EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000020114 (Gene tree)
Gene ID: 100390351
Gene Symbol: R3HDM4
Alias: C19orf22|MGC16353
Full Name: R3H domain containing 4
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 11970 bases
Position: chrNTIC01005224.1:29700-41669
Accession: 28270
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000037387	R3H	PF01424.22	1e-06	1	1
ENSCJAP00000037385	R3H	PF01424.22	1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000039494	R3HDM4-201	807	-	ENSCJAP00000037385	268 (aa)	-	F6YGG0
ENSCJAT00000039496	R3HDM4-202	807	-	ENSCJAP00000037387	268 (aa)	-	F6YGD3

Gene Model

Click here to download ENSCJAG00000020114's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000020114's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000020114	R3HDM4	93	95.618	ENSG00000198858	R3HDM4	94	95.618	Homo_sapiens
ENSCJAG00000020114	R3HDM4	91	91.358	ENSAMEG00000003001	R3HDM4	99	91.358	Ailuropoda_melanoleuca
ENSCJAG00000020114	R3HDM4	92	55.645	ENSACIG00000004672	r3hdm4	93	55.645	Amphilophus_citrinellus
ENSCJAG00000020114	R3HDM4	91	52.653	ENSATEG00000015913	r3hdm4	91	54.894	Anabas_testudineus
ENSCJAG00000020114	R3HDM4	91	98.765	ENSANAG00000029748	R3HDM4	100	98.765	Aotus_nancymaae
ENSCJAG00000020114	R3HDM4	93	92.829	ENSBTAG00000046406	R3HDM4	92	92.829	Bos_taurus
ENSCJAG00000020114	R3HDM4	93	92.032	ENSCAFG00000019665	R3HDM4	92	92.032	Canis_familiaris
ENSCJAG00000020114	R3HDM4	93	91.633	ENSCAFG00020016880	R3HDM4	92	91.633	Canis_lupus_dingo
ENSCJAG00000020114	R3HDM4	94	92.430	ENSCHIG00000020110	R3HDM4	97	92.430	Capra_hircus
ENSCJAG00000020114	R3HDM4	100	91.791	ENSCCAG00000019955	R3HDM4	89	97.951	Cebus_capucinus
ENSCJAG00000020114	R3HDM4	97	90.114	ENSCATG00000037269	R3HDM4	97	90.494	Cercocebus_atys
ENSCJAG00000020114	R3HDM4	91	91.358	ENSCLAG00000007094	R3HDM4	99	91.358	Chinchilla_lanigera
ENSCJAG00000020114	R3HDM4	97	90.805	ENSCSAG00000012574	R3HDM4	97	90.805	Chlorocebus_sabaeus
ENSCJAG00000020114	R3HDM4	98	67.681	ENSCPBG00000009805	R3HDM4	99	67.681	Chrysemys_picta_bellii
ENSCJAG00000020114	R3HDM4	91	95.062	ENSCANG00000040439	R3HDM4	93	88.722	Colobus_angolensis_palliatus
ENSCJAG00000020114	R3HDM4	93	84.861	ENSCGRG00001021650	R3hdm4	95	86.853	Cricetulus_griseus_chok1gshd
ENSCJAG00000020114	R3HDM4	93	84.861	ENSCGRG00000013169	R3hdm4	95	86.853	Cricetulus_griseus_crigri
ENSCJAG00000020114	R3HDM4	92	53.012	ENSCSEG00000018211	r3hdm4	93	53.012	Cynoglossus_semilaevis
