EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000019859 (Gene tree)
Gene ID: 100385854
Gene Symbol: ZNF408
Alias: FLJ12827
Full Name: zinc finger protein 408
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 5468 bases
Position: chrNTIC01001113.1:106900970-106906437
Accession: 100385854
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000036913	zf-C2H2	PF00096.26	1.1e-37	1	7
ENSCJAP00000036913	zf-C2H2	PF00096.26	1.1e-37	2	7
ENSCJAP00000036913	zf-C2H2	PF00096.26	1.1e-37	3	7
ENSCJAP00000036913	zf-C2H2	PF00096.26	1.1e-37	4	7
ENSCJAP00000036913	zf-C2H2	PF00096.26	1.1e-37	5	7
ENSCJAP00000036913	zf-C2H2	PF00096.26	1.1e-37	6	7
ENSCJAP00000036913	zf-C2H2	PF00096.26	1.1e-37	7	7
ENSCJAP00000036913	zf-met	PF12874.7	2.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000038985	ZNF408-201	2163	XM_009008035	ENSCJAP00000036913	720 (aa)	XP_002755266	F6RDZ3

Gene Model

Click here to download ENSCJAG00000019859's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000019859's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000019859	ZNF408	54	40.909	ENSCJAG00000002084	ZNF577	60	38.991
ENSCJAG00000019859	ZNF408	58	43.860	ENSCJAG00000018930	ZNF2	88	45.860
ENSCJAG00000019859	ZNF408	69	38.596	ENSCJAG00000048658	ZNF225	98	38.571
ENSCJAG00000019859	ZNF408	51	37.102	ENSCJAG00000018246	-	67	42.920
ENSCJAG00000019859	ZNF408	51	40.000	ENSCJAG00000008039	ZNF236	59	36.449

