EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000020540 (Gene tree)
Gene ID: 100397080
Gene Symbol: PRDM12
Alias: PFM9
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 17656 bases
Position: chrNTIC01000001.1:37770316-37787971
Accession: 13997
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000038158	zf-C2H2	PF00096.26	1.2e-12	1	2
ENSCJAP00000038158	zf-C2H2	PF00096.26	1.2e-12	2	2
ENSCJAP00000038158	zf-met	PF12874.7	1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000040315	PRDM12-201	2733	-	ENSCJAP00000038158	360 (aa)	-	F7I4S5

Gene Model

Click here to download ENSCJAG00000020540's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000020540's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000020540	PRDM12	100	97.820	ENSG00000130711	PRDM12	100	97.820	Homo_sapiens
ENSCJAG00000020540	PRDM12	99	63.369	ENSAPOG00000018234	-	93	66.570	Acanthochromis_polyacanthus
ENSCJAG00000020540	PRDM12	99	74.740	ENSAPOG00000016051	prdm12b	90	80.290	Acanthochromis_polyacanthus
ENSCJAG00000020540	PRDM12	90	95.046	ENSAMEG00000016234	PRDM12	99	95.046	Ailuropoda_melanoleuca
ENSCJAG00000020540	PRDM12	99	75.648	ENSACIG00000005193	-	91	80.580	Amphilophus_citrinellus
ENSCJAG00000020540	PRDM12	92	79.539	ENSACIG00000019578	prdm12b	93	79.656	Amphilophus_citrinellus
ENSCJAG00000020540	PRDM12	99	75.789	ENSAOCG00000015040	prdm12b	92	79.714	Amphiprion_ocellaris
ENSCJAG00000020540	PRDM12	100	72.396	ENSAPEG00000022849	-	89	78.655	Amphiprion_percula
ENSCJAG00000020540	PRDM12	99	76.393	ENSAPEG00000015092	prdm12b	92	80.403	Amphiprion_percula
ENSCJAG00000020540	PRDM12	93	80.702	ENSATEG00000014595	-	96	82.067	Anabas_testudineus
ENSCJAG00000020540	PRDM12	94	100.000	ENSANAG00000020616	PRDM12	100	100.000	Aotus_nancymaae
ENSCJAG00000020540	PRDM12	99	77.929	ENSACLG00000011876	prdm12b	92	82.143	Astatotilapia_calliptera
ENSCJAG00000020540	PRDM12	90	80.994	ENSACLG00000007631	-	87	80.994	Astatotilapia_calliptera
ENSCJAG00000020540	PRDM12	99	78.729	ENSAMXG00000008540	PRDM12	90	84.049	Astyanax_mexicanus
ENSCJAG00000020540	PRDM12	99	82.162	ENSAMXG00000033665	prdm12b	90	88.024	Astyanax_mexicanus
ENSCJAG00000020540	PRDM12	100	98.892	ENSBTAG00000023797	PRDM12	100	98.892	Bos_taurus
ENSCJAG00000020540	PRDM12	88	97.196	ENSCAFG00000023076	PRDM12	99	97.196	Canis_familiaris
ENSCJAG00000020540	PRDM12	100	98.352	ENSCAFG00020024046	PRDM12	100	98.352	Canis_lupus_dingo
ENSCJAG00000020540	PRDM12	100	98.895	ENSCHIG00000025005	PRDM12	100	98.895	Capra_hircus
ENSCJAG00000020540	PRDM12	94	91.765	ENSCPOG00000005901	PRDM12	95	97.444	Cavia_porcellus
ENSCJAG00000020540	PRDM12	100	99.174	ENSCCAG00000037485	PRDM12	100	99.174	Cebus_capucinus
ENSCJAG00000020540	PRDM12	100	99.174	ENSCATG00000020327	PRDM12	100	99.174	Cercocebus_atys
