EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000019911 (Gene tree)
Gene ID: -
Gene Symbol: CPSF4L
Alias: -
Full Name: cleavage and polyadenylation specific factor 4 like
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 13205 bases
Position: chrNTIC01034389.1:122525505-122538709
Accession: 33632
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000053011	zf-CCCH	PF00642.24	7e-10	1	1
ENSCJAP00000037016	zf-CCCH	PF00642.24	1.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000039094	CPSF4L-201	486	-	ENSCJAP00000037016	162 (aa)	-	F6ZK54
ENSCJAT00000075272	CPSF4L-202	420	-	ENSCJAP00000053011	139 (aa)	-	A0A2R8M373

Gene Model

Click here to download ENSCJAG00000019911's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000019911's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000019911	CPSF4L	92	54.839	ENSCJAG00000015826	CPSF4	58	54.839

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000019911	CPSF4L	96	75.460	ENSG00000187959	CPSF4L	91	75.460	Homo_sapiens
ENSCJAG00000019911	CPSF4L	95	65.432	ENSAMEG00000002707	CPSF4L	59	65.432	Ailuropoda_melanoleuca
ENSCJAG00000019911	CPSF4L	94	57.343	ENSANAG00000026558	-	98	57.343	Aotus_nancymaae
ENSCJAG00000019911	CPSF4L	96	74.847	ENSCATG00000044555	CPSF4L	96	76.515	Cercocebus_atys
ENSCJAG00000019911	CPSF4L	96	72.561	ENSCSAG00000004429	CPSF4L	91	72.561	Chlorocebus_sabaeus
ENSCJAG00000019911	CPSF4L	96	73.620	ENSCANG00000035042	CPSF4L	91	73.620	Colobus_angolensis_palliatus
ENSCJAG00000019911	CPSF4L	95	60.494	ENSCGRG00001020079	Cpsf4l	89	60.494	Cricetulus_griseus_chok1gshd
ENSCJAG00000019911	CPSF4L	95	60.494	ENSCGRG00000010419	Cpsf4l	89	60.494	Cricetulus_griseus_crigri
ENSCJAG00000019911	CPSF4L	90	67.320	ENSDNOG00000014458	CPSF4L	82	74.510	Dasypus_novemcinctus
ENSCJAG00000019911	CPSF4L	88	71.333	ENSEASG00005018763	CPSF4L	90	71.333	Equus_asinus_asinus
ENSCJAG00000019911	CPSF4L	88	71.333	ENSECAG00000024813	CPSF4L	90	71.333	Equus_caballus
ENSCJAG00000019911	CPSF4L	94	66.875	ENSFCAG00000004745	CPSF4L	63	66.875	Felis_catus
ENSCJAG00000019911	CPSF4L	96	76.687	ENSGGOG00000026659	CPSF4L	91	76.687	Gorilla_gorilla
ENSCJAG00000019911	CPSF4L	88	68.000	ENSSTOG00000001849	CPSF4L	86	68.000	Ictidomys_tridecemlineatus
ENSCJAG00000019911	CPSF4L	95	63.580	ENSLAFG00000010697	CPSF4L	90	63.580	Loxodonta_africana
ENSCJAG00000019911	CPSF4L	96	74.847	ENSMFAG00000037840	CPSF4L	96	74.074	Macaca_fascicularis
ENSCJAG00000019911	CPSF4L	96	74.847	ENSMMUG00000001271	CPSF4L	96	74.074	Macaca_mulatta
ENSCJAG00000019911	CPSF4L	96	74.847	ENSMNEG00000045419	CPSF4L	96	74.074	Macaca_nemestrina
ENSCJAG00000019911	CPSF4L	96	74.233	ENSMLEG00000038527	CPSF4L	96	73.333	Mandrillus_leucophaeus
ENSCJAG00000019911	CPSF4L	88	63.087	ENSMAUG00000019519	-	90	63.087	Mesocricetus_auratus
