EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000020537 (Gene tree)
Gene ID: 100397822
Gene Symbol: EXOSC2
Alias: RRP4|Rrp4p|hRrp4p|p7
Full Name: exosome component 2
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 10027 bases
Position: chrNTIC01000001.1:37747639-37757665
Accession: 100397822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000038152	ECR1_N	PF14382.6	4.3e-15	1	1
ENSCJAP00000038154	ECR1_N	PF14382.6	4.4e-15	1	1
ENSCJAP00000064079	ECR1_N	PF14382.6	5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000074236	EXOSC2-201	1046	-	ENSCJAP00000064079	293 (aa)	XP_002743446	A0A2R8NBD3
ENSCJAT00000040309	EXOSC2-203	792	-	ENSCJAP00000038152	263 (aa)	-	F7I4T4
ENSCJAT00000040311	EXOSC2-202	804	-	ENSCJAP00000038154	267 (aa)	-	F7I4T1

Gene Model

Click here to download ENSCJAG00000020537's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000020537's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000020537	EXOSC2	100	99.317	ENSG00000130713	EXOSC2	100	99.317	Homo_sapiens
ENSCJAG00000020537	EXOSC2	95	75.269	ENSAPOG00000008861	exosc2	97	78.491	Acanthochromis_polyacanthus
ENSCJAG00000020537	EXOSC2	100	97.270	ENSAMEG00000016239	EXOSC2	100	97.270	Ailuropoda_melanoleuca
ENSCJAG00000020537	EXOSC2	100	77.474	ENSACIG00000019054	exosc2	100	77.474	Amphilophus_citrinellus
ENSCJAG00000020537	EXOSC2	100	77.474	ENSAOCG00000008577	exosc2	100	77.474	Amphiprion_ocellaris
ENSCJAG00000020537	EXOSC2	100	77.474	ENSAOCG00000004983	exosc2	100	77.474	Amphiprion_ocellaris
ENSCJAG00000020537	EXOSC2	100	77.474	ENSAPEG00000014088	exosc2	100	77.474	Amphiprion_percula
ENSCJAG00000020537	EXOSC2	100	78.498	ENSATEG00000018680	exosc2	100	78.498	Anabas_testudineus
ENSCJAG00000020537	EXOSC2	96	87.943	ENSAPLG00000012516	EXOSC2	97	87.943	Anas_platyrhynchos
ENSCJAG00000020537	EXOSC2	99	85.274	ENSACAG00000002706	EXOSC2	99	85.274	Anolis_carolinensis
ENSCJAG00000020537	EXOSC2	100	76.792	ENSACLG00000013613	exosc2	100	76.792	Astatotilapia_calliptera
ENSCJAG00000020537	EXOSC2	100	80.339	ENSAMXG00000042605	exosc2	100	80.339	Astyanax_mexicanus
ENSCJAG00000020537	EXOSC2	100	96.246	ENSBTAG00000048071	EXOSC2	100	96.246	Bos_taurus
ENSCJAG00000020537	EXOSC2	91	43.284	WBGene00022232	exos-2	88	43.284	Caenorhabditis_elegans
ENSCJAG00000020537	EXOSC2	99	96.575	ENSCAFG00000019941	EXOSC2	99	96.575	Canis_familiaris
ENSCJAG00000020537	EXOSC2	100	96.587	ENSCAFG00020024047	EXOSC2	100	96.587	Canis_lupus_dingo
ENSCJAG00000020537	EXOSC2	100	96.246	ENSCHIG00000021398	EXOSC2	100	96.246	Capra_hircus
ENSCJAG00000020537	EXOSC2	100	95.904	ENSTSYG00000001805	EXOSC2	100	95.904	Carlito_syrichta
ENSCJAG00000020537	EXOSC2	100	91.809	ENSCPOG00000005902	EXOSC2	100	91.809	Cavia_porcellus
ENSCJAG00000020537	EXOSC2	100	99.659	ENSCCAG00000019749	EXOSC2	100	99.659	Cebus_capucinus
ENSCJAG00000020537	EXOSC2	100	98.635	ENSCATG00000025389	-	100	98.635	Cercocebus_atys
