TNRC6C	100	90.828	ENSECAG00000012486	TNRC6C	99	90.344	Equus_caballus
ENSCJAG00000019431	TNRC6C	96	91.497	ENSEEUG00000010008	TNRC6C	96	92.047	Erinaceus_europaeus
ENSCJAG00000019431	TNRC6C	100	88.955	ENSFCAG00000028358	TNRC6C	100	88.895	Felis_catus
ENSCJAG00000019431	TNRC6C	100	83.692	ENSFALG00000000848	TNRC6C	100	85.263	Ficedula_albicollis
ENSCJAG00000019431	TNRC6C	100	90.941	ENSFDAG00000010368	TNRC6C	100	89.288	Fukomys_damarensis
ENSCJAG00000019431	TNRC6C	97	46.849	ENSFHEG00000002936	tnrc6c1	99	45.713	Fundulus_heteroclitus
ENSCJAG00000019431	TNRC6C	100	87.988	ENSGALG00000001725	TNRC6C	100	87.811	Gallus_gallus
ENSCJAG00000019431	TNRC6C	100	48.453	ENSGAFG00000019019	tnrc6c1	100	48.786	Gambusia_affinis
ENSCJAG00000019431	TNRC6C	95	52.460	ENSGACG00000012320	tnrc6c1	97	47.813	Gasterosteus_aculeatus
ENSCJAG00000019431	TNRC6C	100	86.541	ENSGAGG00000022043	TNRC6C	99	86.714	Gopherus_agassizii
ENSCJAG00000019431	TNRC6C	100	97.582	ENSGGOG00000011304	TNRC6C	100	97.582	Gorilla_gorilla
ENSCJAG00000019431	TNRC6C	98	49.072	ENSHBUG00000010846	tnrc6c1	99	48.652	Haplochromis_burtoni
ENSCJAG00000019431	TNRC6C	100	92.303	ENSHGLG00000004809	TNRC6C	99	89.537	Heterocephalus_glaber_female
ENSCJAG00000019431	TNRC6C	100	91.279	ENSHGLG00100012597	TNRC6C	99	89.745	Heterocephalus_glaber_male
ENSCJAG00000019431	TNRC6C	99	50.541	ENSIPUG00000000818	tnrc6c1	98	51.456	Ictalurus_punctatus
ENSCJAG00000019431	TNRC6C	100	90.952	ENSSTOG00000009101	TNRC6C	100	88.627	Ictidomys_tridecemlineatus
ENSCJAG00000019431	TNRC6C	100	88.686	ENSJJAG00000017055	Tnrc6c	99	86.681	Jaculus_jaculus
ENSCJAG00000019431	TNRC6C	99	47.859	ENSKMAG00000021023	tnrc6c1	100	50.432	Kryptolebias_marmoratus
ENSCJAG00000019431	TNRC6C	100	75.249	ENSLACG00000015283	TNRC6C	100	73.915	Latimeria_chalumnae
ENSCJAG00000019431	TNRC6C	99	56.393	ENSLOCG00000013377	tnrc6c1	99	55.339	Lepisosteus_oculatus
ENSCJAG00000019431	TNRC6C	100	90.395	ENSLAFG00000011122	TNRC6C	99	88.802	Loxodonta_africana
ENSCJAG00000019431	TNRC6C	100	98.105	ENSMFAG00000043943	TNRC6C	100	98.105	Macaca_fascicularis
ENSCJAG00000019431	TNRC6C	100	98.105	ENSMMUG00000011924	TNRC6C	100	98.105	Macaca_mulatta
ENSCJAG00000019431	TNRC6C	100	98.046	ENSMNEG00000030405	TNRC6C	100	98.046	Macaca_nemestrina
ENSCJAG00000019431	TNRC6C	100	98.046	ENSMLEG00000033436	TNRC6C	100	98.046	Mandrillus_leucophaeus
ENSCJAG00000019431	TNRC6C	94	52.941	ENSMAMG00000023613	tnrc6c1	100	50.831	Mastacembelus_armatus
ENSCJAG00000019431	TNRC6C	98	50.297	ENSMZEG00005010920	tnrc6c1	99	48.528	Maylandia_zebra
ENSCJAG00000019431	TNRC6C	99	80.010	ENSMGAG00000003906	TNRC6C	100	80.093	Meleagris_gallopavo
ENSCJAG00000019431	TNRC6C	100	89.216	ENSMAUG00000021618	Tnrc6c	100	89.157	Mesocricetus_auratus
ENSCJAG00000019431	TNRC6C	100	93.902	ENSMICG00000003952	TNRC6C	100	93.783	Microcebus_murinus
ENSCJAG00000019431	TNRC6C	100	91.356	ENSMOCG00000015879	Tnrc6c	100	88.895	Microtus_ochrogaster
