EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000020118 (Gene tree)
Gene ID: -
Gene Symbol: R3HCC1
Alias: DKFZp564N123
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 9716 bases
Position: chrNTIC01003335.1:14918395-14928110
Accession: 27329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000037395	R3H	PF01424.22	4e-16	1	1
ENSCJAP00000037393	R3H	PF01424.22	6.4e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000039502	R3HCC1-201	1679	-	ENSCJAP00000037393	519 (aa)	-	F6XVT2
ENSCJAT00000039504	R3HCC1-202	1197	-	ENSCJAP00000037395	398 (aa)	-	F6XVP1

Gene Model

Click here to download ENSCJAG00000020118's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000020118's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000020118	R3HCC1	100	90.452	ENSG00000104679	R3HCC1	100	97.674	Homo_sapiens
ENSCJAG00000020118	R3HCC1	81	32.864	ENSAPOG00000003616	r3hcc1	91	33.995	Acanthochromis_polyacanthus
ENSCJAG00000020118	R3HCC1	99	71.396	ENSAMEG00000002963	R3HCC1	92	79.864	Ailuropoda_melanoleuca
ENSCJAG00000020118	R3HCC1	96	31.236	ENSACIG00000017144	r3hcc1	98	30.753	Amphilophus_citrinellus
ENSCJAG00000020118	R3HCC1	79	32.067	ENSAPEG00000003613	r3hcc1	97	34.000	Amphiprion_percula
ENSCJAG00000020118	R3HCC1	54	63.265	ENSATEG00000023860	r3hcc1	99	30.930	Anabas_testudineus
ENSCJAG00000020118	R3HCC1	99	44.695	ENSACAG00000016627	R3HCC1	97	47.758	Anolis_carolinensis
ENSCJAG00000020118	R3HCC1	100	95.226	ENSANAG00000036169	R3HCC1	100	95.226	Aotus_nancymaae
ENSCJAG00000020118	R3HCC1	99	70.548	ENSBTAG00000025830	R3HCC1	97	79.007	Bos_taurus
ENSCJAG00000020118	R3HCC1	99	70.413	ENSCAFG00000009210	R3HCC1	99	75.468	Canis_familiaris
ENSCJAG00000020118	R3HCC1	76	74.684	ENSCAFG00020012870	R3HCC1	90	71.899	Canis_lupus_dingo
ENSCJAG00000020118	R3HCC1	99	64.680	ENSCHIG00000009107	R3HCC1	99	72.406	Capra_hircus
ENSCJAG00000020118	R3HCC1	100	77.045	ENSTSYG00000000511	R3HCC1	99	73.227	Carlito_syrichta
ENSCJAG00000020118	R3HCC1	88	53.828	ENSCAPG00000015813	R3HCC1	99	61.717	Cavia_aperea
ENSCJAG00000020118	R3HCC1	98	61.229	ENSCPOG00000009696	R3HCC1	99	68.644	Cavia_porcellus
ENSCJAG00000020118	R3HCC1	100	94.975	ENSCCAG00000037811	R3HCC1	100	94.975	Cebus_capucinus
ENSCJAG00000020118	R3HCC1	100	92.714	ENSCATG00000032971	R3HCC1	100	92.714	Cercocebus_atys
ENSCJAG00000020118	R3HCC1	99	66.290	ENSCLAG00000015556	R3HCC1	84	76.484	Chinchilla_lanigera
ENSCJAG00000020118	R3HCC1	100	84.510	ENSCSAG00000016250	R3HCC1	97	90.364	Chlorocebus_sabaeus
ENSCJAG00000020118	R3HCC1	99	67.963	ENSCHOG00000000396	R3HCC1	96	75.909	Choloepus_hoffmanni
ENSCJAG00000020118	R3HCC1	100	91.960	ENSCANG00000029441	R3HCC1	100	91.960	Colobus_angolensis_palliatus
ENSCJAG00000020118	R3HCC1	100	56.584	ENSCGRG00001014977	R3hcc1	99	63.843	Cricetulus_griseus_chok1gshd
ENSCJAG00000020118	R3HCC1	100	56.584	ENSCGRG00000004454	R3hcc1	99	63.843	Cricetulus_griseus_crigri
ENSCJAG00000020118	R3HCC1	81	32.949	ENSCSEG00000005748	r3hcc1	98	32.527	Cynoglossus_semilaevis