ENSCJAG00000020540	PRDM12	93	97.305	ENSCLAG00000005499	PRDM12	92	97.305	Chinchilla_lanigera
ENSCJAG00000020540	PRDM12	100	98.901	ENSCSAG00000014756	PRDM12	100	98.901	Chlorocebus_sabaeus
ENSCJAG00000020540	PRDM12	100	90.000	ENSCPBG00000022628	PRDM12	94	92.814	Chrysemys_picta_bellii
ENSCJAG00000020540	PRDM12	100	96.995	ENSCGRG00001015005	Prdm12	100	96.995	Cricetulus_griseus_chok1gshd
ENSCJAG00000020540	PRDM12	99	70.854	ENSCVAG00000000944	-	90	77.493	Cyprinodon_variegatus
ENSCJAG00000020540	PRDM12	99	77.358	ENSCVAG00000017166	prdm12b	92	82.111	Cyprinodon_variegatus
ENSCJAG00000020540	PRDM12	99	82.337	ENSDARG00000007430	prdm12b	93	85.673	Danio_rerio
ENSCJAG00000020540	PRDM12	99	97.507	ENSDNOG00000042302	PRDM12	99	97.507	Dasypus_novemcinctus
ENSCJAG00000020540	PRDM12	90	62.963	ENSEBUG00000016780	prdm12b	78	64.387	Eptatretus_burgeri
ENSCJAG00000020540	PRDM12	100	98.619	ENSEASG00005008472	PRDM12	100	98.619	Equus_asinus_asinus
ENSCJAG00000020540	PRDM12	100	98.343	ENSECAG00000005933	PRDM12	100	98.343	Equus_caballus
ENSCJAG00000020540	PRDM12	99	81.769	ENSELUG00000009905	prdm12b	91	86.310	Esox_lucius
ENSCJAG00000020540	PRDM12	99	76.923	ENSELUG00000013674	PRDM12	89	83.025	Esox_lucius
ENSCJAG00000020540	PRDM12	100	98.623	ENSFCAG00000043086	PRDM12	100	98.623	Felis_catus
ENSCJAG00000020540	PRDM12	100	90.278	ENSFALG00000001445	PRDM12	84	93.114	Ficedula_albicollis
ENSCJAG00000020540	PRDM12	99	73.333	ENSFHEG00000007746	-	88	79.941	Fundulus_heteroclitus
ENSCJAG00000020540	PRDM12	99	77.005	ENSFHEG00000003944	prdm12b	92	81.686	Fundulus_heteroclitus
ENSCJAG00000020540	PRDM12	99	78.611	ENSGMOG00000011797	prdm12b	94	81.982	Gadus_morhua
ENSCJAG00000020540	PRDM12	100	90.278	ENSGALG00000003895	PRDM12	94	93.114	Gallus_gallus
ENSCJAG00000020540	PRDM12	100	77.067	ENSGAFG00000010827	prdm12b	90	82.596	Gambusia_affinis
ENSCJAG00000020540	PRDM12	100	77.394	ENSGACG00000016713	prdm12b	91	82.840	Gasterosteus_aculeatus
ENSCJAG00000020540	PRDM12	100	90.278	ENSGAGG00000014083	PRDM12	94	93.114	Gopherus_agassizii
ENSCJAG00000020540	PRDM12	100	97.814	ENSGGOG00000010568	PRDM12	100	97.814	Gorilla_gorilla
ENSCJAG00000020540	PRDM12	99	76.455	ENSHBUG00000022878	prdm12b	93	81.268	Haplochromis_burtoni
ENSCJAG00000020540	PRDM12	90	80.994	ENSHBUG00000022537	-	80	80.994	Haplochromis_burtoni
ENSCJAG00000020540	PRDM12	100	95.342	ENSHGLG00000013939	PRDM12	100	95.342	Heterocephalus_glaber_female
ENSCJAG00000020540	PRDM12	99	73.224	ENSHCOG00000021167	-	95	75.882	Hippocampus_comes
ENSCJAG00000020540	PRDM12	90	80.702	ENSHCOG00000003663	prdm12b	89	79.370	Hippocampus_comes
ENSCJAG00000020540	PRDM12	99	82.385	ENSIPUG00000017053	prdm12b	91	87.126	Ictalurus_punctatus
