EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000020444 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: DKFZp547I1315|DKFZp686E01200|DKFZp781D1727|FLJ38614
Full Name: -
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 125247 bases
Position: chrNTIC01035500.1:20088750-20213996
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000038001	ResIII	PF04851.15	3.6e-08	1	1
ENSCJAP00000038003	ResIII	PF04851.15	3.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000040145	-	5484	-	ENSCJAP00000038003	1827 (aa)	-	U3ELJ7
ENSCJAT00000040143	-	5394	-	ENSCJAP00000038001	1797 (aa)	-	F7HXY1
ENSCJAT00000067974	-	96	-	ENSCJAP00000065099	32 (aa)	-	A0A2R8NCR4
ENSCJAT00000063721	-	1545	-	ENSCJAP00000050183	514 (aa)	-	F7H451

Gene Model

Click here to download ENSCJAG00000020444's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000020444's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000020444	-	60	32.635	ENSCJAG00000017920	CHD6	85	40.447

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000020444	-	100	99.070	ENSG00000173575	CHD2	100	99.070	Homo_sapiens
ENSCJAG00000020444	-	96	72.508	ENSAPOG00000008913	chd2	100	71.590	Acanthochromis_polyacanthus
ENSCJAG00000020444	-	63	98.785	ENSAMEG00000010805	-	100	98.785	Ailuropoda_melanoleuca
ENSCJAG00000020444	-	96	70.067	ENSAOCG00000016332	chd2	100	69.177	Amphiprion_ocellaris
ENSCJAG00000020444	-	96	72.365	ENSAPEG00000016676	chd2	100	71.444	Amphiprion_percula
ENSCJAG00000020444	-	96	72.116	ENSATEG00000005246	chd2	100	71.337	Anabas_testudineus
ENSCJAG00000020444	-	100	87.935	ENSAPLG00000011141	-	100	87.989	Anas_platyrhynchos
ENSCJAG00000020444	-	98	80.672	ENSACAG00000000088	-	99	80.456	Anolis_carolinensis
ENSCJAG00000020444	-	100	99.453	ENSANAG00000024017	-	100	99.453	Aotus_nancymaae
ENSCJAG00000020444	-	99	98.284	ENSCAFG00000010998	CHD2	100	98.260	Canis_familiaris
ENSCJAG00000020444	-	99	95.003	ENSCHIG00000022261	-	99	95.003	Capra_hircus
ENSCJAG00000020444	-	100	98.577	ENSTSYG00000003272	-	100	98.577	Carlito_syrichta
ENSCJAG00000020444	-	93	96.945	ENSCPOG00000005800	-	100	96.945	Cavia_porcellus
ENSCJAG00000020444	-	100	99.453	ENSCCAG00000035304	-	100	99.453	Cebus_capucinus
ENSCJAG00000020444	-	100	99.179	ENSCATG00000031069	-	100	99.179	Cercocebus_atys
ENSCJAG00000020444	-	100	97.265	ENSCLAG00000016269	-	100	97.265	Chinchilla_lanigera
ENSCJAG00000020444	-	100	99.234	ENSCSAG00000017007	-	100	99.234	Chlorocebus_sabaeus
ENSCJAG00000020444	-	78	100.000	ENSCHOG00000000608	-	82	100.000	Choloepus_hoffmanni
ENSCJAG00000020444	-	82	88.082	ENSCPBG00000018049	-	97	91.346	Chrysemys_picta_bellii