ENSCJAG00000020118	R3HCC1	84	30.894	ENSCVAG00000002640	r3hcc1	98	31.830	Cyprinodon_variegatus
ENSCJAG00000020118	R3HCC1	96	33.170	ENSDARG00000099593	r3hcc1	98	33.256	Danio_rerio
ENSCJAG00000020118	R3HCC1	100	72.045	ENSDNOG00000007168	R3HCC1	93	80.449	Dasypus_novemcinctus
ENSCJAG00000020118	R3HCC1	99	57.992	ENSDORG00000026365	R3hcc1	99	67.155	Dipodomys_ordii
ENSCJAG00000020118	R3HCC1	99	60.000	ENSETEG00000001147	R3HCC1	98	67.640	Echinops_telfairi
ENSCJAG00000020118	R3HCC1	99	72.998	ENSEASG00005018782	R3HCC1	80	81.633	Equus_asinus_asinus
ENSCJAG00000020118	R3HCC1	99	72.540	ENSECAG00000025013	R3HCC1	98	81.406	Equus_caballus
ENSCJAG00000020118	R3HCC1	100	69.021	ENSEEUG00000011918	R3HCC1	97	75.169	Erinaceus_europaeus
ENSCJAG00000020118	R3HCC1	92	33.413	ENSELUG00000023650	r3hcc1	99	33.413	Esox_lucius
ENSCJAG00000020118	R3HCC1	99	74.687	ENSFCAG00000012395	R3HCC1	96	81.364	Felis_catus
ENSCJAG00000020118	R3HCC1	60	70.130	ENSFALG00000001646	R3HCC1	82	37.500	Ficedula_albicollis
ENSCJAG00000020118	R3HCC1	99	62.338	ENSFDAG00000001572	R3HCC1	99	67.880	Fukomys_damarensis
ENSCJAG00000020118	R3HCC1	51	38.462	ENSGMOG00000017590	-	78	37.762	Gadus_morhua
ENSCJAG00000020118	R3HCC1	97	34.699	ENSGAFG00000008747	-	92	33.858	Gambusia_affinis
ENSCJAG00000020118	R3HCC1	96	32.847	ENSGACG00000008447	r3hcc1	96	33.482	Gasterosteus_aculeatus
ENSCJAG00000020118	R3HCC1	100	90.201	ENSGGOG00000013817	R3HCC1	100	90.227	Gorilla_gorilla
ENSCJAG00000020118	R3HCC1	54	49.398	ENSHBUG00000022250	-	63	49.398	Haplochromis_burtoni
ENSCJAG00000020118	R3HCC1	99	64.920	ENSHGLG00000010517	R3HCC1	97	72.304	Heterocephalus_glaber_female
ENSCJAG00000020118	R3HCC1	99	64.920	ENSHGLG00100006388	R3HCC1	97	72.304	Heterocephalus_glaber_male
ENSCJAG00000020118	R3HCC1	60	38.415	ENSHCOG00000011745	r3hcc1	95	32.576	Hippocampus_comes
ENSCJAG00000020118	R3HCC1	97	34.171	ENSIPUG00000024504	r3hcc1	87	34.452	Ictalurus_punctatus
ENSCJAG00000020118	R3HCC1	100	62.697	ENSSTOG00000027130	R3HCC1	99	69.957	Ictidomys_tridecemlineatus
ENSCJAG00000020118	R3HCC1	100	60.215	ENSJJAG00000013075	R3hcc1	100	69.032	Jaculus_jaculus
ENSCJAG00000020118	R3HCC1	91	31.026	ENSKMAG00000000286	r3hcc1	99	31.026	Kryptolebias_marmoratus
ENSCJAG00000020118	R3HCC1	97	38.341	ENSLACG00000011894	R3HCC1	97	39.381	Latimeria_chalumnae
ENSCJAG00000020118	R3HCC1	97	34.834	ENSLOCG00000015442	r3hcc1	99	32.701	Lepisosteus_oculatus
ENSCJAG00000020118	R3HCC1	99	63.900	ENSLAFG00000016137	R3HCC1	96	72.074	Loxodonta_africana
ENSCJAG00000020118	R3HCC1	100	92.462	ENSMFAG00000032894	R3HCC1	100	92.462	Macaca_fascicularis
ENSCJAG00000020118	R3HCC1	100	92.462	ENSMMUG00000016655	R3HCC1	100	92.462	Macaca_mulatta
ENSCJAG00000020118	R3HCC1	100	92.211	ENSMNEG00000043283	R3HCC1	100	92.211	Macaca_nemestrina
ENSCJAG00000020118	R3HCC1	100	92.462	ENSMLEG00000030147	R3HCC1	100	92.462	Mandrillus_leucophaeus
