EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000020450 (Gene tree)
Gene ID: 100393939
Gene Symbol: THOC1
Alias: HPR1|P84
Full Name: THO complex 1
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 59763 bases
Position: chrNTIC01003335.1:57437703-57497465
Accession: 100393939
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000066525	efThoc1	PF11957.8	3.5e-146	1	1
ENSCJAP00000038021	efThoc1	PF11957.8	2.1e-141	1	1
ENSCJAP00000054132	efThoc1	PF11957.8	1.9e-140	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000077088	THOC1-204	369	-	ENSCJAP00000065695	122 (aa)	-	A0A2R8MVQ4
ENSCJAT00000068504	THOC1-201	5321	-	ENSCJAP00000054132	687 (aa)	-	A0A2R8MSZ2
ENSCJAT00000085748	THOC1-202	5231	-	ENSCJAP00000066525	657 (aa)	XP_002757154	U3E2X0
ENSCJAT00000040167	THOC1-203	2004	-	ENSCJAP00000038021	667 (aa)	-	F7HVG3

Gene Model

Click here to download ENSCJAG00000020450's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc03013	RNA transport	KEGG
cjc03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000020450's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000020450	THOC1	100	99.239	ENSG00000079134	THOC1	100	99.239	Homo_sapiens
ENSCJAG00000020450	THOC1	100	98.630	ENSAMEG00000006645	THOC1	99	98.630	Ailuropoda_melanoleuca
ENSCJAG00000020450	THOC1	93	73.529	ENSACIG00000019392	thoc1	99	69.029	Amphilophus_citrinellus
ENSCJAG00000020450	THOC1	98	69.538	ENSAOCG00000008391	thoc1	99	69.538	Amphiprion_ocellaris
ENSCJAG00000020450	THOC1	98	73.160	ENSAPEG00000001093	thoc1	99	73.160	Amphiprion_percula
ENSCJAG00000020450	THOC1	98	72.965	ENSATEG00000004783	thoc1	99	72.965	Anabas_testudineus
ENSCJAG00000020450	THOC1	98	88.735	ENSAPLG00000016149	THOC1	98	88.735	Anas_platyrhynchos
ENSCJAG00000020450	THOC1	100	88.485	ENSACAG00000008307	THOC1	98	87.102	Anolis_carolinensis
ENSCJAG00000020450	THOC1	100	98.645	ENSANAG00000033200	THOC1	100	98.645	Aotus_nancymaae
ENSCJAG00000020450	THOC1	98	72.699	ENSACLG00000016836	thoc1	99	72.699	Astatotilapia_calliptera
ENSCJAG00000020450	THOC1	93	71.635	ENSAMXG00000014708	thoc1	97	71.635	Astyanax_mexicanus
ENSCJAG00000020450	THOC1	100	97.869	ENSBTAG00000019215	THOC1	100	97.869	Bos_taurus
ENSCJAG00000020450	THOC1	71	35.073	WBGene00020172	thoc-1	69	35.745	Caenorhabditis_elegans
ENSCJAG00000020450	THOC1	100	98.478	ENSCAFG00000018324	THOC1	100	98.478	Canis_familiaris
ENSCJAG00000020450	THOC1	100	98.478	ENSCAFG00020017894	THOC1	100	98.478	Canis_lupus_dingo
ENSCJAG00000020450	THOC1	100	97.869	ENSCHIG00000015399	THOC1	100	97.869	Capra_hircus
ENSCJAG00000020450	THOC1	100	98.478	ENSTSYG00000010585	THOC1	99	98.478	Carlito_syrichta
ENSCJAG00000020450	THOC1	85	86.134	ENSCAPG00000016270	THOC1	99	86.134	Cavia_aperea
ENSCJAG00000020450	THOC1	100	95.586	ENSCPOG00000000959	THOC1	100	95.586	Cavia_porcellus
ENSCJAG00000020450	THOC1	100	99.848	ENSCCAG00000025766	THOC1	100	99.848	Cebus_capucinus