ENSCJAG00000020444	-	74	54.269	ENSCSAVG00000007580	-	93	60.209	Ciona_savignyi
ENSCJAG00000020444	-	100	99.234	ENSCANG00000038126	-	100	99.234	Colobus_angolensis_palliatus
ENSCJAG00000020444	-	100	97.373	ENSCGRG00001006649	Chd2	100	97.373	Cricetulus_griseus_chok1gshd
ENSCJAG00000020444	-	100	97.373	ENSCGRG00000018154	Chd2	100	97.373	Cricetulus_griseus_crigri
ENSCJAG00000020444	-	93	66.318	ENSCSEG00000003646	chd2	93	66.316	Cynoglossus_semilaevis
ENSCJAG00000020444	-	100	64.412	ENSCVAG00000002427	chd2	99	71.000	Cyprinodon_variegatus
ENSCJAG00000020444	-	96	70.073	ENSDARG00000060687	chd2	100	71.470	Danio_rerio
ENSCJAG00000020444	-	99	97.429	ENSDNOG00000009796	-	100	97.429	Dasypus_novemcinctus
ENSCJAG00000020444	-	50	75.000	ENSEBUG00000014994	chd2	83	75.824	Eptatretus_burgeri
ENSCJAG00000020444	-	99	98.064	ENSEASG00005015526	-	99	100.000	Equus_asinus_asinus
ENSCJAG00000020444	-	95	71.833	ENSELUG00000017981	chd2	94	85.185	Esox_lucius
ENSCJAG00000020444	-	100	89.173	ENSFALG00000010369	-	100	89.064	Ficedula_albicollis
ENSCJAG00000020444	-	100	97.155	ENSFDAG00000020651	-	100	97.155	Fukomys_damarensis
ENSCJAG00000020444	-	88	71.244	ENSFHEG00000002119	chd2	91	71.059	Fundulus_heteroclitus
ENSCJAG00000020444	-	94	68.977	ENSGMOG00000002890	chd2	99	70.381	Gadus_morhua
ENSCJAG00000020444	-	100	88.436	ENSGALG00000006949	CHD2	100	88.436	Gallus_gallus
ENSCJAG00000020444	-	96	70.203	ENSGAFG00000001905	chd2	97	69.719	Gambusia_affinis
ENSCJAG00000020444	-	91	70.676	ENSGACG00000013246	chd2	99	69.908	Gasterosteus_aculeatus
ENSCJAG00000020444	-	80	90.393	ENSGAGG00000013176	-	95	97.753	Gopherus_agassizii
ENSCJAG00000020444	-	100	97.648	ENSGGOG00000015677	CHD2	100	97.648	Gorilla_gorilla
ENSCJAG00000020444	-	96	72.431	ENSHBUG00000017947	chd2	100	71.313	Haplochromis_burtoni
ENSCJAG00000020444	-	100	96.991	ENSHGLG00000004435	CHD2	100	96.991	Heterocephalus_glaber_female
ENSCJAG00000020444	-	100	96.335	ENSHGLG00100016376	-	100	96.335	Heterocephalus_glaber_male
ENSCJAG00000020444	-	88	70.859	ENSHCOG00000008855	chd2	95	70.552	Hippocampus_comes
ENSCJAG00000020444	-	72	73.696	ENSIPUG00000000488	chd2	100	68.169	Ictalurus_punctatus
ENSCJAG00000020444	-	100	98.195	ENSSTOG00000001270	-	100	98.195	Ictidomys_tridecemlineatus
ENSCJAG00000020444	-	100	97.427	ENSJJAG00000000213	Chd2	100	97.427	Jaculus_jaculus
ENSCJAG00000020444	-	84	72.251	ENSKMAG00000015849	chd2	99	72.833	Kryptolebias_marmoratus
ENSCJAG00000020444	-	75	97.099	ENSLAFG00000016885	-	100	97.099	Loxodonta_africana
ENSCJAG00000020444	-	100	99.179	ENSMFAG00000033343	-	100	99.179	Macaca_fascicularis
ENSCJAG00000020444	-	100	99.179	ENSMMUG00000011782	-	100	99.179	Macaca_mulatta
