EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000019826 (Gene tree)
Gene ID: 100414001
Gene Symbol: VARS2
Alias: DKFZP434L1435|G7a|KIAA1885|VARS2L|VARSL
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 14042 bases
Position: chrNTIC01022223.1:137462425-137476466
Accession: 100414001
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000036875	tRNA-synt_1g	PF09334.11	1.2e-14	1	1
ENSCJAP00000036867	tRNA-synt_1g	PF09334.11	1.3e-14	1	1
ENSCJAP00000036875	Anticodon_1	PF08264.13	5.9e-31	1	1
ENSCJAP00000036867	Anticodon_1	PF08264.13	6.1e-31	1	1
ENSCJAP00000036875	tRNA-synt_1	PF00133.22	1.7e-182	1	1
ENSCJAP00000036867	tRNA-synt_1	PF00133.22	1.8e-182	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000038944	VARS2-201	5278	-	ENSCJAP00000036875	1063 (aa)	XP_008992372	F6SY36
ENSCJAT00000038936	VARS2-202	3282	-	ENSCJAP00000036867	1093 (aa)	-	F6SYV1

Gene Model

Click here to download ENSCJAG00000019826's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000019826's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000019826	VARS2	91	52.117	ENSCJAG00000002604	VARS	81	50.727

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000019826	VARS2	92	51.434	ENSAPOG00000007396	vars2	97	50.380	Acanthochromis_polyacanthus
ENSCJAG00000019826	VARS2	99	86.064	ENSAMEG00000012997	VARS2	99	84.785	Ailuropoda_melanoleuca
ENSCJAG00000019826	VARS2	95	51.062	ENSACIG00000004344	vars2	97	50.965	Amphilophus_citrinellus
ENSCJAG00000019826	VARS2	92	50.841	ENSAOCG00000000476	vars2	97	49.668	Amphiprion_ocellaris
ENSCJAG00000019826	VARS2	92	50.891	ENSAPEG00000008646	vars2	95	49.715	Amphiprion_percula
ENSCJAG00000019826	VARS2	92	52.647	ENSATEG00000012291	vars2	97	51.388	Anabas_testudineus
ENSCJAG00000019826	VARS2	99	57.341	ENSACAG00000022093	VARS2	100	57.525	Anolis_carolinensis
ENSCJAG00000019826	VARS2	100	96.331	ENSANAG00000038018	VARS2	100	96.331	Aotus_nancymaae
ENSCJAG00000019826	VARS2	97	49.766	ENSACLG00000018673	vars2	99	49.673	Astatotilapia_calliptera
ENSCJAG00000019826	VARS2	97	51.981	ENSAMXG00000017773	vars2	98	51.445	Astyanax_mexicanus
ENSCJAG00000019826	VARS2	99	88.046	ENSBTAG00000010698	VARS2	99	87.747	Bos_taurus
ENSCJAG00000019826	VARS2	99	85.122	ENSCAFG00000000454	VARS2	100	85.122	Canis_familiaris
ENSCJAG00000019826	VARS2	87	85.637	ENSCAFG00020019387	VARS2	95	85.684	Canis_lupus_dingo
ENSCJAG00000019826	VARS2	99	88.140	ENSCHIG00000007847	VARS2	99	87.830	Capra_hircus
ENSCJAG00000019826	VARS2	100	88.816	ENSTSYG00000009904	VARS2	100	88.816	Carlito_syrichta
ENSCJAG00000019826	VARS2	88	84.013	ENSCAPG00000017770	VARS2	99	84.013	Cavia_aperea