ENSCJAG00000020450	THOC1	100	96.195	ENSCATG00000028180	THOC1	99	97.472	Cercocebus_atys
ENSCJAG00000020450	THOC1	97	96.714	ENSCLAG00000009117	THOC1	100	96.714	Chinchilla_lanigera
ENSCJAG00000020450	THOC1	100	99.696	ENSCSAG00000017631	THOC1	100	99.696	Chlorocebus_sabaeus
ENSCJAG00000020450	THOC1	89	86.691	ENSCHOG00000010609	THOC1	89	86.691	Choloepus_hoffmanni
ENSCJAG00000020450	THOC1	99	92.519	ENSCPBG00000027558	THOC1	99	92.519	Chrysemys_picta_bellii
ENSCJAG00000020450	THOC1	74	48.606	ENSCING00000007663	-	100	48.503	Ciona_intestinalis
ENSCJAG00000020450	THOC1	93	47.611	ENSCSAVG00000010649	-	99	46.815	Ciona_savignyi
ENSCJAG00000020450	THOC1	100	99.543	ENSCANG00000034265	THOC1	100	99.543	Colobus_angolensis_palliatus
ENSCJAG00000020450	THOC1	100	95.586	ENSCGRG00001016464	Thoc1	99	95.586	Cricetulus_griseus_chok1gshd
ENSCJAG00000020450	THOC1	90	79.054	ENSCGRG00000003390	-	99	79.054	Cricetulus_griseus_crigri
ENSCJAG00000020450	THOC1	98	95.349	ENSCGRG00000010269	-	100	95.775	Cricetulus_griseus_crigri
ENSCJAG00000020450	THOC1	98	71.689	ENSCSEG00000012486	thoc1	99	73.312	Cynoglossus_semilaevis
ENSCJAG00000020450	THOC1	98	71.933	ENSCVAG00000020600	thoc1	99	71.933	Cyprinodon_variegatus
ENSCJAG00000020450	THOC1	99	74.962	ENSDARG00000088246	thoc1	99	74.962	Danio_rerio
ENSCJAG00000020450	THOC1	100	97.717	ENSDNOG00000019217	THOC1	100	97.717	Dasypus_novemcinctus
ENSCJAG00000020450	THOC1	99	90.288	ENSDORG00000008060	Thoc1	99	92.019	Dipodomys_ordii
ENSCJAG00000020450	THOC1	98	36.842	FBgn0037382	Hpr1	74	41.953	Drosophila_melanogaster
ENSCJAG00000020450	THOC1	82	95.200	ENSETEG00000004165	THOC1	92	95.200	Echinops_telfairi
ENSCJAG00000020450	THOC1	92	64.286	ENSEBUG00000005998	thoc1	98	65.615	Eptatretus_burgeri
ENSCJAG00000020450	THOC1	100	98.174	ENSEASG00005002549	THOC1	96	98.174	Equus_asinus_asinus
ENSCJAG00000020450	THOC1	100	98.630	ENSECAG00000009267	THOC1	90	98.630	Equus_caballus
ENSCJAG00000020450	THOC1	71	100.000	ENSEEUG00000012214	-	74	100.000	Erinaceus_europaeus
ENSCJAG00000020450	THOC1	99	72.961	ENSELUG00000023277	thoc1	100	72.961	Esox_lucius
ENSCJAG00000020450	THOC1	100	98.326	ENSFCAG00000022454	THOC1	87	98.326	Felis_catus
ENSCJAG00000020450	THOC1	97	91.291	ENSFALG00000006205	THOC1	99	91.291	Ficedula_albicollis
ENSCJAG00000020450	THOC1	98	96.909	ENSFDAG00000006842	THOC1	100	96.909	Fukomys_damarensis
ENSCJAG00000020450	THOC1	98	71.626	ENSFHEG00000008841	thoc1	99	71.626	Fundulus_heteroclitus
ENSCJAG00000020450	THOC1	99	72.214	ENSGMOG00000011486	thoc1	99	72.214	Gadus_morhua
ENSCJAG00000020450	THOC1	99	90.229	ENSGALG00000014915	THOC1	98	90.229	Gallus_gallus
ENSCJAG00000020450	THOC1	98	72.086	ENSGAFG00000021464	thoc1	99	72.086	Gambusia_affinis
ENSCJAG00000020450	THOC1	99	72.409	ENSGACG00000017361	thoc1	99	73.035	Gasterosteus_aculeatus
ENSCJAG00000020450	THOC1	99	92.214	ENSGAGG00000021230	-	98	92.214	Gopherus_agassizii
