EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000019885 (Gene tree)
Gene ID: 100397437
Gene Symbol: ZNF500
Alias: KIAA0557|ZKSCAN18|ZSCAN50
Full Name: zinc finger protein 500
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 12291 bases
Position: chrNTIC01004446.1:61651-73941
Accession: 100397437
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000059804	zf-C2H2	PF00096.26	5.4e-30	1	5
ENSCJAP00000059804	zf-C2H2	PF00096.26	5.4e-30	2	5
ENSCJAP00000059804	zf-C2H2	PF00096.26	5.4e-30	3	5
ENSCJAP00000059804	zf-C2H2	PF00096.26	5.4e-30	4	5
ENSCJAP00000059804	zf-C2H2	PF00096.26	5.4e-30	5	5
ENSCJAP00000051492	zf-C2H2	PF00096.26	3.6e-25	1	4
ENSCJAP00000051492	zf-C2H2	PF00096.26	3.6e-25	2	4
ENSCJAP00000051492	zf-C2H2	PF00096.26	3.6e-25	3	4
ENSCJAP00000051492	zf-C2H2	PF00096.26	3.6e-25	4	4
ENSCJAP00000059804	zf-met	PF12874.7	7.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000061275	ZNF500-201	1326	-	ENSCJAP00000051492	441 (aa)	-	F7A0B5
ENSCJAT00000074381	ZNF500-202	1443	-	ENSCJAP00000059804	480 (aa)	XP_002755905	F6Q7P6

Gene Model

Click here to download ENSCJAG00000019885's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000019885's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000019885	ZNF500	53	53.333	ENSCJAG00000018930	ZNF2	99	52.874
ENSCJAG00000019885	ZNF500	50	54.545	ENSCJAG00000045776	ZNF564	96	54.545
ENSCJAG00000019885	ZNF500	59	54.717	ENSCJAG00000043982	ZNF574	67	54.128
ENSCJAG00000019885	ZNF500	50	53.103	ENSCJAG00000011738	ZNF670	99	53.103
ENSCJAG00000019885	ZNF500	54	56.250	ENSCJAG00000006214	ZNF317	94	56.250
ENSCJAG00000019885	ZNF500	50	55.245	ENSCJAG00000009497	ZNF850	99	55.245
ENSCJAG00000019885	ZNF500	50	58.333	ENSCJAG00000046843	ZNF418	99	58.333
ENSCJAG00000019885	ZNF500	50	54.861	ENSCJAG00000048658	ZNF225	97	54.861
ENSCJAG00000019885	ZNF500	50	58.730	ENSCJAG00000014349	ZFP1	99	58.730
ENSCJAG00000019885	ZNF500	55	54.167	ENSCJAG00000002084	ZNF577	79	54.167

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000019885	ZNF500	53	64.479	ENSCAFG00000023007	-	84	64.202	Canis_familiaris
ENSCJAG00000019885	ZNF500	53	64.479	ENSCAFG00020024945	-	84	64.202	Canis_lupus_dingo
ENSCJAG00000019885	ZNF500	89	56.322	ENSGAGG00000006848	-	98	56.322	Gopherus_agassizii
ENSCJAG00000019885	ZNF500	74	60.804	ENSMEUG00000015316	-	74	60.804	Notamacropus_eugenii
ENSCJAG00000019885	ZNF500	89	57.895	ENSPSIG00000016033	-	97	57.895	Pelodiscus_sinensis