EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000019649 (Gene tree)
Gene ID: 100391443
Gene Symbol: DDX42
Alias: RHELP|RNAHP|SF3B8|SF3b125
Full Name: DEAD-box helicase 42
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 36814 bases
Position: chrNTIC01034389.1:82811380-82848193
Accession: 100391443
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000036539	ResIII	PF04851.15	5.5e-07	1	1
ENSCJAP00000049482	ResIII	PF04851.15	7.5e-07	1	1
ENSCJAP00000050898	ResIII	PF04851.15	8.3e-07	1	1
ENSCJAP00000048739	ResIII	PF04851.15	8.4e-07	1	1
ENSCJAP00000049482	DEAD	PF00270.29	4.3e-50	1	1
ENSCJAP00000036539	DEAD	PF00270.29	4.7e-50	1	1
ENSCJAP00000050898	DEAD	PF00270.29	8.4e-50	1	1
ENSCJAP00000048739	DEAD	PF00270.29	8.5e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000038595	DDX42-201	2335	-	ENSCJAP00000036539	772 (aa)	-	F7GD34
ENSCJAT00000062412	DDX42-203	2790	-	ENSCJAP00000050898	929 (aa)	-	F7EVV9
ENSCJAT00000058151	DDX42-204	2163	-	ENSCJAP00000049482	720 (aa)	-	F7AFU7
ENSCJAT00000057732	DDX42-202	2821	-	ENSCJAP00000048739	934 (aa)	XP_002748184	F6QVH6

Gene Model

Click here to download ENSCJAG00000019649's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000019649's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000019649	DDX42	60	43.880	ENSCJAG00000011797	DDX17	86	43.750
ENSCJAG00000019649	DDX42	56	37.923	ENSCJAG00000001951	DDX4	77	36.087
ENSCJAG00000019649	DDX42	50	30.685	ENSCJAG00000003152	DDX39B	84	30.685
ENSCJAG00000019649	DDX42	63	38.298	ENSCJAG00000006595	DDX41	82	35.849
ENSCJAG00000019649	DDX42	50	32.345	ENSCJAG00000021414	DDX18	53	32.884
ENSCJAG00000019649	DDX42	53	30.287	ENSCJAG00000048589	-	90	30.729
ENSCJAG00000019649	DDX42	65	40.412	ENSCJAG00000019310	DDX5	89	39.265
ENSCJAG00000019649	DDX42	53	33.501	ENSCJAG00000015190	DDX52	65	33.501
ENSCJAG00000019649	DDX42	59	33.796	ENSCJAG00000005183	DDX59	68	34.028
ENSCJAG00000019649	DDX42	52	40.347	ENSCJAG00000020775	DDX23	51	39.234
ENSCJAG00000019649	DDX42	54	37.470	ENSCJAG00000015787	DDX3X	68	36.629
ENSCJAG00000019649	DDX42	53	34.577	ENSCJAG00000042114	DDX49	78	34.577
ENSCJAG00000019649	DDX42	68	43.651	ENSCJAG00000005697	DDX46	60	39.583
ENSCJAG00000019649	DDX42	50	31.183	ENSCJAG00000014587	-	76	31.183
ENSCJAG00000019649	DDX42	61	37.719	ENSCJAG00000009966	DDX43	69	37.719

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000019649	DDX42	99	99.608	ENSG00000198231	DDX42	100	100.000	Homo_sapiens
ENSCJAG00000019649	DDX42	100	77.778	ENSAPOG00000017675	ddx42	97	74.492	Acanthochromis_polyacanthus
ENSCJAG00000019649	DDX42	99	98.693	ENSAMEG00000003200	DDX42	100	96.368	Ailuropoda_melanoleuca