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000019859	ZNF408	99	90.141	ENSG00000175213	ZNF408	99	90.141	Homo_sapiens
ENSCJAG00000019859	ZNF408	100	79.614	ENSAMEG00000006904	ZNF408	98	80.056	Ailuropoda_melanoleuca
ENSCJAG00000019859	ZNF408	99	88.655	ENSANAG00000036294	ZNF408	93	96.890	Aotus_nancymaae
ENSCJAG00000019859	ZNF408	90	39.373	ENSAMXG00000032642	znf408	91	40.364	Astyanax_mexicanus
ENSCJAG00000019859	ZNF408	100	80.822	ENSCAFG00000009143	ZNF408	95	81.145	Canis_familiaris
ENSCJAG00000019859	ZNF408	100	80.822	ENSCAFG00020019155	ZNF408	95	81.145	Canis_lupus_dingo
ENSCJAG00000019859	ZNF408	82	77.852	ENSCHIG00000025346	ZNF408	97	77.852	Capra_hircus
ENSCJAG00000019859	ZNF408	100	80.278	ENSTSYG00000025443	ZNF408	98	80.367	Carlito_syrichta
ENSCJAG00000019859	ZNF408	99	95.211	ENSCCAG00000029472	ZNF408	99	95.211	Cebus_capucinus
ENSCJAG00000019859	ZNF408	55	96.907	ENSCHOG00000009909	ZNF408	75	96.907	Choloepus_hoffmanni
ENSCJAG00000019859	ZNF408	100	69.114	ENSCGRG00001023588	Zfp408	99	69.155	Cricetulus_griseus_chok1gshd
ENSCJAG00000019859	ZNF408	100	69.114	ENSCGRG00000017618	Zfp408	99	69.155	Cricetulus_griseus_crigri
ENSCJAG00000019859	ZNF408	100	76.902	ENSDNOG00000047669	ZNF408	98	77.311	Dasypus_novemcinctus
ENSCJAG00000019859	ZNF408	99	70.827	ENSDORG00000000387	Zfp408	98	71.449	Dipodomys_ordii
ENSCJAG00000019859	ZNF408	89	63.251	ENSETEG00000017621	-	95	66.983	Echinops_telfairi
ENSCJAG00000019859	ZNF408	100	80.303	ENSEASG00005015461	ZNF408	98	80.758	Equus_asinus_asinus
ENSCJAG00000019859	ZNF408	100	80.028	ENSECAG00000010878	ZNF408	98	80.478	Equus_caballus
ENSCJAG00000019859	ZNF408	94	69.661	ENSEEUG00000010466	ZNF408	93	69.527	Erinaceus_europaeus
ENSCJAG00000019859	ZNF408	100	80.972	ENSFCAG00000029105	ZNF408	99	80.986	Felis_catus
ENSCJAG00000019859	ZNF408	84	37.386	ENSFHEG00000016754	-	78	38.522	Fundulus_heteroclitus
ENSCJAG00000019859	ZNF408	93	36.228	ENSGAFG00000018557	-	81	39.737	Gambusia_affinis
ENSCJAG00000019859	ZNF408	99	90.000	ENSGGOG00000010152	ZNF408	99	90.000	Gorilla_gorilla
ENSCJAG00000019859	ZNF408	86	79.454	ENSLAFG00000027848	ZNF408	99	80.097	Loxodonta_africana
ENSCJAG00000019859	ZNF408	98	85.149	ENSMICG00000045320	ZNF408	98	85.149	Microcebus_murinus
ENSCJAG00000019859	ZNF408	73	53.525	ENSMODG00000019895	-	84	52.250	Monodelphis_domestica
ENSCJAG00000019859	ZNF408	98	81.039	ENSMPUG00000005490	ZNF408	98	80.812	Mustela_putorius_furo
ENSCJAG00000019859	ZNF408	99	71.448	ENSNGAG00000000309	Zfp408	98	71.105	Nannospalax_galili
ENSCJAG00000019859	ZNF408	100	89.306	ENSNLEG00000014132	ZNF408	99	89.296	Nomascus_leucogenys
ENSCJAG00000019859	ZNF408	99	64.804	ENSOPRG00000009225	ZNF408	95	66.568	Ochotona_princeps
ENSCJAG00000019859	ZNF408	100	78.056	ENSOCUG00000010953	ZNF408	98	78.797	Oryctolagus_cuniculus
ENSCJAG00000019859	ZNF408	86	84.603	ENSOGAG00000034080	ZNF408	100	84.603	Otolemur_garnettii
ENSCJAG00000019859	ZNF408	99	90.282	ENSPPAG00000034993	ZNF408	99	90.282	Pan_paniscus
ENSCJAG00000019859	ZNF408	100	81.250	ENSPPRG00000016866	ZNF408	99	81.268	Panthera_pardus
ENSCJAG00000019859	ZNF408	100	80.579	ENSPTIG00000015467	ZNF408	99	80.726	Panthera_tigris_altaica
ENSCJAG00000019859	ZNF408	99	90.282	ENSPTRG00000003551	ZNF408	99	90.282	Pan_troglodytes
ENSCJAG00000019859	ZNF408	77	71.712	ENSPEMG00000016757	Zfp408	99	71.532	Peromyscus_maniculatus_bairdii
ENSCJAG00000019859	ZNF408	93	36.499	ENSPFOG00000001760	-	92	48.556	Poecilia_formosa
ENSCJAG00000019859	ZNF408	82	46.032	ENSPLAG00000019895	-	99	45.455	Poecilia_latipinna
ENSCJAG00000019859	ZNF408	52	49.867	ENSPMEG00000021147	-	72	49.602	Poecilia_mexicana
ENSCJAG00000019859	ZNF408	93	36.290	ENSPREG00000017068	-	99	35.618	Poecilia_reticulata
ENSCJAG00000019859	ZNF408	99	88.310	ENSPPYG00000003318	ZNF408	99	89.482	Pongo_abelii
ENSCJAG00000019859	ZNF408	100	75.556	ENSPCAG00000014001	ZNF408	98	75.847	Procavia_capensis
ENSCJAG00000019859	ZNF408	98	84.626	ENSPCOG00000028698	ZNF408	98	84.626	Propithecus_coquereli
ENSCJAG00000019859	ZNF408	98	80.845	ENSPVAG00000015791	ZNF408	99	79.552	Pteropus_vampyrus
ENSCJAG00000019859	ZNF408	99	93.662	ENSSBOG00000033023	ZNF408	99	93.662	Saimiri_boliviensis_boliviensis
ENSCJAG00000019859	ZNF408	100	79.752	ENSSSCG00000023097	ZNF408	96	79.749	Sus_scrofa
ENSCJAG00000019859	ZNF408	76	91.700	ENSTBEG00000004260	ZNF408	81	91.700	Tupaia_belangeri
ENSCJAG00000019859	ZNF408	100	79.752	ENSUAMG00000026154	ZNF408	99	79.888	Ursus_americanus
ENSCJAG00000019859	ZNF408	100	79.477	ENSUMAG00000014405	ZNF408	99	79.609	Ursus_maritimus
ENSCJAG00000019859	ZNF408	100	80.548	ENSVVUG00000026805	ZNF408	95	80.726	Vulpes_vulpes
ENSCJAG00000019859	ZNF408	52	54.881	ENSXETG00000001980	znf408	100	53.562	Xenopus_tropicalis
ENSCJAG00000019859	ZNF408	67	44.172	ENSXCOG00000002869	-	90	43.210	Xiphophorus_couchianus
ENSCJAG00000019859	ZNF408	51	49.596	ENSXMAG00000018347	-	70	49.326	Xiphophorus_maculatus