ENSCJAG00000020450	THOC1	100	99.391	ENSGGOG00000003013	THOC1	99	99.391	Gorilla_gorilla
ENSCJAG00000020450	THOC1	98	72.699	ENSHBUG00000009096	thoc1	99	72.699	Haplochromis_burtoni
ENSCJAG00000020450	THOC1	100	95.586	ENSHGLG00000003712	-	100	95.586	Heterocephalus_glaber_female
ENSCJAG00000020450	THOC1	78	90.674	ENSHGLG00000009264	-	99	98.667	Heterocephalus_glaber_female
ENSCJAG00000020450	THOC1	100	95.890	ENSHGLG00100003570	THOC1	100	95.890	Heterocephalus_glaber_male
ENSCJAG00000020450	THOC1	77	89.119	ENSHGLG00100002225	-	99	96.000	Heterocephalus_glaber_male
ENSCJAG00000020450	THOC1	89	74.383	ENSIPUG00000005306	thoc1	99	74.194	Ictalurus_punctatus
ENSCJAG00000020450	THOC1	100	98.174	ENSSTOG00000006484	THOC1	100	98.174	Ictidomys_tridecemlineatus
ENSCJAG00000020450	THOC1	52	94.118	ENSJJAG00000014893	-	96	94.118	Jaculus_jaculus
ENSCJAG00000020450	THOC1	99	71.842	ENSKMAG00000003904	thoc1	99	71.842	Kryptolebias_marmoratus
ENSCJAG00000020450	THOC1	99	72.977	ENSLBEG00000020372	thoc1	98	72.977	Labrus_bergylta
ENSCJAG00000020450	THOC1	99	79.573	ENSLACG00000014869	THOC1	99	78.626	Latimeria_chalumnae
ENSCJAG00000020450	THOC1	98	77.182	ENSLOCG00000002097	thoc1	99	76.534	Lepisosteus_oculatus
ENSCJAG00000020450	THOC1	100	97.869	ENSLAFG00000009585	THOC1	100	97.869	Loxodonta_africana
ENSCJAG00000020450	THOC1	100	99.696	ENSMFAG00000041520	THOC1	99	99.696	Macaca_fascicularis
ENSCJAG00000020450	THOC1	100	99.696	ENSMMUG00000004662	THOC1	100	99.696	Macaca_mulatta
ENSCJAG00000020450	THOC1	100	99.696	ENSMNEG00000040177	THOC1	99	99.696	Macaca_nemestrina
ENSCJAG00000020450	THOC1	100	99.696	ENSMLEG00000034201	THOC1	99	99.696	Mandrillus_leucophaeus
ENSCJAG00000020450	THOC1	94	73.473	ENSMAMG00000016747	thoc1	99	73.473	Mastacembelus_armatus
ENSCJAG00000020450	THOC1	98	72.699	ENSMZEG00005024609	thoc1	99	72.699	Maylandia_zebra
ENSCJAG00000020450	THOC1	97	90.031	ENSMGAG00000009811	THOC1	100	90.031	Meleagris_gallopavo
ENSCJAG00000020450	THOC1	100	95.586	ENSMAUG00000010272	Thoc1	99	95.586	Mesocricetus_auratus
ENSCJAG00000020450	THOC1	100	98.326	ENSMICG00000027200	THOC1	100	98.326	Microcebus_murinus
ENSCJAG00000020450	THOC1	99	94.512	ENSMOCG00000014536	-	86	94.512	Microtus_ochrogaster
ENSCJAG00000020450	THOC1	99	83.053	ENSMOCG00000014924	-	96	83.053	Microtus_ochrogaster
ENSCJAG00000020450	THOC1	92	72.876	ENSMMOG00000011772	thoc1	100	72.876	Mola_mola
ENSCJAG00000020450	THOC1	100	93.534	ENSMODG00000021482	THOC1	100	93.534	Monodelphis_domestica
ENSCJAG00000020450	THOC1	98	73.118	ENSMALG00000021872	thoc1	99	73.118	Monopterus_albus
ENSCJAG00000020450	THOC1	100	96.043	MGP_CAROLIEiJ_G0021989	Thoc1	100	96.043	Mus_caroli
ENSCJAG00000020450	THOC1	100	96.195	ENSMUSG00000024287	Thoc1	100	97.163	Mus_musculus
ENSCJAG00000020450	THOC1	100	96.195	MGP_PahariEiJ_G0018726	Thoc1	100	96.195	Mus_pahari
ENSCJAG00000020450	THOC1	100	96.195	MGP_SPRETEiJ_G0022905	Thoc1	100	96.195	Mus_spretus