ENSCJAG00000020444	-	100	98.798	ENSMNEG00000036875	-	100	98.798	Macaca_nemestrina
ENSCJAG00000020444	-	100	99.234	ENSMLEG00000035026	-	100	99.234	Mandrillus_leucophaeus
ENSCJAG00000020444	-	96	71.899	ENSMAMG00000009082	chd2	100	70.462	Mastacembelus_armatus
ENSCJAG00000020444	-	99	88.310	ENSMGAG00000008966	-	99	88.258	Meleagris_gallopavo
ENSCJAG00000020444	-	100	96.552	ENSMICG00000000332	-	100	96.552	Microcebus_murinus
ENSCJAG00000020444	-	100	96.991	ENSMOCG00000015124	Chd2	100	96.991	Microtus_ochrogaster
ENSCJAG00000020444	-	100	92.324	ENSMODG00000013158	-	100	92.488	Monodelphis_domestica
ENSCJAG00000020444	-	100	96.661	MGP_CAROLIEiJ_G0029860	Chd2	100	96.661	Mus_caroli
ENSCJAG00000020444	-	100	96.388	ENSMUSG00000078671	Chd2	100	96.388	Mus_musculus
ENSCJAG00000020444	-	100	96.554	MGP_PahariEiJ_G0013082	Chd2	100	96.554	Mus_pahari
ENSCJAG00000020444	-	100	96.497	MGP_SPRETEiJ_G0030962	Chd2	100	96.497	Mus_spretus
ENSCJAG00000020444	-	100	98.248	ENSMPUG00000017577	-	100	98.248	Mustela_putorius_furo
ENSCJAG00000020444	-	100	94.897	ENSMLUG00000009292	-	100	94.897	Myotis_lucifugus
ENSCJAG00000020444	-	100	98.030	ENSNGAG00000010792	Chd2	100	98.030	Nannospalax_galili
ENSCJAG00000020444	-	96	71.847	ENSNBRG00000020591	chd2	95	73.086	Neolamprologus_brichardi
ENSCJAG00000020444	-	100	96.608	ENSNLEG00000012349	-	100	96.608	Nomascus_leucogenys
ENSCJAG00000020444	-	71	89.179	ENSMEUG00000001522	-	76	90.514	Notamacropus_eugenii
ENSCJAG00000020444	-	100	96.280	ENSODEG00000016028	-	100	96.280	Octodon_degus
ENSCJAG00000020444	-	96	72.263	ENSONIG00000015136	chd2	100	71.744	Oreochromis_niloticus
ENSCJAG00000020444	-	88	83.147	ENSOANG00000004385	-	99	88.850	Ornithorhynchus_anatinus
ENSCJAG00000020444	-	100	86.354	ENSOCUG00000001628	-	99	97.379	Oryctolagus_cuniculus
ENSCJAG00000020444	-	96	72.007	ENSORLG00000008403	chd2	100	70.392	Oryzias_latipes
ENSCJAG00000020444	-	96	72.088	ENSORLG00020004138	chd2	100	70.576	Oryzias_latipes_hni
ENSCJAG00000020444	-	100	64.355	ENSOMEG00000005831	chd2	100	64.497	Oryzias_melastigma
ENSCJAG00000020444	-	100	96.116	ENSOGAG00000010399	-	100	96.116	Otolemur_garnettii
ENSCJAG00000020444	-	99	96.744	ENSOARG00000010343	-	100	95.350	Ovis_aries
ENSCJAG00000020444	-	100	98.034	ENSPPAG00000030381	-	100	98.034	Pan_paniscus
ENSCJAG00000020444	-	100	99.125	ENSPTRG00000007478	CHD2	100	99.125	Pan_troglodytes
ENSCJAG00000020444	-	100	96.280	ENSPANG00000033355	-	100	96.280	Papio_anubis
ENSCJAG00000020444	-	99	69.797	ENSPKIG00000000495	chd2	100	71.197	Paramormyrops_kingsleyae
ENSCJAG00000020444	-	84	69.955	ENSPMGG00000009941	chd2	99	70.513	Periophthalmus_magnuspinnatus