ENSCJAG00000020537	EXOSC2	100	96.928	ENSCLAG00000006195	EXOSC2	100	97.166	Chinchilla_lanigera
ENSCJAG00000020537	EXOSC2	100	98.635	ENSCSAG00000014760	EXOSC2	100	98.635	Chlorocebus_sabaeus
ENSCJAG00000020537	EXOSC2	100	96.587	ENSCHOG00000000858	EXOSC2	100	96.587	Choloepus_hoffmanni
ENSCJAG00000020537	EXOSC2	99	86.986	ENSCPBG00000022626	EXOSC2	99	86.986	Chrysemys_picta_bellii
ENSCJAG00000020537	EXOSC2	96	61.324	ENSCING00000014934	-	94	61.324	Ciona_intestinalis
ENSCJAG00000020537	EXOSC2	92	61.957	ENSCSAVG00000003684	-	100	61.957	Ciona_savignyi
ENSCJAG00000020537	EXOSC2	100	98.635	ENSCANG00000039828	-	100	98.635	Colobus_angolensis_palliatus
ENSCJAG00000020537	EXOSC2	99	91.438	ENSCANG00000029298	-	99	91.438	Colobus_angolensis_palliatus
ENSCJAG00000020537	EXOSC2	100	95.222	ENSCGRG00001013981	Exosc2	100	95.222	Cricetulus_griseus_chok1gshd
ENSCJAG00000020537	EXOSC2	100	95.222	ENSCGRG00000017629	Exosc2	100	95.222	Cricetulus_griseus_crigri
ENSCJAG00000020537	EXOSC2	100	76.792	ENSCSEG00000016539	exosc2	100	76.792	Cynoglossus_semilaevis
ENSCJAG00000020537	EXOSC2	100	76.451	ENSCVAG00000022260	exosc2	100	76.451	Cyprinodon_variegatus
ENSCJAG00000020537	EXOSC2	100	77.966	ENSDARG00000028688	exosc2	100	77.966	Danio_rerio
ENSCJAG00000020537	EXOSC2	91	97.753	ENSDNOG00000025767	-	100	97.753	Dasypus_novemcinctus
ENSCJAG00000020537	EXOSC2	100	93.857	ENSDORG00000009238	Exosc2	100	93.857	Dipodomys_ordii
ENSCJAG00000020537	EXOSC2	89	61.832	FBgn0034879	Rrp4	89	61.509	Drosophila_melanogaster
ENSCJAG00000020537	EXOSC2	94	78.986	ENSETEG00000016130	-	99	78.986	Echinops_telfairi
ENSCJAG00000020537	EXOSC2	100	97.270	ENSEASG00005008475	EXOSC2	86	97.270	Equus_asinus_asinus
ENSCJAG00000020537	EXOSC2	100	97.270	ENSECAG00000007897	EXOSC2	86	97.270	Equus_caballus
ENSCJAG00000020537	EXOSC2	100	78.644	ENSELUG00000013641	exosc2	100	78.644	Esox_lucius
ENSCJAG00000020537	EXOSC2	100	97.270	ENSFCAG00000025936	EXOSC2	100	97.270	Felis_catus
ENSCJAG00000020537	EXOSC2	98	83.624	ENSFALG00000001446	EXOSC2	98	83.624	Ficedula_albicollis
ENSCJAG00000020537	EXOSC2	100	95.904	ENSFDAG00000017196	EXOSC2	100	95.951	Fukomys_damarensis
ENSCJAG00000020537	EXOSC2	100	77.133	ENSFHEG00000018571	exosc2	100	77.133	Fundulus_heteroclitus
ENSCJAG00000020537	EXOSC2	100	73.379	ENSGMOG00000011785	exosc2	99	73.379	Gadus_morhua
ENSCJAG00000020537	EXOSC2	99	85.959	ENSGALG00000040373	EXOSC2	99	85.959	Gallus_gallus
ENSCJAG00000020537	EXOSC2	99	76.027	ENSGAFG00000010283	exosc2	99	76.027	Gambusia_affinis
ENSCJAG00000020537	EXOSC2	100	75.427	ENSGACG00000016805	exosc2	99	75.904	Gasterosteus_aculeatus
ENSCJAG00000020537	EXOSC2	87	90.196	ENSGAGG00000021026	EXOSC2	96	90.196	Gopherus_agassizii
ENSCJAG00000020537	EXOSC2	100	98.635	ENSGGOG00000010578	EXOSC2	100	98.635	Gorilla_gorilla
ENSCJAG00000020537	EXOSC2	100	77.474	ENSHBUG00000022437	exosc2	100	77.474	Haplochromis_burtoni