ENSCJAG00000019649	DDX42	89	81.677	ENSACIG00000007376	ddx42	99	72.796	Amphilophus_citrinellus
ENSCJAG00000019649	DDX42	99	81.338	ENSAOCG00000003520	ddx42	99	72.392	Amphiprion_ocellaris
ENSCJAG00000019649	DDX42	99	81.677	ENSAPEG00000000984	ddx42	99	72.593	Amphiprion_percula
ENSCJAG00000019649	DDX42	97	78.635	ENSATEG00000022920	ddx42	99	72.468	Anabas_testudineus
ENSCJAG00000019649	DDX42	99	93.005	ENSAPLG00000010544	DDX42	100	84.405	Anas_platyrhynchos
ENSCJAG00000019649	DDX42	99	91.958	ENSACAG00000003994	DDX42	99	84.378	Anolis_carolinensis
ENSCJAG00000019649	DDX42	100	99.465	ENSANAG00000035693	DDX42	100	99.465	Aotus_nancymaae
ENSCJAG00000019649	DDX42	99	80.928	ENSACLG00000025113	ddx42	99	73.355	Astatotilapia_calliptera
ENSCJAG00000019649	DDX42	94	81.310	ENSAMXG00000011435	ddx42	99	70.607	Astyanax_mexicanus
ENSCJAG00000019649	DDX42	99	97.650	ENSBTAG00000021058	DDX42	100	95.192	Bos_taurus
ENSCJAG00000019649	DDX42	81	52.623	WBGene00008119	C46F11.4	79	52.705	Caenorhabditis_elegans
ENSCJAG00000019649	DDX42	99	98.564	ENSCAFG00000012818	DDX42	100	96.257	Canis_familiaris
ENSCJAG00000019649	DDX42	99	98.695	ENSCAFG00020026631	DDX42	100	96.364	Canis_lupus_dingo
ENSCJAG00000019649	DDX42	99	98.564	ENSCHIG00000014431	DDX42	100	95.208	Capra_hircus
ENSCJAG00000019649	DDX42	99	98.037	ENSTSYG00000001380	DDX42	100	95.187	Carlito_syrichta
ENSCJAG00000019649	DDX42	94	76.000	ENSCAPG00000013621	DDX42	94	76.000	Cavia_aperea
ENSCJAG00000019649	DDX42	99	98.303	ENSCPOG00000005633	DDX42	100	95.815	Cavia_porcellus
ENSCJAG00000019649	DDX42	97	99.424	ENSCCAG00000020612	DDX42	100	99.259	Cebus_capucinus
ENSCJAG00000019649	DDX42	99	99.477	ENSCATG00000030490	DDX42	100	98.294	Cercocebus_atys
ENSCJAG00000019649	DDX42	99	98.564	ENSCLAG00000003497	DDX42	100	96.455	Chinchilla_lanigera
ENSCJAG00000019649	DDX42	100	94.592	ENSCSAG00000003914	DDX42	100	94.592	Chlorocebus_sabaeus
ENSCJAG00000019649	DDX42	79	95.495	ENSCHOG00000006241	DDX42	79	95.495	Choloepus_hoffmanni
ENSCJAG00000019649	DDX42	99	92.358	ENSCPBG00000026682	DDX42	100	84.342	Chrysemys_picta_bellii
ENSCJAG00000019649	DDX42	62	66.368	ENSCING00000001837	-	94	67.991	Ciona_intestinalis
ENSCJAG00000019649	DDX42	53	71.802	ENSCSAVG00000002180	-	99	72.178	Ciona_savignyi
ENSCJAG00000019649	DDX42	99	99.477	ENSCANG00000034663	DDX42	100	98.401	Colobus_angolensis_palliatus
ENSCJAG00000019649	DDX42	99	97.662	ENSCGRG00001009775	Ddx42	100	95.269	Cricetulus_griseus_chok1gshd
ENSCJAG00000019649	DDX42	99	97.662	ENSCGRG00000011718	Ddx42	100	95.269	Cricetulus_griseus_crigri