ENSCJAG00000019431	TNRC6C	93	55.419	ENSMMOG00000005203	tnrc6c1	100	50.368	Mola_mola
ENSCJAG00000019431	TNRC6C	100	86.647	ENSMODG00000001785	TNRC6C	99	84.919	Monodelphis_domestica
ENSCJAG00000019431	TNRC6C	100	90.882	MGP_CAROLIEiJ_G0017465	Tnrc6c	100	88.446	Mus_caroli
ENSCJAG00000019431	TNRC6C	100	90.645	ENSMUSG00000025571	Tnrc6c	100	88.222	Mus_musculus
ENSCJAG00000019431	TNRC6C	100	90.586	MGP_PahariEiJ_G0018593	Tnrc6c	100	88.166	Mus_pahari
ENSCJAG00000019431	TNRC6C	100	90.705	MGP_SPRETEiJ_G0018309	Tnrc6c	100	88.278	Mus_spretus
ENSCJAG00000019431	TNRC6C	99	88.263	ENSMPUG00000013348	TNRC6C	98	88.345	Mustela_putorius_furo
ENSCJAG00000019431	TNRC6C	100	81.067	ENSMLUG00000014431	TNRC6C	98	81.430	Myotis_lucifugus
ENSCJAG00000019431	TNRC6C	100	90.454	ENSNGAG00000012203	Tnrc6c	99	88.906	Nannospalax_galili
ENSCJAG00000019431	TNRC6C	91	53.119	ENSNBRG00000005344	tnrc6c1	99	49.100	Neolamprologus_brichardi
ENSCJAG00000019431	TNRC6C	99	95.369	ENSNLEG00000000047	TNRC6C	99	95.369	Nomascus_leucogenys
ENSCJAG00000019431	TNRC6C	97	81.394	ENSMEUG00000005104	TNRC6C	99	89.583	Notamacropus_eugenii
ENSCJAG00000019431	TNRC6C	100	91.652	ENSODEG00000012499	TNRC6C	100	91.829	Octodon_degus
ENSCJAG00000019431	TNRC6C	94	50.548	ENSONIG00000002210	tnrc6c1	96	51.527	Oreochromis_niloticus
ENSCJAG00000019431	TNRC6C	99	63.578	ENSOANG00000009758	-	100	61.277	Ornithorhynchus_anatinus
ENSCJAG00000019431	TNRC6C	84	80.153	ENSOCUG00000006122	TNRC6C	95	77.778	Oryctolagus_cuniculus
ENSCJAG00000019431	TNRC6C	91	50.427	ENSORLG00000009837	tnrc6c1	100	67.286	Oryzias_latipes
ENSCJAG00000019431	TNRC6C	91	50.488	ENSORLG00020016510	tnrc6c1	100	48.976	Oryzias_latipes_hni
ENSCJAG00000019431	TNRC6C	72	45.639	ENSORLG00015000171	tnrc6c1	98	44.391	Oryzias_latipes_hsok
ENSCJAG00000019431	TNRC6C	91	50.979	ENSOMEG00000000357	tnrc6c1	99	47.907	Oryzias_melastigma
ENSCJAG00000019431	TNRC6C	100	90.104	ENSOGAG00000007197	TNRC6C	100	91.748	Otolemur_garnettii
ENSCJAG00000019431	TNRC6C	95	84.082	ENSOARG00000006041	TNRC6C	98	84.407	Ovis_aries
ENSCJAG00000019431	TNRC6C	100	97.928	ENSPPAG00000027160	TNRC6C	100	97.928	Pan_paniscus
ENSCJAG00000019431	TNRC6C	100	88.955	ENSPPRG00000018881	TNRC6C	100	88.895	Panthera_pardus
ENSCJAG00000019431	TNRC6C	90	86.463	ENSPTIG00000008791	TNRC6C	69	94.286	Panthera_tigris_altaica
ENSCJAG00000019431	TNRC6C	100	98.147	ENSPTRG00000009699	TNRC6C	100	98.147	Pan_troglodytes
ENSCJAG00000019431	TNRC6C	100	98.044	ENSPANG00000019994	TNRC6C	100	98.044	Papio_anubis
ENSCJAG00000019431	TNRC6C	96	51.694	ENSPKIG00000005428	tnrc6c1	100	50.937	Paramormyrops_kingsleyae
ENSCJAG00000019431	TNRC6C	100	85.866	ENSPSIG00000018069	TNRC6C	100	83.445	Pelodiscus_sinensis
ENSCJAG00000019431	TNRC6C	79	53.978	ENSPMGG00000022911	tnrc6c1	97	62.857	Periophthalmus_magnuspinnatus
ENSCJAG00000019431	TNRC6C	100	90.395	ENSPEMG00000009785	Tnrc6c	100	87.979	Peromyscus_maniculatus_bairdii
ENSCJAG00000019431	TNRC6C	58	86.051	ENSPCIG00000017421	-	99	85.905	Phascolarctos_cinereus