ENSCJAG00000019826	VARS2	99	83.631	ENSCPOG00000021834	VARS2	99	83.631	Cavia_porcellus
ENSCJAG00000019826	VARS2	100	97.178	ENSCCAG00000037907	VARS2	100	97.178	Cebus_capucinus
ENSCJAG00000019826	VARS2	100	94.638	ENSCATG00000032554	VARS2	100	94.638	Cercocebus_atys
ENSCJAG00000019826	VARS2	99	83.695	ENSCLAG00000002889	VARS2	99	83.695	Chinchilla_lanigera
ENSCJAG00000019826	VARS2	100	93.979	ENSCSAG00000008327	VARS2	100	93.979	Chlorocebus_sabaeus
ENSCJAG00000019826	VARS2	90	62.848	ENSCPBG00000021502	VARS2	96	62.848	Chrysemys_picta_bellii
ENSCJAG00000019826	VARS2	100	94.356	ENSCANG00000014991	VARS2	100	94.315	Colobus_angolensis_palliatus
ENSCJAG00000019826	VARS2	98	81.966	ENSCGRG00001021535	Vars2	100	81.733	Cricetulus_griseus_chok1gshd
ENSCJAG00000019826	VARS2	98	81.966	ENSCGRG00000014112	Vars2	100	81.733	Cricetulus_griseus_crigri
ENSCJAG00000019826	VARS2	80	69.799	ENSCSEG00000015432	vars2	95	56.177	Cynoglossus_semilaevis
ENSCJAG00000019826	VARS2	63	52.872	ENSCVAG00000017765	vars2	94	52.725	Cyprinodon_variegatus
ENSCJAG00000019826	VARS2	96	51.585	ENSDARG00000056717	vars2	96	51.591	Danio_rerio
ENSCJAG00000019826	VARS2	78	86.603	ENSDORG00000008516	Vars2	93	86.603	Dipodomys_ordii
ENSCJAG00000019826	VARS2	99	75.472	ENSETEG00000014844	VARS2	99	75.472	Echinops_telfairi
ENSCJAG00000019826	VARS2	99	88.931	ENSEASG00005019997	VARS2	99	88.007	Equus_asinus_asinus
ENSCJAG00000019826	VARS2	99	90.076	ENSECAG00000018202	VARS2	99	90.076	Equus_caballus
ENSCJAG00000019826	VARS2	63	85.437	ENSEEUG00000012591	-	64	85.437	Erinaceus_europaeus
ENSCJAG00000019826	VARS2	93	51.938	ENSELUG00000017824	vars2	96	51.270	Esox_lucius
ENSCJAG00000019826	VARS2	99	86.673	ENSFCAG00000010531	VARS2	99	86.673	Felis_catus
ENSCJAG00000019826	VARS2	99	84.623	ENSFDAG00000017216	VARS2	99	84.623	Fukomys_damarensis
ENSCJAG00000019826	VARS2	84	52.067	ENSFHEG00000013932	vars2	91	50.754	Fundulus_heteroclitus
ENSCJAG00000019826	VARS2	88	54.669	ENSGMOG00000018960	vars2	99	54.565	Gadus_morhua
ENSCJAG00000019826	VARS2	89	47.452	ENSGAFG00000004737	vars2	92	47.339	Gambusia_affinis
ENSCJAG00000019826	VARS2	92	53.030	ENSGACG00000001464	vars2	99	52.929	Gasterosteus_aculeatus
ENSCJAG00000019826	VARS2	90	61.924	ENSGAGG00000011652	VARS2	99	61.476	Gopherus_agassizii
ENSCJAG00000019826	VARS2	100	94.262	ENSGGOG00000014587	VARS2	100	94.262	Gorilla_gorilla
ENSCJAG00000019826	VARS2	90	50.911	ENSHBUG00000002448	vars2	95	50.810	Haplochromis_burtoni
ENSCJAG00000019826	VARS2	99	83.223	ENSHGLG00000012886	VARS2	98	82.255	Heterocephalus_glaber_female