ENSCJAG00000020537	EXOSC2	100	96.928	ENSHGLG00000012834	EXOSC2	100	97.166	Heterocephalus_glaber_female
ENSCJAG00000020537	EXOSC2	100	96.928	ENSHGLG00100007092	EXOSC2	100	97.166	Heterocephalus_glaber_male
ENSCJAG00000020537	EXOSC2	100	75.427	ENSHCOG00000019130	exosc2	100	75.427	Hippocampus_comes
ENSCJAG00000020537	EXOSC2	100	77.891	ENSIPUG00000015397	exosc2	100	77.891	Ictalurus_punctatus
ENSCJAG00000020537	EXOSC2	100	96.587	ENSSTOG00000005999	EXOSC2	100	96.587	Ictidomys_tridecemlineatus
ENSCJAG00000020537	EXOSC2	100	95.563	ENSJJAG00000003188	Exosc2	100	95.563	Jaculus_jaculus
ENSCJAG00000020537	EXOSC2	99	77.397	ENSKMAG00000017397	exosc2	99	77.397	Kryptolebias_marmoratus
ENSCJAG00000020537	EXOSC2	100	76.792	ENSLBEG00000019269	exosc2	100	76.792	Labrus_bergylta
ENSCJAG00000020537	EXOSC2	100	83.333	ENSLACG00000015530	EXOSC2	100	83.333	Latimeria_chalumnae
ENSCJAG00000020537	EXOSC2	100	97.279	ENSLAFG00000006984	EXOSC2	100	97.279	Loxodonta_africana
ENSCJAG00000020537	EXOSC2	100	85.324	ENSMFAG00000034160	-	84	85.324	Macaca_fascicularis
ENSCJAG00000020537	EXOSC2	100	98.635	ENSMFAG00000000597	-	100	98.635	Macaca_fascicularis
ENSCJAG00000020537	EXOSC2	100	98.127	ENSMMUG00000012498	EXOSC2	100	98.127	Macaca_mulatta
ENSCJAG00000020537	EXOSC2	100	86.348	ENSMNEG00000028704	-	91	86.348	Macaca_nemestrina
ENSCJAG00000020537	EXOSC2	100	98.635	ENSMNEG00000031861	-	100	98.635	Macaca_nemestrina
ENSCJAG00000020537	EXOSC2	100	85.324	ENSMLEG00000029891	-	91	85.324	Mandrillus_leucophaeus
ENSCJAG00000020537	EXOSC2	100	98.635	ENSMLEG00000042587	-	100	98.635	Mandrillus_leucophaeus
ENSCJAG00000020537	EXOSC2	100	77.816	ENSMAMG00000012466	exosc2	100	77.816	Mastacembelus_armatus
ENSCJAG00000020537	EXOSC2	100	76.451	ENSMZEG00005018737	exosc2	100	76.451	Maylandia_zebra
ENSCJAG00000020537	EXOSC2	99	85.959	ENSMGAG00000005450	EXOSC2	99	85.959	Meleagris_gallopavo
ENSCJAG00000020537	EXOSC2	100	95.222	ENSMAUG00000008299	Exosc2	100	95.222	Mesocricetus_auratus
ENSCJAG00000020537	EXOSC2	100	97.952	ENSMICG00000015495	EXOSC2	100	97.952	Microcebus_murinus
ENSCJAG00000020537	EXOSC2	100	94.881	ENSMOCG00000008262	Exosc2	100	94.881	Microtus_ochrogaster
ENSCJAG00000020537	EXOSC2	100	78.157	ENSMMOG00000009616	exosc2	100	78.157	Mola_mola
ENSCJAG00000020537	EXOSC2	100	92.833	ENSMODG00000012114	EXOSC2	100	92.833	Monodelphis_domestica
ENSCJAG00000020537	EXOSC2	100	77.474	ENSMALG00000022132	exosc2	100	77.474	Monopterus_albus
ENSCJAG00000020537	EXOSC2	100	93.857	MGP_CAROLIEiJ_G0023415	Exosc2	100	94.595	Mus_caroli
ENSCJAG00000020537	EXOSC2	100	93.857	ENSMUSG00000039356	Exosc2	100	94.595	Mus_musculus
ENSCJAG00000020537	EXOSC2	100	94.198	MGP_PahariEiJ_G0024872	Exosc2	100	94.595	Mus_pahari
ENSCJAG00000020537	EXOSC2	100	93.857	MGP_SPRETEiJ_G0024332	Exosc2	100	94.595	Mus_spretus
ENSCJAG00000020537	EXOSC2	100	96.928	ENSMPUG00000012686	EXOSC2	100	96.928	Mustela_putorius_furo