ENSCJAG00000020444	-	100	97.263	ENSPEMG00000019507	Chd2	100	97.263	Peromyscus_maniculatus_bairdii
ENSCJAG00000020444	-	91	93.114	ENSPCIG00000009417	-	100	92.140	Phascolarctos_cinereus
ENSCJAG00000020444	-	96	72.819	ENSPFOG00000007050	chd2	100	71.905	Poecilia_formosa
ENSCJAG00000020444	-	96	72.987	ENSPLAG00000005067	chd2	100	72.258	Poecilia_latipinna
ENSCJAG00000020444	-	96	72.875	ENSPMEG00000019628	chd2	100	71.959	Poecilia_mexicana
ENSCJAG00000020444	-	100	97.812	ENSPPYG00000006799	-	100	97.812	Pongo_abelii
ENSCJAG00000020444	-	100	98.359	ENSPCOG00000028084	-	100	98.359	Propithecus_coquereli
ENSCJAG00000020444	-	90	73.940	ENSPNYG00000010273	chd2	73	77.836	Pundamilia_nyererei
ENSCJAG00000020444	-	68	74.420	ENSPNAG00000016719	chd2	99	69.252	Pygocentrus_nattereri
ENSCJAG00000020444	-	100	96.442	ENSRNOG00000012716	Chd2	100	96.442	Rattus_norvegicus
ENSCJAG00000020444	-	100	97.212	ENSRBIG00000036875	-	100	97.212	Rhinopithecus_bieti
ENSCJAG00000020444	-	100	99.179	ENSRROG00000041087	-	100	99.179	Rhinopithecus_roxellana
ENSCJAG00000020444	-	100	99.617	ENSSBOG00000023754	-	100	99.617	Saimiri_boliviensis_boliviensis
ENSCJAG00000020444	-	100	92.488	ENSSHAG00000012513	-	100	92.705	Sarcophilus_harrisii
ENSCJAG00000020444	-	100	73.046	ENSSFOG00015023759	chd2	100	72.830	Scleropages_formosus
ENSCJAG00000020444	-	96	71.228	ENSSMAG00000001726	chd2	100	69.920	Scophthalmus_maximus
ENSCJAG00000020444	-	96	70.708	ENSSLDG00000001146	chd2	100	70.110	Seriola_lalandi_dorsalis
ENSCJAG00000020444	-	77	98.333	ENSSARG00000014112	-	82	98.333	Sorex_araneus
ENSCJAG00000020444	-	99	83.802	ENSSPUG00000011266	-	99	84.219	Sphenodon_punctatus
ENSCJAG00000020444	-	96	71.268	ENSSPAG00000016452	chd2	95	72.884	Stegastes_partitus
ENSCJAG00000020444	-	100	98.249	ENSSSCG00000002266	-	100	98.249	Sus_scrofa
ENSCJAG00000020444	-	100	88.980	ENSTGUG00000008540	-	100	88.925	Taeniopygia_guttata
ENSCJAG00000020444	-	83	68.843	ENSTRUG00000008842	chd2	87	67.922	Takifugu_rubripes
ENSCJAG00000020444	-	88	72.409	ENSTNIG00000010760	chd2	98	71.961	Tetraodon_nigroviridis
ENSCJAG00000020444	-	71	96.035	ENSTBEG00000017730	-	83	96.035	Tupaia_belangeri
ENSCJAG00000020444	-	96	99.091	ENSTTRG00000000430	-	95	99.091	Tursiops_truncatus
ENSCJAG00000020444	-	100	95.512	ENSUMAG00000000083	-	100	95.019	Ursus_maritimus
ENSCJAG00000020444	-	86	98.182	ENSVPAG00000009645	-	86	98.195	Vicugna_pacos
ENSCJAG00000020444	-	86	80.117	ENSXETG00000024129	chd2	92	80.117	Xenopus_tropicalis
ENSCJAG00000020444	-	96	69.548	ENSXCOG00000020255	chd2	99	69.277	Xiphophorus_couchianus
ENSCJAG00000020444	-	96	72.875	ENSXMAG00000002707	chd2	100	71.920	Xiphophorus_maculatus