ENSCJAG00000019911	CPSF4L	94	72.327	ENSMICG00000007503	CPSF4L	88	72.327	Microcebus_murinus
ENSCJAG00000019911	CPSF4L	69	60.504	ENSMOCG00000015313	-	81	60.504	Microtus_ochrogaster
ENSCJAG00000019911	CPSF4L	88	60.403	ENSMODG00000025672	CPSF4L	92	60.403	Monodelphis_domestica
ENSCJAG00000019911	CPSF4L	91	56.024	MGP_CAROLIEiJ_G0017369	-	73	58.929	Mus_caroli
ENSCJAG00000019911	CPSF4L	87	59.732	ENSMUSG00000018727	Cpsf4l	73	58.929	Mus_musculus
ENSCJAG00000019911	CPSF4L	75	60.748	MGP_PahariEiJ_G0018499	-	82	56.000	Mus_pahari
ENSCJAG00000019911	CPSF4L	77	57.273	MGP_SPRETEiJ_G0018215	-	82	54.400	Mus_spretus
ENSCJAG00000019911	CPSF4L	91	67.949	ENSMPUG00000014276	CPSF4L	90	70.199	Mustela_putorius_furo
ENSCJAG00000019911	CPSF4L	96	61.963	ENSMLUG00000009617	CPSF4L	91	61.963	Myotis_lucifugus
ENSCJAG00000019911	CPSF4L	94	62.500	ENSNGAG00000009325	-	90	62.500	Nannospalax_galili
ENSCJAG00000019911	CPSF4L	96	76.074	ENSNLEG00000001420	CPSF4L	91	76.074	Nomascus_leucogenys
ENSCJAG00000019911	CPSF4L	71	64.706	ENSMEUG00000004051	-	100	64.706	Notamacropus_eugenii
ENSCJAG00000019911	CPSF4L	87	62.903	ENSOPRG00000007484	-	88	62.903	Ochotona_princeps
ENSCJAG00000019911	CPSF4L	96	60.248	ENSOCUG00000026495	CPSF4L	72	60.248	Oryctolagus_cuniculus
ENSCJAG00000019911	CPSF4L	94	72.059	ENSPPAG00000037000	-	100	74.324	Pan_paniscus
ENSCJAG00000019911	CPSF4L	81	70.690	ENSPPRG00000001058	CPSF4L	76	70.690	Panthera_pardus
ENSCJAG00000019911	CPSF4L	81	70.690	ENSPTIG00000012676	CPSF4L	76	70.690	Panthera_tigris_altaica
ENSCJAG00000019911	CPSF4L	96	75.460	ENSPTRG00000009598	CPSF4L	91	75.460	Pan_troglodytes
ENSCJAG00000019911	CPSF4L	96	74.233	ENSPANG00000020331	CPSF4L	91	74.233	Papio_anubis
ENSCJAG00000019911	CPSF4L	92	58.683	ENSPEMG00000011680	Cpsf4l	92	49.286	Peromyscus_maniculatus_bairdii
ENSCJAG00000019911	CPSF4L	92	60.897	ENSPCIG00000001889	CPSF4L	91	60.897	Phascolarctos_cinereus
ENSCJAG00000019911	CPSF4L	94	72.794	ENSPPYG00000008589	-	89	72.794	Pongo_abelii
ENSCJAG00000019911	CPSF4L	85	75.172	ENSPCOG00000021801	CPSF4L	97	68.794	Propithecus_coquereli
ENSCJAG00000019911	CPSF4L	94	62.963	ENSPVAG00000006736	CPSF4L	91	62.963	Pteropus_vampyrus
ENSCJAG00000019911	CPSF4L	96	73.006	ENSRBIG00000029048	CPSF4L	91	73.006	Rhinopithecus_bieti
ENSCJAG00000019911	CPSF4L	96	72.393	ENSRROG00000037051	CPSF4L	91	72.393	Rhinopithecus_roxellana
ENSCJAG00000019911	CPSF4L	51	67.568	ENSTBEG00000012716	-	92	68.675	Tupaia_belangeri
ENSCJAG00000019911	CPSF4L	96	64.029	ENSTTRG00000005243	CPSF4L	92	64.029	Tursiops_truncatus
ENSCJAG00000019911	CPSF4L	69	69.748	ENSUAMG00000007728	CPSF4L	75	69.748	Ursus_americanus
ENSCJAG00000019911	CPSF4L	69	69.748	ENSUMAG00000007869	CPSF4L	75	69.748	Ursus_maritimus