ENSCJAG00000019649	DDX42	99	78.784	ENSCSEG00000021574	ddx42	99	70.256	Cynoglossus_semilaevis
ENSCJAG00000019649	DDX42	97	80.667	ENSCVAG00000011404	ddx42	99	71.885	Cyprinodon_variegatus
ENSCJAG00000019649	DDX42	98	80.996	ENSDARG00000037928	ddx42	99	71.932	Danio_rerio
ENSCJAG00000019649	DDX42	97	94.786	ENSDNOG00000007961	DDX42	100	89.765	Dasypus_novemcinctus
ENSCJAG00000019649	DDX42	97	93.410	ENSDORG00000004199	Ddx42	100	88.103	Dipodomys_ordii
ENSCJAG00000019649	DDX42	82	60.461	FBgn0036104	CG6418	87	56.999	Drosophila_melanogaster
ENSCJAG00000019649	DDX42	96	73.475	ENSEBUG00000001155	ddx42	91	73.342	Eptatretus_burgeri
ENSCJAG00000019649	DDX42	99	98.695	ENSEASG00005013089	DDX42	100	96.898	Equus_asinus_asinus
ENSCJAG00000019649	DDX42	99	98.825	ENSECAG00000022684	DDX42	100	96.898	Equus_caballus
ENSCJAG00000019649	DDX42	71	100.000	ENSEEUG00000009144	DDX42	85	100.000	Erinaceus_europaeus
ENSCJAG00000019649	DDX42	98	79.450	ENSELUG00000020593	ddx42	99	71.036	Esox_lucius
ENSCJAG00000019649	DDX42	99	98.956	ENSFCAG00000003499	DDX42	100	97.112	Felis_catus
ENSCJAG00000019649	DDX42	99	93.126	ENSFALG00000004675	DDX42	74	88.717	Ficedula_albicollis
ENSCJAG00000019649	DDX42	99	98.695	ENSFDAG00000020516	DDX42	100	96.030	Fukomys_damarensis
ENSCJAG00000019649	DDX42	97	80.345	ENSFHEG00000023290	ddx42	99	71.064	Fundulus_heteroclitus
ENSCJAG00000019649	DDX42	91	78.279	ENSGMOG00000004595	ddx42	88	78.279	Gadus_morhua
ENSCJAG00000019649	DDX42	99	92.876	ENSGALG00000000581	DDX42	100	83.525	Gallus_gallus
ENSCJAG00000019649	DDX42	100	75.836	ENSGAFG00000011846	ddx42	96	74.350	Gambusia_affinis
ENSCJAG00000019649	DDX42	97	77.867	ENSGACG00000009782	ddx42	99	68.376	Gasterosteus_aculeatus
ENSCJAG00000019649	DDX42	99	92.218	ENSGAGG00000024411	DDX42	99	84.100	Gopherus_agassizii
ENSCJAG00000019649	DDX42	99	99.608	ENSGGOG00000006779	DDX42	100	98.401	Gorilla_gorilla
ENSCJAG00000019649	DDX42	99	81.186	ENSHBUG00000008705	ddx42	99	73.567	Haplochromis_burtoni
ENSCJAG00000019649	DDX42	100	92.258	ENSHGLG00000010024	DDX42	100	92.258	Heterocephalus_glaber_female
ENSCJAG00000019649	DDX42	97	74.138	ENSHGLG00100007138	-	95	73.364	Heterocephalus_glaber_male
ENSCJAG00000019649	DDX42	99	98.303	ENSHGLG00100004479	-	100	96.578	Heterocephalus_glaber_male
ENSCJAG00000019649	DDX42	96	80.187	ENSHCOG00000003357	ddx42	97	74.594	Hippocampus_comes
ENSCJAG00000019649	DDX42	97	79.894	ENSIPUG00000013327	ddx42	100	70.607	Ictalurus_punctatus
ENSCJAG00000019649	DDX42	99	98.957	ENSSTOG00000008922	DDX42	100	97.118	Ictidomys_tridecemlineatus
ENSCJAG00000019649	DDX42	99	97.925	ENSJJAG00000011727	Ddx42	100	95.596	Jaculus_jaculus