ENSCJAG00000019431	TNRC6C	100	48.431	ENSPFOG00000012560	tnrc6c1	97	56.224	Poecilia_formosa
ENSCJAG00000019431	TNRC6C	100	48.487	ENSPLAG00000021055	tnrc6c1	100	49.972	Poecilia_latipinna
ENSCJAG00000019431	TNRC6C	100	98.044	ENSPPYG00000008679	TNRC6C	99	98.044	Pongo_abelii
ENSCJAG00000019431	TNRC6C	93	91.706	ENSPCAG00000012510	TNRC6C	91	91.706	Procavia_capensis
ENSCJAG00000019431	TNRC6C	100	94.257	ENSPCOG00000021451	TNRC6C	100	94.257	Propithecus_coquereli
ENSCJAG00000019431	TNRC6C	96	88.192	ENSPVAG00000002008	TNRC6C	95	88.136	Pteropus_vampyrus
ENSCJAG00000019431	TNRC6C	100	47.614	ENSPNYG00000014477	tnrc6c1	99	48.289	Pundamilia_nyererei
ENSCJAG00000019431	TNRC6C	100	90.065	ENSRNOG00000022395	Tnrc6c	100	90.065	Rattus_norvegicus
ENSCJAG00000019431	TNRC6C	100	97.928	ENSRBIG00000027777	TNRC6C	100	97.928	Rhinopithecus_bieti
ENSCJAG00000019431	TNRC6C	100	97.993	ENSRROG00000042912	TNRC6C	100	97.993	Rhinopithecus_roxellana
ENSCJAG00000019431	TNRC6C	100	98.456	ENSSBOG00000023981	TNRC6C	100	98.456	Saimiri_boliviensis_boliviensis
ENSCJAG00000019431	TNRC6C	52	85.730	ENSSHAG00000018330	-	100	88.317	Sarcophilus_harrisii
ENSCJAG00000019431	TNRC6C	81	56.289	ENSSFOG00015004735	-	99	61.257	Scleropages_formosus
ENSCJAG00000019431	TNRC6C	74	59.852	ENSSFOG00015006475	tnrc6c1	98	51.403	Scleropages_formosus
ENSCJAG00000019431	TNRC6C	100	48.749	ENSSMAG00000012761	tnrc6c1	99	50.403	Scophthalmus_maximus
ENSCJAG00000019431	TNRC6C	100	50.429	ENSSDUG00000002366	tnrc6c1	99	49.262	Seriola_dumerili
ENSCJAG00000019431	TNRC6C	100	48.668	ENSSLDG00000025613	tnrc6c1	100	49.945	Seriola_lalandi_dorsalis
ENSCJAG00000019431	TNRC6C	91	89.224	ENSSARG00000006816	TNRC6C	91	87.395	Sorex_araneus
ENSCJAG00000019431	TNRC6C	83	84.698	ENSSPUG00000007341	TNRC6C	99	84.564	Sphenodon_punctatus
ENSCJAG00000019431	TNRC6C	78	53.465	ENSSPAG00000014977	tnrc6c1	97	48.753	Stegastes_partitus
ENSCJAG00000019431	TNRC6C	100	85.385	ENSSSCG00000034373	TNRC6C	100	87.662	Sus_scrofa
ENSCJAG00000019431	TNRC6C	100	87.759	ENSTGUG00000007733	TNRC6C	100	85.403	Taeniopygia_guttata
ENSCJAG00000019431	TNRC6C	87	51.480	ENSTRUG00000011685	tnrc6c1	100	49.281	Takifugu_rubripes
ENSCJAG00000019431	TNRC6C	88	52.421	ENSTNIG00000005273	tnrc6c1	100	60.097	Tetraodon_nigroviridis
ENSCJAG00000019431	TNRC6C	64	90.234	ENSTBEG00000005046	TNRC6C	100	82.586	Tupaia_belangeri
ENSCJAG00000019431	TNRC6C	100	90.597	ENSTTRG00000010828	TNRC6C	97	90.656	Tursiops_truncatus
ENSCJAG00000019431	TNRC6C	100	88.477	ENSUMAG00000013614	TNRC6C	99	89.364	Ursus_maritimus
ENSCJAG00000019431	TNRC6C	52	80.638	ENSVPAG00000006765	-	99	80.641	Vicugna_pacos
ENSCJAG00000019431	TNRC6C	100	91.307	ENSVVUG00000015268	TNRC6C	100	91.307	Vulpes_vulpes
ENSCJAG00000019431	TNRC6C	100	75.323	ENSXETG00000019470	tnrc6c	100	74.677	Xenopus_tropicalis
ENSCJAG00000019431	TNRC6C	100	49.456	ENSXMAG00000025971	tnrc6c1	100	48.813	Xiphophorus_maculatus