ENSCJAG00000020118	R3HCC1	90	32.746	ENSMAMG00000018146	r3hcc1	98	31.266	Mastacembelus_armatus
ENSCJAG00000020118	R3HCC1	99	44.470	ENSMGAG00000001356	R3HCC1	93	46.035	Meleagris_gallopavo
ENSCJAG00000020118	R3HCC1	54	56.863	ENSMAUG00000016096	R3hcc1	99	65.263	Mesocricetus_auratus
ENSCJAG00000020118	R3HCC1	100	83.166	ENSMICG00000011146	R3HCC1	100	83.417	Microcebus_murinus
ENSCJAG00000020118	R3HCC1	94	78.528	ENSMOCG00000018508	R3hcc1	99	62.986	Microtus_ochrogaster
ENSCJAG00000020118	R3HCC1	97	45.067	ENSMODG00000016809	-	100	50.446	Monodelphis_domestica
ENSCJAG00000020118	R3HCC1	58	48.333	ENSMALG00000000731	r3hcc1	98	31.905	Monopterus_albus
ENSCJAG00000020118	R3HCC1	99	56.592	MGP_CAROLIEiJ_G0019467	R3hcc1	86	76.471	Mus_caroli
ENSCJAG00000020118	R3HCC1	99	56.389	ENSMUSG00000034194	R3hcc1	99	63.895	Mus_musculus
ENSCJAG00000020118	R3HCC1	99	55.311	MGP_PahariEiJ_G0030484	R3hcc1	84	77.711	Mus_pahari
ENSCJAG00000020118	R3HCC1	99	56.048	MGP_SPRETEiJ_G0020359	R3hcc1	99	63.508	Mus_spretus
ENSCJAG00000020118	R3HCC1	93	78.468	ENSMPUG00000003457	R3HCC1	96	77.686	Mustela_putorius_furo
ENSCJAG00000020118	R3HCC1	100	68.100	ENSMLUG00000000266	R3HCC1	97	74.249	Myotis_lucifugus
ENSCJAG00000020118	R3HCC1	100	64.348	ENSNGAG00000016747	R3hcc1	100	72.826	Nannospalax_galili
ENSCJAG00000020118	R3HCC1	74	33.779	ENSNBRG00000016975	-	74	33.779	Neolamprologus_brichardi
ENSCJAG00000020118	R3HCC1	92	84.277	ENSNLEG00000015944	R3HCC1	99	84.277	Nomascus_leucogenys
ENSCJAG00000020118	R3HCC1	98	55.606	ENSMEUG00000010587	R3HCC1	98	59.276	Notamacropus_eugenii
ENSCJAG00000020118	R3HCC1	100	64.108	ENSOPRG00000013390	R3HCC1	96	71.588	Ochotona_princeps
ENSCJAG00000020118	R3HCC1	98	62.366	ENSODEG00000007529	R3HCC1	99	68.870	Octodon_degus
ENSCJAG00000020118	R3HCC1	98	53.986	ENSOANG00000013877	R3HCC1	98	59.732	Ornithorhynchus_anatinus
ENSCJAG00000020118	R3HCC1	99	66.511	ENSOCUG00000023554	R3HCC1	87	72.360	Oryctolagus_cuniculus
ENSCJAG00000020118	R3HCC1	92	33.163	ENSORLG00000016816	r3hcc1	99	33.418	Oryzias_latipes
ENSCJAG00000020118	R3HCC1	92	33.499	ENSORLG00020012005	r3hcc1	99	33.499	Oryzias_latipes_hni
ENSCJAG00000020118	R3HCC1	92	33.163	ENSORLG00015007018	r3hcc1	99	33.418	Oryzias_latipes_hsok
ENSCJAG00000020118	R3HCC1	92	31.633	ENSOMEG00000000816	r3hcc1	99	30.423	Oryzias_melastigma
ENSCJAG00000020118	R3HCC1	100	71.298	ENSOGAG00000001291	R3HCC1	99	75.052	Otolemur_garnettii
ENSCJAG00000020118	R3HCC1	98	69.746	ENSOARG00000010146	R3HCC1	96	78.082	Ovis_aries
ENSCJAG00000020118	R3HCC1	100	88.235	ENSPPAG00000033165	R3HCC1	100	90.909	Pan_paniscus
ENSCJAG00000020118	R3HCC1	100	79.899	ENSPPRG00000002522	R3HCC1	100	80.909	Panthera_pardus
ENSCJAG00000020118	R3HCC1	91	77.961	ENSPTIG00000011230	R3HCC1	95	79.500	Panthera_tigris_altaica
ENSCJAG00000020118	R3HCC1	100	88.725	ENSPTRG00000020076	R3HCC1	100	88.725	Pan_troglodytes
ENSCJAG00000020118	R3HCC1	100	92.462	ENSPANG00000000453	R3HCC1	100	92.462	Papio_anubis