ENSCJAG00000019649	DDX42	97	81.722	ENSKMAG00000009914	ddx42	99	72.689	Kryptolebias_marmoratus
ENSCJAG00000019649	DDX42	98	76.823	ENSLBEG00000004687	ddx42	99	67.476	Labrus_bergylta
ENSCJAG00000019649	DDX42	97	86.613	ENSLACG00000013476	DDX42	97	78.158	Latimeria_chalumnae
ENSCJAG00000019649	DDX42	99	83.615	ENSLOCG00000011764	ddx42	100	74.466	Lepisosteus_oculatus
ENSCJAG00000019649	DDX42	99	98.433	ENSLAFG00000003249	DDX42	100	96.578	Loxodonta_africana
ENSCJAG00000019649	DDX42	99	99.477	ENSMFAG00000031356	DDX42	100	98.294	Macaca_fascicularis
ENSCJAG00000019649	DDX42	99	99.477	ENSMMUG00000016762	DDX42	100	98.285	Macaca_mulatta
ENSCJAG00000019649	DDX42	99	99.477	ENSMNEG00000038250	DDX42	100	98.294	Macaca_nemestrina
ENSCJAG00000019649	DDX42	99	99.477	ENSMLEG00000043080	DDX42	100	98.401	Mandrillus_leucophaeus
ENSCJAG00000019649	DDX42	99	81.783	ENSMAMG00000021888	ddx42	98	72.152	Mastacembelus_armatus
ENSCJAG00000019649	DDX42	99	80.928	ENSMZEG00005023103	ddx42	99	73.355	Maylandia_zebra
ENSCJAG00000019649	DDX42	99	92.876	ENSMGAG00000001822	DDX42	100	82.645	Meleagris_gallopavo
ENSCJAG00000019649	DDX42	97	97.414	ENSMAUG00000020774	-	94	97.159	Mesocricetus_auratus
ENSCJAG00000019649	DDX42	99	98.953	ENSMICG00000009952	DDX42	100	96.878	Microcebus_murinus
ENSCJAG00000019649	DDX42	99	97.792	ENSMOCG00000015504	Ddx42	100	94.516	Microtus_ochrogaster
ENSCJAG00000019649	DDX42	100	74.497	ENSMMOG00000016963	ddx42	87	71.346	Mola_mola
ENSCJAG00000019649	DDX42	60	97.645	ENSMODG00000009917	-	98	97.645	Monodelphis_domestica
ENSCJAG00000019649	DDX42	97	78.499	ENSMALG00000007800	ddx42	99	73.184	Monopterus_albus
ENSCJAG00000019649	DDX42	99	98.303	MGP_CAROLIEiJ_G0017314	Ddx42	100	96.129	Mus_caroli
ENSCJAG00000019649	DDX42	99	98.172	ENSMUSG00000020705	Ddx42	100	96.129	Mus_musculus
ENSCJAG00000019649	DDX42	88	99.114	MGP_PahariEiJ_G0018444	-	100	99.254	Mus_pahari
ENSCJAG00000019649	DDX42	99	98.433	MGP_SPRETEiJ_G0018158	Ddx42	100	96.237	Mus_spretus
ENSCJAG00000019649	DDX42	99	98.825	ENSMPUG00000014921	DDX42	100	96.387	Mustela_putorius_furo
ENSCJAG00000019649	DDX42	99	98.303	ENSMLUG00000011645	DDX42	100	95.047	Myotis_lucifugus
ENSCJAG00000019649	DDX42	99	98.825	ENSNGAG00000021897	Ddx42	100	96.348	Nannospalax_galili
ENSCJAG00000019649	DDX42	99	79.510	ENSNBRG00000004466	ddx42	99	72.081	Neolamprologus_brichardi
ENSCJAG00000019649	DDX42	99	99.739	ENSNLEG00000004248	DDX42	100	99.572	Nomascus_leucogenys
ENSCJAG00000019649	DDX42	81	82.444	ENSMEUG00000013227	-	85	82.444	Notamacropus_eugenii
ENSCJAG00000019649	DDX42	99	97.389	ENSOPRG00000014960	DDX42	100	94.883	Ochotona_princeps