ENSCJAG00000020537	EXOSC2	100	97.288	ENSMLUG00000008776	EXOSC2	100	97.288	Myotis_lucifugus
ENSCJAG00000020537	EXOSC2	100	95.563	ENSNGAG00000019383	Exosc2	100	95.563	Nannospalax_galili
ENSCJAG00000020537	EXOSC2	100	77.133	ENSNBRG00000005453	exosc2	100	77.133	Neolamprologus_brichardi
ENSCJAG00000020537	EXOSC2	100	99.317	ENSNLEG00000012533	EXOSC2	100	99.317	Nomascus_leucogenys
ENSCJAG00000020537	EXOSC2	100	72.014	ENSMEUG00000000795	EXOSC2	100	72.014	Notamacropus_eugenii
ENSCJAG00000020537	EXOSC2	65	96.970	ENSOPRG00000008688	EXOSC2	65	96.970	Ochotona_princeps
ENSCJAG00000020537	EXOSC2	87	93.701	ENSODEG00000019513	-	100	93.701	Octodon_degus
ENSCJAG00000020537	EXOSC2	100	93.174	ENSODEG00000016880	-	100	93.174	Octodon_degus
ENSCJAG00000020537	EXOSC2	100	77.133	ENSONIG00000014086	exosc2	100	77.133	Oreochromis_niloticus
ENSCJAG00000020537	EXOSC2	100	84.642	ENSOANG00000001044	EXOSC2	100	84.642	Ornithorhynchus_anatinus
ENSCJAG00000020537	EXOSC2	100	95.222	ENSOCUG00000007138	EXOSC2	100	95.222	Oryctolagus_cuniculus
ENSCJAG00000020537	EXOSC2	100	77.474	ENSORLG00000007443	exosc2	100	77.474	Oryzias_latipes
ENSCJAG00000020537	EXOSC2	100	77.133	ENSORLG00020018902	exosc2	100	77.133	Oryzias_latipes_hni
ENSCJAG00000020537	EXOSC2	100	77.474	ENSORLG00015006767	exosc2	100	77.474	Oryzias_latipes_hsok
ENSCJAG00000020537	EXOSC2	100	76.451	ENSOMEG00000003533	exosc2	100	76.451	Oryzias_melastigma
ENSCJAG00000020537	EXOSC2	100	97.270	ENSOGAG00000007558	EXOSC2	100	97.270	Otolemur_garnettii
ENSCJAG00000020537	EXOSC2	100	95.932	ENSOARG00000007438	EXOSC2	100	95.932	Ovis_aries
ENSCJAG00000020537	EXOSC2	100	99.317	ENSPPAG00000034796	EXOSC2	100	99.317	Pan_paniscus
ENSCJAG00000020537	EXOSC2	100	96.928	ENSPPRG00000001089	EXOSC2	100	96.928	Panthera_pardus
ENSCJAG00000020537	EXOSC2	100	96.928	ENSPTIG00000021163	EXOSC2	100	96.928	Panthera_tigris_altaica
ENSCJAG00000020537	EXOSC2	100	99.317	ENSPTRG00000021476	EXOSC2	100	99.317	Pan_troglodytes
ENSCJAG00000020537	EXOSC2	100	99.317	ENSPTRG00000045766	-	100	99.317	Pan_troglodytes
ENSCJAG00000020537	EXOSC2	100	98.635	ENSPANG00000025966	EXOSC2	100	98.635	Papio_anubis
ENSCJAG00000020537	EXOSC2	99	80.277	ENSPKIG00000004271	exosc2	98	80.277	Paramormyrops_kingsleyae
ENSCJAG00000020537	EXOSC2	99	87.671	ENSPSIG00000006743	EXOSC2	99	87.671	Pelodiscus_sinensis
ENSCJAG00000020537	EXOSC2	86	79.051	ENSPMGG00000010980	exosc2	99	79.051	Periophthalmus_magnuspinnatus
ENSCJAG00000020537	EXOSC2	100	95.222	ENSPEMG00000006345	Exosc2	100	95.222	Peromyscus_maniculatus_bairdii
ENSCJAG00000020537	EXOSC2	100	76.271	ENSPMAG00000001280	exosc2	100	76.271	Petromyzon_marinus
ENSCJAG00000020537	EXOSC2	100	93.174	ENSPCIG00000024122	EXOSC2	97	93.174	Phascolarctos_cinereus
ENSCJAG00000020537	EXOSC2	99	76.451	ENSPFOG00000019819	exosc2	99	76.451	Poecilia_formosa
ENSCJAG00000020537	EXOSC2	99	76.712	ENSPLAG00000004605	exosc2	99	76.712	Poecilia_latipinna