ENSCJAG00000020450	THOC1	100	98.478	ENSMPUG00000005448	THOC1	100	98.478	Mustela_putorius_furo
ENSCJAG00000020450	THOC1	100	97.416	ENSMLUG00000004090	-	100	97.416	Myotis_lucifugus
ENSCJAG00000020450	THOC1	90	84.317	ENSMLUG00000027965	-	99	84.148	Myotis_lucifugus
ENSCJAG00000020450	THOC1	60	83.879	ENSMLUG00000024912	-	100	83.879	Myotis_lucifugus
ENSCJAG00000020450	THOC1	99	75.688	ENSNGAG00000008061	-	99	76.352	Nannospalax_galili
ENSCJAG00000020450	THOC1	100	97.412	ENSNGAG00000001401	-	100	97.412	Nannospalax_galili
ENSCJAG00000020450	THOC1	96	73.186	ENSNBRG00000005991	thoc1	97	73.186	Neolamprologus_brichardi
ENSCJAG00000020450	THOC1	100	99.696	ENSNLEG00000006835	THOC1	100	99.696	Nomascus_leucogenys
ENSCJAG00000020450	THOC1	97	81.690	ENSMEUG00000009756	THOC1	99	81.690	Notamacropus_eugenii
ENSCJAG00000020450	THOC1	100	78.539	ENSOPRG00000001108	THOC1	100	78.539	Ochotona_princeps
ENSCJAG00000020450	THOC1	100	90.411	ENSODEG00000006623	THOC1	100	90.411	Octodon_degus
ENSCJAG00000020450	THOC1	99	72.382	ENSONIG00000009440	thoc1	99	72.382	Oreochromis_niloticus
ENSCJAG00000020450	THOC1	100	98.174	ENSOCUG00000011601	THOC1	100	98.174	Oryctolagus_cuniculus
ENSCJAG00000020450	THOC1	98	72.393	ENSORLG00000017629	thoc1	99	72.393	Oryzias_latipes
ENSCJAG00000020450	THOC1	98	72.393	ENSORLG00020007567	thoc1	99	72.393	Oryzias_latipes_hni
ENSCJAG00000020450	THOC1	98	72.546	ENSORLG00015007356	thoc1	99	72.546	Oryzias_latipes_hsok
ENSCJAG00000020450	THOC1	98	71.012	ENSOMEG00000008200	thoc1	89	82.051	Oryzias_melastigma
ENSCJAG00000020450	THOC1	100	94.977	ENSOGAG00000000470	THOC1	99	94.977	Otolemur_garnettii
ENSCJAG00000020450	THOC1	99	96.201	ENSOARG00000009238	THOC1	99	96.201	Ovis_aries
ENSCJAG00000020450	THOC1	100	99.391	ENSPPAG00000031812	THOC1	99	99.391	Pan_paniscus
ENSCJAG00000020450	THOC1	100	98.021	ENSPPRG00000023794	THOC1	100	98.021	Panthera_pardus
ENSCJAG00000020450	THOC1	100	98.021	ENSPTIG00000007469	THOC1	100	98.021	Panthera_tigris_altaica
ENSCJAG00000020450	THOC1	100	98.494	ENSPTRG00000009816	THOC1	100	98.494	Pan_troglodytes
ENSCJAG00000020450	THOC1	100	98.638	ENSPANG00000008665	THOC1	100	98.638	Papio_anubis
ENSCJAG00000020450	THOC1	99	72.630	ENSPKIG00000005906	thoc1	99	73.394	Paramormyrops_kingsleyae
ENSCJAG00000020450	THOC1	81	93.996	ENSPSIG00000007691	THOC1	98	93.996	Pelodiscus_sinensis
ENSCJAG00000020450	THOC1	93	73.258	ENSPMGG00000008279	thoc1	95	73.258	Periophthalmus_magnuspinnatus
ENSCJAG00000020450	THOC1	100	96.043	ENSPEMG00000021789	Thoc1	100	96.043	Peromyscus_maniculatus_bairdii
ENSCJAG00000020450	THOC1	74	93.725	ENSPCIG00000026942	THOC1	98	93.725	Phascolarctos_cinereus
ENSCJAG00000020450	THOC1	98	72.350	ENSPFOG00000011673	thoc1	99	72.350	Poecilia_formosa
ENSCJAG00000020450	THOC1	98	72.239	ENSPLAG00000019648	thoc1	99	72.239	Poecilia_latipinna
ENSCJAG00000020450	THOC1	98	72.350	ENSPMEG00000007083	thoc1	99	72.350	Poecilia_mexicana