ENSCJAG00000019649	DDX42	99	94.256	ENSODEG00000007810	DDX42	100	92.911	Octodon_degus
ENSCJAG00000019649	DDX42	99	81.057	ENSONIG00000000734	ddx42	99	73.461	Oreochromis_niloticus
ENSCJAG00000019649	DDX42	74	92.135	ENSOANG00000000265	DDX42	100	92.208	Ornithorhynchus_anatinus
ENSCJAG00000019649	DDX42	99	98.170	ENSOCUG00000004304	DDX42	88	96.184	Oryctolagus_cuniculus
ENSCJAG00000019649	DDX42	97	81.491	ENSORLG00000002395	ddx42	100	69.841	Oryzias_latipes
ENSCJAG00000019649	DDX42	97	81.758	ENSORLG00020011621	ddx42	100	71.444	Oryzias_latipes_hni
ENSCJAG00000019649	DDX42	97	81.625	ENSORLG00015004487	ddx42	100	71.233	Oryzias_latipes_hsok
ENSCJAG00000019649	DDX42	97	82.423	ENSOMEG00000020093	ddx42	100	71.190	Oryzias_melastigma
ENSCJAG00000019649	DDX42	99	99.085	ENSOGAG00000006872	DDX42	100	96.585	Otolemur_garnettii
ENSCJAG00000019649	DDX42	99	98.312	ENSOARG00000013540	DDX42	100	95.042	Ovis_aries
ENSCJAG00000019649	DDX42	99	99.739	ENSPPAG00000007496	DDX42	100	98.614	Pan_paniscus
ENSCJAG00000019649	DDX42	99	98.825	ENSPPRG00000002740	DDX42	100	96.898	Panthera_pardus
ENSCJAG00000019649	DDX42	99	98.825	ENSPTIG00000009932	DDX42	100	96.791	Panthera_tigris_altaica
ENSCJAG00000019649	DDX42	99	99.739	ENSPTRG00000009523	DDX42	100	98.614	Pan_troglodytes
ENSCJAG00000019649	DDX42	99	99.346	ENSPANG00000020990	DDX42	100	98.294	Papio_anubis
ENSCJAG00000019649	DDX42	97	81.891	ENSPKIG00000002901	ddx42	99	70.664	Paramormyrops_kingsleyae
ENSCJAG00000019649	DDX42	99	93.170	ENSPSIG00000010289	DDX42	98	91.379	Pelodiscus_sinensis
ENSCJAG00000019649	DDX42	97	78.075	ENSPMGG00000009323	ddx42	100	67.903	Periophthalmus_magnuspinnatus
ENSCJAG00000019649	DDX42	99	98.052	ENSPEMG00000006755	Ddx42	100	95.489	Peromyscus_maniculatus_bairdii
ENSCJAG00000019649	DDX42	96	72.572	ENSPMAG00000005580	ddx42	100	73.360	Petromyzon_marinus
ENSCJAG00000019649	DDX42	99	96.104	ENSPCIG00000009093	DDX42	100	91.102	Phascolarctos_cinereus
ENSCJAG00000019649	DDX42	100	78.266	ENSPFOG00000014104	ddx42	99	71.384	Poecilia_formosa
ENSCJAG00000019649	DDX42	100	78.266	ENSPLAG00000010522	ddx42	99	71.384	Poecilia_latipinna
ENSCJAG00000019649	DDX42	100	78.266	ENSPMEG00000010744	ddx42	99	71.280	Poecilia_mexicana
ENSCJAG00000019649	DDX42	100	75.960	ENSPREG00000009926	ddx42	99	70.881	Poecilia_reticulata
ENSCJAG00000019649	DDX42	99	97.255	ENSPPYG00000008531	DDX42	100	96.072	Pongo_abelii
ENSCJAG00000019649	DDX42	97	90.230	ENSPCAG00000002474	DDX42	100	90.128	Procavia_capensis
ENSCJAG00000019649	DDX42	100	87.152	ENSPCOG00000001559	DDX42	99	88.663	Propithecus_coquereli