ENSCJAG00000020540	PRDM12	99	76.164	ENSIPUG00000019544	PRDM12	90	82.012	Ictalurus_punctatus
ENSCJAG00000020540	PRDM12	99	95.531	ENSSTOG00000005986	PRDM12	87	98.802	Ictidomys_tridecemlineatus
ENSCJAG00000020540	PRDM12	92	98.485	ENSJJAG00000005424	Prdm12	100	98.485	Jaculus_jaculus
ENSCJAG00000020540	PRDM12	91	77.562	ENSKMAG00000016921	prdm12b	89	78.212	Kryptolebias_marmoratus
ENSCJAG00000020540	PRDM12	99	76.309	ENSKMAG00000021205	-	92	81.040	Kryptolebias_marmoratus
ENSCJAG00000020540	PRDM12	99	77.249	ENSLBEG00000017769	prdm12b	88	84.132	Labrus_bergylta
ENSCJAG00000020540	PRDM12	99	75.328	ENSLBEG00000007776	-	89	81.306	Labrus_bergylta
ENSCJAG00000020540	PRDM12	99	87.465	ENSLACG00000017560	PRDM12	94	90.090	Latimeria_chalumnae
ENSCJAG00000020540	PRDM12	99	82.466	ENSLOCG00000005429	prdm12b	93	86.726	Lepisosteus_oculatus
ENSCJAG00000020540	PRDM12	96	97.727	ENSLAFG00000006979	PRDM12	94	97.727	Loxodonta_africana
ENSCJAG00000020540	PRDM12	100	97.275	ENSMFAG00000040322	PRDM12	100	97.275	Macaca_fascicularis
ENSCJAG00000020540	PRDM12	100	99.174	ENSMNEG00000037234	PRDM12	100	99.174	Macaca_nemestrina
ENSCJAG00000020540	PRDM12	99	76.517	ENSMAMG00000013212	prdm12b	90	83.086	Mastacembelus_armatus
ENSCJAG00000020540	PRDM12	90	80.952	ENSMAMG00000018988	-	86	80.952	Mastacembelus_armatus
ENSCJAG00000020540	PRDM12	90	80.994	ENSMZEG00005000415	PRDM12	86	80.994	Maylandia_zebra
ENSCJAG00000020540	PRDM12	98	90.678	ENSMGAG00000005438	PRDM12	94	93.114	Meleagris_gallopavo
ENSCJAG00000020540	PRDM12	100	95.890	ENSMAUG00000013040	Prdm12	100	95.890	Mesocricetus_auratus
ENSCJAG00000020540	PRDM12	100	98.066	ENSMICG00000015480	PRDM12	100	98.066	Microcebus_murinus
ENSCJAG00000020540	PRDM12	98	96.023	ENSMOCG00000021026	Prdm12	93	98.246	Microtus_ochrogaster
ENSCJAG00000020540	PRDM12	100	92.222	ENSMODG00000012108	PRDM12	94	95.210	Monodelphis_domestica
ENSCJAG00000020540	PRDM12	99	67.200	ENSMALG00000021901	prdm12b	88	71.171	Monopterus_albus
ENSCJAG00000020540	PRDM12	100	96.986	MGP_CAROLIEiJ_G0023414	Prdm12	100	96.986	Mus_caroli
ENSCJAG00000020540	PRDM12	100	96.986	ENSMUSG00000079466	Prdm12	100	96.986	Mus_musculus
ENSCJAG00000020540	PRDM12	100	96.986	MGP_PahariEiJ_G0024871	Prdm12	100	96.986	Mus_pahari
ENSCJAG00000020540	PRDM12	100	96.986	MGP_SPRETEiJ_G0024331	Prdm12	100	96.986	Mus_spretus
ENSCJAG00000020540	PRDM12	100	95.000	ENSNGAG00000018480	Prdm12	100	95.000	Nannospalax_galili
ENSCJAG00000020540	PRDM12	99	72.703	ENSNBRG00000024312	-	95	76.316	Neolamprologus_brichardi
ENSCJAG00000020540	PRDM12	99	74.935	ENSNBRG00000006727	prdm12b	93	80.571	Neolamprologus_brichardi
ENSCJAG00000020540	PRDM12	100	82.222	ENSMEUG00000003828	PRDM12	94	84.431	Notamacropus_eugenii