ENSCJAG00000020114	R3HDM4	98	53.208	ENSCVAG00000017127	r3hdm4	99	54.340	Cyprinodon_variegatus
ENSCJAG00000020114	R3HDM4	95	88.281	ENSDORG00000006605	R3hdm4	99	91.393	Dipodomys_ordii
ENSCJAG00000020114	R3HDM4	91	93.004	ENSEASG00005021556	R3HDM4	88	93.004	Equus_asinus_asinus
ENSCJAG00000020114	R3HDM4	92	92.308	ENSECAG00000000003	R3HDM4	97	89.015	Equus_caballus
ENSCJAG00000020114	R3HDM4	97	88.973	ENSFCAG00000042437	R3HDM4	97	88.973	Felis_catus
ENSCJAG00000020114	R3HDM4	91	69.136	ENSFALG00000013938	R3HDM4	100	69.136	Ficedula_albicollis
ENSCJAG00000020114	R3HDM4	91	89.754	ENSFDAG00000017040	R3HDM4	99	89.754	Fukomys_damarensis
ENSCJAG00000020114	R3HDM4	92	56.627	ENSFHEG00000017636	r3hdm4	93	56.627	Fundulus_heteroclitus
ENSCJAG00000020114	R3HDM4	92	51.613	ENSGMOG00000001231	r3hdm4	98	51.807	Gadus_morhua
ENSCJAG00000020114	R3HDM4	90	67.769	ENSGALG00000001998	R3HDM4	91	67.769	Gallus_gallus
ENSCJAG00000020114	R3HDM4	92	56.855	ENSGAFG00000004173	r3hdm4	93	56.855	Gambusia_affinis
ENSCJAG00000020114	R3HDM4	95	67.308	ENSGAGG00000019698	R3HDM4	98	67.308	Gopherus_agassizii
ENSCJAG00000020114	R3HDM4	91	96.708	ENSGGOG00000008040	R3HDM4	99	96.708	Gorilla_gorilla
ENSCJAG00000020114	R3HDM4	92	55.422	ENSHBUG00000014810	r3hdm4	93	56.627	Haplochromis_burtoni
ENSCJAG00000020114	R3HDM4	93	88.048	ENSHGLG00000016194	R3HDM4	97	85.496	Heterocephalus_glaber_female
ENSCJAG00000020114	R3HDM4	92	54.251	ENSHCOG00000008422	r3hdm4	91	55.274	Hippocampus_comes
ENSCJAG00000020114	R3HDM4	92	56.855	ENSIPUG00000006716	r3hdm4	92	56.855	Ictalurus_punctatus
ENSCJAG00000020114	R3HDM4	91	89.712	ENSSTOG00000023015	R3HDM4	99	89.712	Ictidomys_tridecemlineatus
ENSCJAG00000020114	R3HDM4	93	89.641	ENSJJAG00000012475	R3hdm4	94	89.641	Jaculus_jaculus
ENSCJAG00000020114	R3HDM4	92	56.627	ENSKMAG00000005853	r3hdm4	93	56.627	Kryptolebias_marmoratus
ENSCJAG00000020114	R3HDM4	92	54.032	ENSLBEG00000000730	r3hdm4	93	54.032	Labrus_bergylta
ENSCJAG00000020114	R3HDM4	91	61.728	ENSLACG00000016445	R3HDM4	94	61.633	Latimeria_chalumnae
ENSCJAG00000020114	R3HDM4	89	58.824	ENSLOCG00000002423	r3hdm4	91	58.824	Lepisosteus_oculatus
ENSCJAG00000020114	R3HDM4	90	91.736	ENSLAFG00000017796	R3HDM4	93	91.736	Loxodonta_africana
ENSCJAG00000020114	R3HDM4	97	91.188	ENSMFAG00000044131	R3HDM4	97	91.188	Macaca_fascicularis
ENSCJAG00000020114	R3HDM4	92	88.710	ENSMMUG00000009682	R3HDM4	98	89.754	Macaca_mulatta