ENSCJAG00000019826	VARS2	99	83.129	ENSHGLG00100016535	VARS2	99	83.129	Heterocephalus_glaber_male
ENSCJAG00000019826	VARS2	69	48.865	ENSHCOG00000017907	vars2	94	50.845	Hippocampus_comes
ENSCJAG00000019826	VARS2	91	54.335	ENSIPUG00000015573	Vars2	98	52.170	Ictalurus_punctatus
ENSCJAG00000019826	VARS2	100	88.252	ENSSTOG00000009924	VARS2	100	88.252	Ictidomys_tridecemlineatus
ENSCJAG00000019826	VARS2	99	83.176	ENSJJAG00000011144	Vars2	99	83.176	Jaculus_jaculus
ENSCJAG00000019826	VARS2	93	50.918	ENSKMAG00000001393	vars2	97	50.187	Kryptolebias_marmoratus
ENSCJAG00000019826	VARS2	95	50.672	ENSLBEG00000011949	vars2	97	50.284	Labrus_bergylta
ENSCJAG00000019826	VARS2	52	62.162	ENSLBEG00000005480	-	82	61.691	Labrus_bergylta
ENSCJAG00000019826	VARS2	95	52.229	ENSLACG00000001576	-	99	52.326	Latimeria_chalumnae
ENSCJAG00000019826	VARS2	99	85.782	ENSLAFG00000015183	VARS2	99	85.782	Loxodonta_africana
ENSCJAG00000019826	VARS2	100	93.979	ENSMFAG00000042367	VARS2	100	93.979	Macaca_fascicularis
ENSCJAG00000019826	VARS2	100	93.979	ENSMMUG00000018609	VARS2	100	93.979	Macaca_mulatta
ENSCJAG00000019826	VARS2	100	93.885	ENSMNEG00000043163	VARS2	100	93.885	Macaca_nemestrina
ENSCJAG00000019826	VARS2	100	94.638	ENSMLEG00000041728	VARS2	100	94.328	Mandrillus_leucophaeus
ENSCJAG00000019826	VARS2	96	50.000	ENSMAMG00000020339	vars2	97	49.623	Mastacembelus_armatus
ENSCJAG00000019826	VARS2	97	49.673	ENSMZEG00005017669	vars2	99	49.579	Maylandia_zebra
ENSCJAG00000019826	VARS2	99	82.032	ENSMAUG00000018946	Vars2	100	82.032	Mesocricetus_auratus
ENSCJAG00000019826	VARS2	84	91.368	ENSMICG00000005365	VARS2	100	91.368	Microcebus_murinus
ENSCJAG00000019826	VARS2	94	84.727	ENSMOCG00000014607	Vars2	100	84.727	Microtus_ochrogaster
ENSCJAG00000019826	VARS2	92	51.006	ENSMMOG00000012122	vars2	96	49.516	Mola_mola
ENSCJAG00000019826	VARS2	99	75.024	ENSMODG00000015848	VARS2	99	75.024	Monodelphis_domestica
ENSCJAG00000019826	VARS2	93	51.900	ENSMALG00000009217	vars2	98	51.800	Monopterus_albus
ENSCJAG00000019826	VARS2	99	83.145	MGP_CAROLIEiJ_G0021529	Vars2	100	83.145	Mus_caroli
ENSCJAG00000019826	VARS2	99	83.145	ENSMUSG00000038838	Vars2	100	83.145	Mus_musculus
ENSCJAG00000019826	VARS2	99	83.710	MGP_PahariEiJ_G0020523	Vars2	100	83.710	Mus_pahari
ENSCJAG00000019826	VARS2	99	83.051	MGP_SPRETEiJ_G0022436	Vars2	100	83.051	Mus_spretus
ENSCJAG00000019826	VARS2	99	86.535	ENSMPUG00000011643	VARS2	100	86.535	Mustela_putorius_furo
ENSCJAG00000019826	VARS2	99	83.052	ENSMLUG00000002356	VARS2	97	83.052	Myotis_lucifugus
ENSCJAG00000019826	VARS2	98	76.938	ENSNGAG00000020607	Vars2	100	76.294	Nannospalax_galili