ENSCJAG00000020118	R3HCC1	88	37.604	ENSPKIG00000014426	-	70	47.651	Paramormyrops_kingsleyae
ENSCJAG00000020118	R3HCC1	51	61.111	ENSPKIG00000020397	-	94	34.872	Paramormyrops_kingsleyae
ENSCJAG00000020118	R3HCC1	97	45.516	ENSPSIG00000017664	R3HCC1	98	47.447	Pelodiscus_sinensis
ENSCJAG00000020118	R3HCC1	100	57.819	ENSPEMG00000007118	R3hcc1	99	61.111	Peromyscus_maniculatus_bairdii
ENSCJAG00000020118	R3HCC1	91	48.449	ENSPCIG00000022718	-	85	53.735	Phascolarctos_cinereus
ENSCJAG00000020118	R3HCC1	96	33.575	ENSPFOG00000022301	r3hcc1	90	33.415	Poecilia_formosa
ENSCJAG00000020118	R3HCC1	96	33.575	ENSPLAG00000010794	r3hcc1	90	33.790	Poecilia_latipinna
ENSCJAG00000020118	R3HCC1	96	33.575	ENSPMEG00000022515	r3hcc1	90	33.415	Poecilia_mexicana
ENSCJAG00000020118	R3HCC1	96	33.985	ENSPREG00000000713	r3hcc1	90	34.633	Poecilia_reticulata
ENSCJAG00000020118	R3HCC1	91	81.773	ENSPPYG00000018436	R3HCC1	100	91.626	Pongo_abelii
ENSCJAG00000020118	R3HCC1	71	82.581	ENSPCAG00000012229	R3HCC1	76	82.581	Procavia_capensis
ENSCJAG00000020118	R3HCC1	100	82.663	ENSPCOG00000027554	R3HCC1	100	83.409	Propithecus_coquereli
ENSCJAG00000020118	R3HCC1	100	70.068	ENSPVAG00000009829	R3HCC1	96	78.251	Pteropus_vampyrus
ENSCJAG00000020118	R3HCC1	55	42.254	ENSPNAG00000023875	r3hcc1	75	42.657	Pygocentrus_nattereri
ENSCJAG00000020118	R3HCC1	97	61.441	ENSRNOG00000016777	AABR07018321.1	92	56.732	Rattus_norvegicus
ENSCJAG00000020118	R3HCC1	100	92.965	ENSRBIG00000028045	R3HCC1	100	92.965	Rhinopithecus_bieti
ENSCJAG00000020118	R3HCC1	100	92.965	ENSRROG00000031126	R3HCC1	100	92.965	Rhinopithecus_roxellana
ENSCJAG00000020118	R3HCC1	100	93.216	ENSSBOG00000022590	R3HCC1	100	93.636	Saimiri_boliviensis_boliviensis
ENSCJAG00000020118	R3HCC1	97	51.376	ENSSHAG00000016526	-	98	52.596	Sarcophilus_harrisii
ENSCJAG00000020118	R3HCC1	96	32.051	ENSSFOG00015013507	r3hcc1	98	34.872	Scleropages_formosus
ENSCJAG00000020118	R3HCC1	90	31.296	ENSSMAG00000008647	r3hcc1	98	31.106	Scophthalmus_maximus
ENSCJAG00000020118	R3HCC1	54	51.807	ENSSDUG00000022786	r3hcc1	97	31.180	Seriola_dumerili
ENSCJAG00000020118	R3HCC1	73	70.370	ENSSARG00000013514	-	70	80.986	Sorex_araneus
ENSCJAG00000020118	R3HCC1	94	32.697	ENSSPAG00000013497	r3hcc1	98	32.536	Stegastes_partitus
ENSCJAG00000020118	R3HCC1	99	71.396	ENSSSCG00000039915	-	93	79.638	Sus_scrofa
ENSCJAG00000020118	R3HCC1	100	64.138	ENSSSCG00000037347	-	91	71.910	Sus_scrofa
ENSCJAG00000020118	R3HCC1	95	32.905	ENSTRUG00000015880	r3hcc1	98	32.905	Takifugu_rubripes
ENSCJAG00000020118	R3HCC1	97	63.109	ENSTTRG00000012247	R3HCC1	96	71.526	Tursiops_truncatus
ENSCJAG00000020118	R3HCC1	99	71.034	ENSUAMG00000007344	R3HCC1	98	79.080	Ursus_americanus
ENSCJAG00000020118	R3HCC1	99	69.954	ENSVVUG00000005056	R3HCC1	96	76.471	Vulpes_vulpes
ENSCJAG00000020118	R3HCC1	93	34.509	ENSXCOG00000017626	r3hcc1	88	35.115	Xiphophorus_couchianus
ENSCJAG00000020118	R3HCC1	96	34.793	ENSXMAG00000018375	r3hcc1	91	35.294	Xiphophorus_maculatus