ENSCJAG00000020114	R3HDM4	91	95.473	ENSMNEG00000044115	R3HDM4	98	95.473	Macaca_nemestrina
ENSCJAG00000020114	R3HDM4	91	93.469	ENSMLEG00000035693	R3HDM4	90	93.878	Mandrillus_leucophaeus
ENSCJAG00000020114	R3HDM4	80	56.944	ENSMAMG00000005652	r3hdm4	84	56.944	Mastacembelus_armatus
ENSCJAG00000020114	R3HDM4	95	82.879	ENSMAUG00000010611	R3hdm4	99	84.825	Mesocricetus_auratus
ENSCJAG00000020114	R3HDM4	94	91.270	ENSMICG00000010124	R3HDM4	93	91.270	Microcebus_murinus
ENSCJAG00000020114	R3HDM4	93	85.200	ENSMOCG00000002646	R3hdm4	95	85.600	Microtus_ochrogaster
ENSCJAG00000020114	R3HDM4	92	54.032	ENSMMOG00000008253	r3hdm4	92	55.042	Mola_mola
ENSCJAG00000020114	R3HDM4	87	66.810	ENSMODG00000005698	R3HDM4	100	66.810	Monodelphis_domestica
ENSCJAG00000020114	R3HDM4	92	54.435	ENSMALG00000018856	r3hdm4	91	55.462	Monopterus_albus
ENSCJAG00000020114	R3HDM4	93	85.600	MGP_CAROLIEiJ_G0015551	R3hdm4	92	87.705	Mus_caroli
ENSCJAG00000020114	R3HDM4	93	86.400	ENSMUSG00000035781	R3hdm4	92	88.525	Mus_musculus
ENSCJAG00000020114	R3HDM4	93	87.097	MGP_PahariEiJ_G0030964	R3hdm4	94	87.903	Mus_pahari
ENSCJAG00000020114	R3HDM4	93	86.400	MGP_SPRETEiJ_G0016369	-	78	88.525	Mus_spretus
ENSCJAG00000020114	R3HDM4	91	91.358	ENSMPUG00000009394	R3HDM4	90	91.358	Mustela_putorius_furo
ENSCJAG00000020114	R3HDM4	92	55.020	ENSNBRG00000004438	r3hdm4	93	56.225	Neolamprologus_brichardi
ENSCJAG00000020114	R3HDM4	84	94.372	ENSNLEG00000001022	R3HDM4	100	94.372	Nomascus_leucogenys
ENSCJAG00000020114	R3HDM4	88	66.667	ENSMEUG00000011020	R3HDM4	99	66.667	Notamacropus_eugenii
ENSCJAG00000020114	R3HDM4	97	86.486	ENSODEG00000011745	R3HDM4	97	86.486	Octodon_degus
ENSCJAG00000020114	R3HDM4	92	55.020	ENSONIG00000012675	r3hdm4	86	56.225	Oreochromis_niloticus
ENSCJAG00000020114	R3HDM4	92	56.225	ENSOMEG00000003005	r3hdm4	93	56.225	Oryzias_melastigma
ENSCJAG00000020114	R3HDM4	90	92.531	ENSOGAG00000025656	R3HDM4	91	92.531	Otolemur_garnettii
ENSCJAG00000020114	R3HDM4	91	93.827	ENSOARG00000009945	R3HDM4	99	93.827	Ovis_aries
ENSCJAG00000020114	R3HDM4	91	97.119	ENSPPAG00000042371	R3HDM4	99	97.119	Pan_paniscus
ENSCJAG00000020114	R3HDM4	97	91.188	ENSPANG00000015203	R3HDM4	97	91.188	Papio_anubis
ENSCJAG00000020114	R3HDM4	86	55.652	ENSPKIG00000007421	r3hdm4	88	55.556	Paramormyrops_kingsleyae
ENSCJAG00000020114	R3HDM4	92	51.807	ENSPMGG00000020467	r3hdm4	92	51.807	Periophthalmus_magnuspinnatus