ENSCJAG00000020540	PRDM12	92	98.182	ENSOPRG00000008680	PRDM12	100	98.182	Ochotona_princeps
ENSCJAG00000020540	PRDM12	95	97.668	ENSODEG00000016282	PRDM12	64	97.668	Octodon_degus
ENSCJAG00000020540	PRDM12	62	90.583	ENSOANG00000001043	PRDM12	91	95.939	Ornithorhynchus_anatinus
ENSCJAG00000020540	PRDM12	87	92.971	ENSOCUG00000008241	PRDM12	98	94.098	Oryctolagus_cuniculus
ENSCJAG00000020540	PRDM12	99	76.676	ENSORLG00000007114	prdm12b	92	81.268	Oryzias_latipes
ENSCJAG00000020540	PRDM12	90	79.472	ENSORLG00000017558	-	87	80.059	Oryzias_latipes
ENSCJAG00000020540	PRDM12	90	79.240	ENSORLG00020013167	-	87	79.825	Oryzias_latipes_hni
ENSCJAG00000020540	PRDM12	92	80.115	ENSORLG00020019565	prdm12b	91	80.980	Oryzias_latipes_hni
ENSCJAG00000020540	PRDM12	90	79.472	ENSORLG00015003435	-	87	80.059	Oryzias_latipes_hsok
ENSCJAG00000020540	PRDM12	100	75.198	ENSORLG00015007621	prdm12b	92	80.692	Oryzias_latipes_hsok
ENSCJAG00000020540	PRDM12	99	76.064	ENSOMEG00000004134	prdm12b	91	80.000	Oryzias_melastigma
ENSCJAG00000020540	PRDM12	99	74.346	ENSOMEG00000007762	-	94	78.348	Oryzias_melastigma
ENSCJAG00000020540	PRDM12	93	99.399	ENSOGAG00000007557	PRDM12	100	99.399	Otolemur_garnettii
ENSCJAG00000020540	PRDM12	80	99.303	ENSPPAG00000031506	-	97	99.303	Pan_paniscus
ENSCJAG00000020540	PRDM12	100	88.089	ENSPPRG00000023024	PRDM12	86	90.746	Panthera_pardus
ENSCJAG00000020540	PRDM12	100	98.087	ENSPTRG00000021475	PRDM12	100	98.087	Pan_troglodytes
ENSCJAG00000020540	PRDM12	100	98.087	ENSPTRG00000043324	-	100	98.087	Pan_troglodytes
ENSCJAG00000020540	PRDM12	100	99.174	ENSPANG00000025967	PRDM12	100	99.174	Papio_anubis
ENSCJAG00000020540	PRDM12	99	81.551	ENSPKIG00000007228	prdm12b	94	85.345	Paramormyrops_kingsleyae
ENSCJAG00000020540	PRDM12	95	78.063	ENSPKIG00000004305	PRDM12	94	80.539	Paramormyrops_kingsleyae
ENSCJAG00000020540	PRDM12	100	89.444	ENSPSIG00000006739	PRDM12	94	92.216	Pelodiscus_sinensis
ENSCJAG00000020540	PRDM12	100	77.128	ENSPMGG00000008867	prdm12b	92	81.924	Periophthalmus_magnuspinnatus
ENSCJAG00000020540	PRDM12	99	73.698	ENSPMGG00000002356	-	88	81.250	Periophthalmus_magnuspinnatus
ENSCJAG00000020540	PRDM12	96	95.389	ENSPEMG00000009969	Prdm12	91	98.494	Peromyscus_maniculatus_bairdii
ENSCJAG00000020540	PRDM12	100	92.500	ENSPCIG00000024119	PRDM12	94	95.509	Phascolarctos_cinereus
ENSCJAG00000020540	PRDM12	99	78.437	ENSPFOG00000019841	prdm12b	93	82.216	Poecilia_formosa
ENSCJAG00000020540	PRDM12	91	83.036	ENSPLAG00000016626	prdm12b	90	82.891	Poecilia_latipinna
ENSCJAG00000020540	PRDM12	89	82.067	ENSPMEG00000016698	prdm12b	89	82.371	Poecilia_mexicana
ENSCJAG00000020540	PRDM12	91	82.891	ENSPREG00000015073	prdm12b	89	82.749	Poecilia_reticulata
ENSCJAG00000020540	PRDM12	96	74.022	ENSPREG00000003211	-	90	78.049	Poecilia_reticulata