ENSCJAG00000020537	EXOSC2	99	76.712	ENSPMEG00000010976	exosc2	99	76.712	Poecilia_mexicana
ENSCJAG00000020537	EXOSC2	99	76.370	ENSPREG00000014306	exosc2	99	76.370	Poecilia_reticulata
ENSCJAG00000020537	EXOSC2	100	98.976	ENSPPYG00000019695	EXOSC2	100	98.976	Pongo_abelii
ENSCJAG00000020537	EXOSC2	100	96.928	ENSPCAG00000013400	EXOSC2	100	96.928	Procavia_capensis
ENSCJAG00000020537	EXOSC2	100	97.270	ENSPCOG00000017639	EXOSC2	100	97.270	Propithecus_coquereli
ENSCJAG00000020537	EXOSC2	100	95.904	ENSPVAG00000001513	EXOSC2	100	95.904	Pteropus_vampyrus
ENSCJAG00000020537	EXOSC2	100	77.474	ENSPNYG00000007383	exosc2	100	77.474	Pundamilia_nyererei
ENSCJAG00000020537	EXOSC2	100	80.272	ENSPNAG00000014281	exosc2	100	80.272	Pygocentrus_nattereri
ENSCJAG00000020537	EXOSC2	100	94.881	ENSRNOG00000009245	Exosc2	100	94.881	Rattus_norvegicus
ENSCJAG00000020537	EXOSC2	100	98.635	ENSRBIG00000031203	-	100	98.635	Rhinopithecus_bieti
ENSCJAG00000020537	EXOSC2	99	92.123	ENSRBIG00000029791	-	99	92.123	Rhinopithecus_bieti
ENSCJAG00000020537	EXOSC2	99	90.411	ENSRROG00000043609	-	99	90.411	Rhinopithecus_roxellana
ENSCJAG00000020537	EXOSC2	100	98.635	ENSRROG00000010827	-	100	98.635	Rhinopithecus_roxellana
ENSCJAG00000020537	EXOSC2	89	41.216	YHR069C	-	82	41.216	Saccharomyces_cerevisiae
ENSCJAG00000020537	EXOSC2	100	99.317	ENSSBOG00000022712	EXOSC2	100	99.317	Saimiri_boliviensis_boliviensis
ENSCJAG00000020537	EXOSC2	100	92.150	ENSSHAG00000016050	EXOSC2	100	92.150	Sarcophilus_harrisii
ENSCJAG00000020537	EXOSC2	100	78.840	ENSSFOG00015011245	exosc2	100	78.840	Scleropages_formosus
ENSCJAG00000020537	EXOSC2	100	76.792	ENSSMAG00000003112	exosc2	100	76.792	Scophthalmus_maximus
ENSCJAG00000020537	EXOSC2	100	76.689	ENSSDUG00000004634	exosc2	100	76.689	Seriola_dumerili
ENSCJAG00000020537	EXOSC2	100	77.474	ENSSLDG00000010616	exosc2	100	77.474	Seriola_lalandi_dorsalis
ENSCJAG00000020537	EXOSC2	99	87.119	ENSSPUG00000013391	EXOSC2	99	87.119	Sphenodon_punctatus
ENSCJAG00000020537	EXOSC2	100	77.474	ENSSPAG00000022947	exosc2	100	77.474	Stegastes_partitus
ENSCJAG00000020537	EXOSC2	100	97.952	ENSSSCG00000005704	EXOSC2	100	97.952	Sus_scrofa
ENSCJAG00000020537	EXOSC2	99	82.534	ENSTGUG00000004697	EXOSC2	99	82.534	Taeniopygia_guttata
ENSCJAG00000020537	EXOSC2	100	73.038	ENSTRUG00000022436	exosc2	100	73.038	Takifugu_rubripes
ENSCJAG00000020537	EXOSC2	100	90.102	ENSTTRG00000015159	EXOSC2	100	90.102	Tursiops_truncatus
ENSCJAG00000020537	EXOSC2	95	94.224	ENSUAMG00000009651	EXOSC2	99	94.224	Ursus_americanus
ENSCJAG00000020537	EXOSC2	100	96.928	ENSUMAG00000018726	EXOSC2	100	96.928	Ursus_maritimus
ENSCJAG00000020537	EXOSC2	100	96.587	ENSVVUG00000027665	EXOSC2	100	96.587	Vulpes_vulpes
ENSCJAG00000020537	EXOSC2	100	79.181	ENSXETG00000001340	exosc2	100	79.181	Xenopus_tropicalis
ENSCJAG00000020537	EXOSC2	99	76.712	ENSXMAG00000005265	exosc2	99	76.712	Xiphophorus_maculatus