ENSCJAG00000020114	R3HDM4	90	88.843	ENSPEMG00000008365	Tmem259	99	88.843	Peromyscus_maniculatus_bairdii
ENSCJAG00000020114	R3HDM4	92	56.048	ENSPFOG00000003199	r3hdm4	93	56.048	Poecilia_formosa
ENSCJAG00000020114	R3HDM4	92	55.645	ENSPMEG00000014183	r3hdm4	93	55.645	Poecilia_mexicana
ENSCJAG00000020114	R3HDM4	92	56.452	ENSPREG00000010709	r3hdm4	93	56.452	Poecilia_reticulata
ENSCJAG00000020114	R3HDM4	91	96.296	ENSPPYG00000009297	R3HDM4	91	96.296	Pongo_abelii
ENSCJAG00000020114	R3HDM4	56	91.447	ENSPCAG00000010997	R3HDM4	56	91.447	Procavia_capensis
ENSCJAG00000020114	R3HDM4	94	91.667	ENSPCOG00000016785	R3HDM4	93	91.667	Propithecus_coquereli
ENSCJAG00000020114	R3HDM4	92	55.422	ENSPNYG00000017489	r3hdm4	93	56.627	Pundamilia_nyererei
ENSCJAG00000020114	R3HDM4	93	85.887	ENSRNOG00000011489	R3hdm4	94	86.290	Rattus_norvegicus
ENSCJAG00000020114	R3HDM4	91	95.473	ENSRROG00000028842	R3HDM4	91	95.473	Rhinopithecus_roxellana
ENSCJAG00000020114	R3HDM4	91	95.968	ENSSBOG00000019298	R3HDM4	73	95.968	Saimiri_boliviensis_boliviensis
ENSCJAG00000020114	R3HDM4	54	72.603	ENSSHAG00000003036	-	100	72.603	Sarcophilus_harrisii
ENSCJAG00000020114	R3HDM4	88	56.303	ENSSFOG00015020574	r3hdm4	87	56.303	Scleropages_formosus
ENSCJAG00000020114	R3HDM4	92	55.823	ENSSMAG00000021090	r3hdm4	68	57.322	Scophthalmus_maximus
ENSCJAG00000020114	R3HDM4	92	57.028	ENSSDUG00000008488	r3hdm4	93	57.028	Seriola_dumerili
ENSCJAG00000020114	R3HDM4	92	57.028	ENSSLDG00000025328	r3hdm4	93	57.028	Seriola_lalandi_dorsalis
ENSCJAG00000020114	R3HDM4	92	69.512	ENSSPUG00000005434	R3HDM4	96	69.512	Sphenodon_punctatus
ENSCJAG00000020114	R3HDM4	91	54.286	ENSSPAG00000002562	r3hdm4	91	54.286	Stegastes_partitus
ENSCJAG00000020114	R3HDM4	95	91.765	ENSSSCG00000013419	R3HDM4	94	91.765	Sus_scrofa
ENSCJAG00000020114	R3HDM4	77	64.593	ENSTGUG00000000663	R3HDM4	100	64.593	Taeniopygia_guttata
ENSCJAG00000020114	R3HDM4	91	89.712	ENSTTRG00000001470	R3HDM4	99	90.123	Tursiops_truncatus
ENSCJAG00000020114	R3HDM4	83	92.377	ENSUAMG00000005751	R3HDM4	100	92.377	Ursus_americanus
ENSCJAG00000020114	R3HDM4	93	92.032	ENSVVUG00000022685	R3HDM4	92	92.032	Vulpes_vulpes
ENSCJAG00000020114	R3HDM4	89	46.694	ENSXETG00000033624	R3HDM4	92	46.694	Xenopus_tropicalis
ENSCJAG00000020114	R3HDM4	92	55.823	ENSXCOG00000005127	r3hdm4	93	55.823	Xiphophorus_couchianus
ENSCJAG00000020114	R3HDM4	92	56.048	ENSXMAG00000022875	r3hdm4	93	56.048	Xiphophorus_maculatus