ENSCJAG00000019649	DDX42	99	94.118	ENSPVAG00000000160	DDX42	100	92.308	Pteropus_vampyrus
ENSCJAG00000019649	DDX42	94	75.842	ENSPNYG00000013954	ddx42	97	70.677	Pundamilia_nyererei
ENSCJAG00000019649	DDX42	94	80.900	ENSPNAG00000017352	ddx42	99	70.208	Pygocentrus_nattereri
ENSCJAG00000019649	DDX42	99	98.042	ENSRNOG00000009474	Ddx42	100	95.699	Rattus_norvegicus
ENSCJAG00000019649	DDX42	99	99.477	ENSRBIG00000004781	DDX42	100	98.294	Rhinopithecus_bieti
ENSCJAG00000019649	DDX42	99	99.477	ENSRROG00000029794	DDX42	100	98.294	Rhinopithecus_roxellana
ENSCJAG00000019649	DDX42	100	99.465	ENSSBOG00000029624	DDX42	100	99.465	Saimiri_boliviensis_boliviensis
ENSCJAG00000019649	DDX42	76	64.247	ENSSHAG00000007919	-	99	60.565	Sarcophilus_harrisii
ENSCJAG00000019649	DDX42	99	96.364	ENSSHAG00000012896	-	100	91.631	Sarcophilus_harrisii
ENSCJAG00000019649	DDX42	99	80.566	ENSSFOG00015014064	ddx42	83	80.566	Scleropages_formosus
ENSCJAG00000019649	DDX42	97	81.758	ENSSMAG00000009077	ddx42	99	72.172	Scophthalmus_maximus
ENSCJAG00000019649	DDX42	99	80.538	ENSSDUG00000022221	ddx42	99	72.392	Seriola_dumerili
ENSCJAG00000019649	DDX42	99	80.440	ENSSLDG00000018483	ddx42	99	71.915	Seriola_lalandi_dorsalis
ENSCJAG00000019649	DDX42	99	98.039	ENSSARG00000009847	DDX42	100	95.508	Sorex_araneus
ENSCJAG00000019649	DDX42	99	93.126	ENSSPUG00000018806	DDX42	100	85.021	Sphenodon_punctatus
ENSCJAG00000019649	DDX42	99	81.210	ENSSPAG00000013055	ddx42	99	72.359	Stegastes_partitus
ENSCJAG00000019649	DDX42	96	97.826	ENSSSCG00000017289	DDX42	97	95.037	Sus_scrofa
ENSCJAG00000019649	DDX42	99	93.014	ENSTGUG00000001931	DDX42	100	83.560	Taeniopygia_guttata
ENSCJAG00000019649	DDX42	96	81.660	ENSTRUG00000010711	ddx42	99	81.556	Takifugu_rubripes
ENSCJAG00000019649	DDX42	52	82.544	ENSTNIG00000014936	ddx42	100	82.544	Tetraodon_nigroviridis
ENSCJAG00000019649	DDX42	98	93.553	ENSTBEG00000010159	DDX42	99	93.553	Tupaia_belangeri
ENSCJAG00000019649	DDX42	99	98.566	ENSTTRG00000006962	DDX42	100	96.368	Tursiops_truncatus
ENSCJAG00000019649	DDX42	99	98.693	ENSUAMG00000007321	DDX42	100	96.261	Ursus_americanus
ENSCJAG00000019649	DDX42	99	98.170	ENSUMAG00000017438	DDX42	100	95.406	Ursus_maritimus
ENSCJAG00000019649	DDX42	100	87.487	ENSVPAG00000009633	DDX42	100	87.487	Vicugna_pacos
ENSCJAG00000019649	DDX42	99	98.695	ENSVVUG00000006095	DDX42	100	96.578	Vulpes_vulpes
ENSCJAG00000019649	DDX42	96	88.306	ENSXETG00000003245	ddx42	100	76.360	Xenopus_tropicalis
ENSCJAG00000019649	DDX42	88	81.417	ENSXCOG00000017560	ddx42	97	71.970	Xiphophorus_couchianus
ENSCJAG00000019649	DDX42	100	78.742	ENSXMAG00000008138	ddx42	99	72.679	Xiphophorus_maculatus