ENSCJAG00000019826	VARS2	61	48.485	ENSNBRG00000001624	vars2	57	49.724	Neolamprologus_brichardi
ENSCJAG00000019826	VARS2	100	90.338	ENSNLEG00000005625	VARS2	100	89.872	Nomascus_leucogenys
ENSCJAG00000019826	VARS2	78	73.333	ENSMEUG00000014475	VARS2	90	73.333	Notamacropus_eugenii
ENSCJAG00000019826	VARS2	90	83.628	ENSOPRG00000000682	VARS2	90	83.628	Ochotona_princeps
ENSCJAG00000019826	VARS2	99	82.892	ENSODEG00000017965	VARS2	99	82.892	Octodon_degus
ENSCJAG00000019826	VARS2	92	36.735	ENSONIG00000004734	vars2	99	36.954	Oreochromis_niloticus
ENSCJAG00000019826	VARS2	81	61.663	ENSOANG00000000398	-	99	61.432	Ornithorhynchus_anatinus
ENSCJAG00000019826	VARS2	99	79.870	ENSOCUG00000021496	VARS2	66	79.034	Oryctolagus_cuniculus
ENSCJAG00000019826	VARS2	92	52.273	ENSORLG00000010632	vars2	94	51.431	Oryzias_latipes
ENSCJAG00000019826	VARS2	92	52.273	ENSORLG00020018584	vars2	96	51.196	Oryzias_latipes_hni
ENSCJAG00000019826	VARS2	92	52.174	ENSORLG00015010408	vars2	96	50.856	Oryzias_latipes_hsok
ENSCJAG00000019826	VARS2	92	52.825	ENSOMEG00000008360	vars2	96	51.382	Oryzias_melastigma
ENSCJAG00000019826	VARS2	100	89.024	ENSOGAG00000006087	VARS2	100	88.230	Otolemur_garnettii
ENSCJAG00000019826	VARS2	99	86.825	ENSOARG00000010844	VARS2	99	86.047	Ovis_aries
ENSCJAG00000019826	VARS2	100	94.167	ENSPPAG00000041141	VARS2	100	94.167	Pan_paniscus
ENSCJAG00000019826	VARS2	99	86.566	ENSPPRG00000006751	VARS2	99	85.635	Panthera_pardus
ENSCJAG00000019826	VARS2	99	86.471	ENSPTIG00000017799	VARS2	98	87.702	Panthera_tigris_altaica
ENSCJAG00000019826	VARS2	100	94.167	ENSPTRG00000034497	VARS2	100	94.167	Pan_troglodytes
ENSCJAG00000019826	VARS2	100	94.262	ENSPANG00000018481	VARS2	100	94.477	Papio_anubis
ENSCJAG00000019826	VARS2	95	53.914	ENSPKIG00000011372	vars2	98	53.220	Paramormyrops_kingsleyae
ENSCJAG00000019826	VARS2	59	65.984	ENSPSIG00000006206	VARS2	92	65.741	Pelodiscus_sinensis
ENSCJAG00000019826	VARS2	96	51.610	ENSPMGG00000000465	vars2	97	51.518	Periophthalmus_magnuspinnatus
ENSCJAG00000019826	VARS2	99	83.051	ENSPEMG00000014691	Vars2	100	83.051	Peromyscus_maniculatus_bairdii
ENSCJAG00000019826	VARS2	99	76.632	ENSPCIG00000015040	VARS2	99	76.632	Phascolarctos_cinereus
ENSCJAG00000019826	VARS2	92	51.786	ENSPFOG00000017616	vars2	98	50.141	Poecilia_formosa
ENSCJAG00000019826	VARS2	92	51.434	ENSPLAG00000019778	vars2	96	50.435	Poecilia_latipinna
ENSCJAG00000019826	VARS2	92	51.533	ENSPMEG00000011123	vars2	96	50.531	Poecilia_mexicana
ENSCJAG00000019826	VARS2	89	47.363	ENSPREG00000014998	vars2	94	45.954	Poecilia_reticulata