ENSCJAG00000020450	THOC1	98	72.086	ENSPREG00000006719	thoc1	99	72.086	Poecilia_reticulata
ENSCJAG00000020450	THOC1	74	99.589	ENSPPYG00000009049	-	99	99.589	Pongo_abelii
ENSCJAG00000020450	THOC1	100	87.823	ENSPCAG00000005320	THOC1	100	87.823	Procavia_capensis
ENSCJAG00000020450	THOC1	100	98.021	ENSPCOG00000009234	THOC1	100	98.021	Propithecus_coquereli
ENSCJAG00000020450	THOC1	100	96.347	ENSPVAG00000004007	THOC1	100	96.347	Pteropus_vampyrus
ENSCJAG00000020450	THOC1	98	72.699	ENSPNYG00000019152	thoc1	99	72.699	Pundamilia_nyererei
ENSCJAG00000020450	THOC1	98	74.769	ENSPNAG00000023390	thoc1	99	74.769	Pygocentrus_nattereri
ENSCJAG00000020450	THOC1	91	85.938	ENSRNOG00000015332	Thoc1	100	85.938	Rattus_norvegicus
ENSCJAG00000020450	THOC1	100	98.645	ENSRBIG00000033738	THOC1	99	99.652	Rhinopithecus_bieti
ENSCJAG00000020450	THOC1	100	99.696	ENSRROG00000044988	THOC1	100	99.696	Rhinopithecus_roxellana
ENSCJAG00000020450	THOC1	100	99.391	ENSSBOG00000016556	THOC1	99	99.391	Saimiri_boliviensis_boliviensis
ENSCJAG00000020450	THOC1	100	94.377	ENSSHAG00000014829	THOC1	100	94.377	Sarcophilus_harrisii
ENSCJAG00000020450	THOC1	98	75.000	ENSSFOG00015021527	thoc1	99	75.000	Scleropages_formosus
ENSCJAG00000020450	THOC1	98	70.661	ENSSMAG00000018465	thoc1	99	70.661	Scophthalmus_maximus
ENSCJAG00000020450	THOC1	98	73.425	ENSSDUG00000016810	thoc1	99	73.425	Seriola_dumerili
ENSCJAG00000020450	THOC1	98	73.118	ENSSLDG00000015555	thoc1	99	73.118	Seriola_lalandi_dorsalis
ENSCJAG00000020450	THOC1	89	96.169	ENSSARG00000006910	THOC1	88	96.169	Sorex_araneus
ENSCJAG00000020450	THOC1	98	89.596	ENSSPUG00000007238	THOC1	99	89.618	Sphenodon_punctatus
ENSCJAG00000020450	THOC1	98	70.031	ENSSPAG00000018847	thoc1	99	70.031	Stegastes_partitus
ENSCJAG00000020450	THOC1	100	98.326	ENSSSCG00000025653	THOC1	94	98.326	Sus_scrofa
ENSCJAG00000020450	THOC1	99	91.145	ENSTGUG00000010204	THOC1	99	91.145	Taeniopygia_guttata
ENSCJAG00000020450	THOC1	98	72.239	ENSTRUG00000013518	thoc1	99	72.239	Takifugu_rubripes
ENSCJAG00000020450	THOC1	98	72.393	ENSTNIG00000008473	thoc1	99	72.393	Tetraodon_nigroviridis
ENSCJAG00000020450	THOC1	100	90.107	ENSTBEG00000016920	THOC1	100	90.107	Tupaia_belangeri
ENSCJAG00000020450	THOC1	100	91.020	ENSTTRG00000016664	THOC1	100	91.020	Tursiops_truncatus
ENSCJAG00000020450	THOC1	100	98.478	ENSUAMG00000002527	THOC1	100	98.478	Ursus_americanus
ENSCJAG00000020450	THOC1	100	98.478	ENSUMAG00000019693	THOC1	100	98.478	Ursus_maritimus
ENSCJAG00000020450	THOC1	77	97.500	ENSVPAG00000003726	-	77	97.500	Vicugna_pacos
ENSCJAG00000020450	THOC1	100	98.478	ENSVVUG00000004384	THOC1	100	98.478	Vulpes_vulpes
ENSCJAG00000020450	THOC1	99	79.091	ENSXETG00000003155	thoc1	98	79.091	Xenopus_tropicalis
ENSCJAG00000020450	THOC1	93	70.376	ENSXCOG00000016085	thoc1	89	70.376	Xiphophorus_couchianus
ENSCJAG00000020450	THOC1	98	72.086	ENSXMAG00000002353	thoc1	99	72.086	Xiphophorus_maculatus