ENSCJAG00000020540	PRDM12	98	97.721	ENSPPYG00000019694	PRDM12	100	97.721	Pongo_abelii
ENSCJAG00000020540	PRDM12	100	97.541	ENSPCOG00000022255	PRDM12	100	97.541	Propithecus_coquereli
ENSCJAG00000020540	PRDM12	100	96.721	ENSPVAG00000001511	PRDM12	100	96.721	Pteropus_vampyrus
ENSCJAG00000020540	PRDM12	90	80.994	ENSPNYG00000013589	-	86	80.994	Pundamilia_nyererei
ENSCJAG00000020540	PRDM12	99	75.789	ENSPNYG00000009607	prdm12b	93	80.516	Pundamilia_nyererei
ENSCJAG00000020540	PRDM12	99	82.880	ENSPNAG00000024532	prdm12b	91	88.323	Pygocentrus_nattereri
ENSCJAG00000020540	PRDM12	99	74.462	ENSPNAG00000013396	PRDM12	88	80.606	Pygocentrus_nattereri
ENSCJAG00000020540	PRDM12	100	96.986	ENSRNOG00000009218	Prdm12	100	96.986	Rattus_norvegicus
ENSCJAG00000020540	PRDM12	88	100.000	ENSRBIG00000042712	PRDM12	91	97.568	Rhinopithecus_bieti
ENSCJAG00000020540	PRDM12	89	100.000	ENSRROG00000043554	PRDM12	100	100.000	Rhinopithecus_roxellana
ENSCJAG00000020540	PRDM12	100	91.690	ENSSHAG00000015972	PRDM12	94	94.627	Sarcophilus_harrisii
ENSCJAG00000020540	PRDM12	99	73.469	ENSSMAG00000003754	prdm12b	90	79.772	Scophthalmus_maximus
ENSCJAG00000020540	PRDM12	99	75.515	ENSSDUG00000023498	prdm12b	90	80.925	Seriola_dumerili
ENSCJAG00000020540	PRDM12	94	81.105	ENSSDUG00000019071	-	90	83.180	Seriola_dumerili
ENSCJAG00000020540	PRDM12	99	79.006	ENSSLDG00000013562	-	93	84.049	Seriola_lalandi_dorsalis
ENSCJAG00000020540	PRDM12	99	75.844	ENSSLDG00000009557	prdm12b	90	81.341	Seriola_lalandi_dorsalis
ENSCJAG00000020540	PRDM12	100	89.722	ENSSPUG00000013424	PRDM12	94	92.515	Sphenodon_punctatus
ENSCJAG00000020540	PRDM12	99	75.591	ENSSPAG00000018824	prdm12b	90	81.871	Stegastes_partitus
ENSCJAG00000020540	PRDM12	99	64.467	ENSSPAG00000022420	-	87	74.769	Stegastes_partitus
ENSCJAG00000020540	PRDM12	100	98.352	ENSSSCG00000005703	PRDM12	100	98.352	Sus_scrofa
ENSCJAG00000020540	PRDM12	99	77.807	ENSTRUG00000018659	prdm12b	92	82.111	Takifugu_rubripes
ENSCJAG00000020540	PRDM12	99	76.294	ENSTRUG00000013239	-	93	81.627	Takifugu_rubripes
ENSCJAG00000020540	PRDM12	99	78.133	ENSTNIG00000009020	prdm12b	91	83.186	Tetraodon_nigroviridis
ENSCJAG00000020540	PRDM12	99	76.099	ENSTNIG00000005859	-	92	80.547	Tetraodon_nigroviridis
ENSCJAG00000020540	PRDM12	97	98.567	ENSUAMG00000009653	PRDM12	97	98.567	Ursus_americanus
ENSCJAG00000020540	PRDM12	92	99.398	ENSVVUG00000027662	PRDM12	79	99.398	Vulpes_vulpes
ENSCJAG00000020540	PRDM12	100	77.480	ENSXCOG00000002836	prdm12b	91	82.596	Xiphophorus_couchianus
ENSCJAG00000020540	PRDM12	99	72.194	ENSXMAG00000028012	-	88	80.000	Xiphophorus_maculatus
ENSCJAG00000020540	PRDM12	99	77.067	ENSXMAG00000005537	prdm12b	91	82.111	Xiphophorus_maculatus