ENSCJAG00000019826	VARS2	100	94.262	ENSPPYG00000016424	VARS2	100	94.262	Pongo_abelii
ENSCJAG00000019826	VARS2	84	80.723	ENSPCAG00000006946	VARS2	84	80.723	Procavia_capensis
ENSCJAG00000019826	VARS2	99	88.889	ENSPCOG00000014839	VARS2	99	88.187	Propithecus_coquereli
ENSCJAG00000019826	VARS2	100	86.842	ENSPVAG00000004197	VARS2	99	86.842	Pteropus_vampyrus
ENSCJAG00000019826	VARS2	82	58.065	ENSPNYG00000010314	vars2	97	58.065	Pundamilia_nyererei
ENSCJAG00000019826	VARS2	95	53.122	ENSPNAG00000026793	vars2	96	52.841	Pygocentrus_nattereri
ENSCJAG00000019826	VARS2	99	83.333	ENSRNOG00000000833	Vars2	100	83.333	Rattus_norvegicus
ENSCJAG00000019826	VARS2	100	93.791	ENSRBIG00000032725	VARS2	100	93.791	Rhinopithecus_bieti
ENSCJAG00000019826	VARS2	100	93.885	ENSRROG00000043847	VARS2	100	93.885	Rhinopithecus_roxellana
ENSCJAG00000019826	VARS2	100	94.747	ENSSBOG00000033240	VARS2	100	94.260	Saimiri_boliviensis_boliviensis
ENSCJAG00000019826	VARS2	99	75.118	ENSSHAG00000009307	VARS2	100	75.118	Sarcophilus_harrisii
ENSCJAG00000019826	VARS2	96	52.232	ENSSFOG00015016187	vars2	96	51.947	Scleropages_formosus
ENSCJAG00000019826	VARS2	93	52.024	ENSSMAG00000020842	vars2	97	51.437	Scophthalmus_maximus
ENSCJAG00000019826	VARS2	93	51.373	ENSSDUG00000011598	vars2	97	50.425	Seriola_dumerili
ENSCJAG00000019826	VARS2	91	51.689	ENSSLDG00000015492	vars2	97	49.952	Seriola_lalandi_dorsalis
ENSCJAG00000019826	VARS2	57	89.051	ENSSARG00000003786	-	70	89.051	Sorex_araneus
ENSCJAG00000019826	VARS2	88	59.188	ENSSPUG00000014700	VARS2	94	59.081	Sphenodon_punctatus
ENSCJAG00000019826	VARS2	93	49.304	ENSSPAG00000004654	vars2	97	48.138	Stegastes_partitus
ENSCJAG00000019826	VARS2	99	87.194	ENSSSCG00000001384	VARS2	100	87.194	Sus_scrofa
ENSCJAG00000019826	VARS2	93	52.711	ENSTRUG00000005264	vars2	99	51.289	Takifugu_rubripes
ENSCJAG00000019826	VARS2	99	50.560	ENSTNIG00000005916	vars2	99	50.698	Tetraodon_nigroviridis
ENSCJAG00000019826	VARS2	52	92.537	ENSTBEG00000007976	-	53	92.537	Tupaia_belangeri
ENSCJAG00000019826	VARS2	100	75.376	ENSTTRG00000012243	VARS2	100	75.376	Tursiops_truncatus
ENSCJAG00000019826	VARS2	99	85.795	ENSUAMG00000026124	VARS2	100	87.202	Ursus_americanus
ENSCJAG00000019826	VARS2	99	86.817	ENSUMAG00000019894	VARS2	100	86.817	Ursus_maritimus
ENSCJAG00000019826	VARS2	99	85.499	ENSVVUG00000010754	VARS2	95	85.499	Vulpes_vulpes
ENSCJAG00000019826	VARS2	89	54.517	ENSXETG00000003036	vars2	99	54.517	Xenopus_tropicalis
ENSCJAG00000019826	VARS2	89	53.021	ENSXCOG00000003455	vars2	95	51.610	Xiphophorus_couchianus
ENSCJAG00000019826	VARS2	92	51.239	ENSXMAG00000013523	vars2	96	49.952	Xiphophorus_maculatus