EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000020573 (Gene tree)
Gene ID: 100413084
Gene Symbol: RBM17
Alias: MGC14439|SPF45
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 27950 bases
Position: chrNTIC01036611.1:148473474-148501423
Accession: 100413084
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000038237	RRM_1	PF00076.22	0.00011	1	1
ENSCJAP00000038250	RRM_1	PF00076.22	0.00012	1	1
ENSCJAP00000038237	G-patch	PF01585.23	7.4e-13	1	1
ENSCJAP00000038250	G-patch	PF01585.23	7.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000040398	RBM17-202	1173	-	ENSCJAP00000038237	390 (aa)	-	F7IT98
ENSCJAT00000040411	RBM17-201	1563	-	ENSCJAP00000038250	401 (aa)	XP_002750072	F7INM9

Gene Model

Click here to download ENSCJAG00000020573's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000020573's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000020573	RBM17	100	99.501	ENSG00000134453	RBM17	100	99.528	Homo_sapiens
ENSCJAG00000020573	RBM17	99	83.168	ENSAPOG00000007101	rbm17	99	83.375	Acanthochromis_polyacanthus
ENSCJAG00000020573	RBM17	100	99.252	ENSAMEG00000002107	RBM17	100	99.252	Ailuropoda_melanoleuca
ENSCJAG00000020573	RBM17	100	79.412	ENSACIG00000006251	rbm17	100	79.412	Amphilophus_citrinellus
ENSCJAG00000020573	RBM17	100	83.292	ENSAOCG00000014892	rbm17	100	83.292	Amphiprion_ocellaris
ENSCJAG00000020573	RBM17	100	83.292	ENSAPEG00000022779	rbm17	100	83.292	Amphiprion_percula
ENSCJAG00000020573	RBM17	100	79.245	ENSATEG00000004406	rbm17	100	79.245	Anabas_testudineus
ENSCJAG00000020573	RBM17	100	95.771	ENSAPLG00000004190	RBM17	100	95.771	Anas_platyrhynchos
ENSCJAG00000020573	RBM17	89	90.541	ENSACAG00000005418	RBM17	99	90.811	Anolis_carolinensis
ENSCJAG00000020573	RBM17	100	100.000	ENSANAG00000030127	RBM17	100	100.000	Aotus_nancymaae
ENSCJAG00000020573	RBM17	100	85.075	ENSANAG00000019330	-	97	94.915	Aotus_nancymaae
ENSCJAG00000020573	RBM17	100	80.905	ENSACLG00000003928	rbm17	100	80.905	Astatotilapia_calliptera
ENSCJAG00000020573	RBM17	100	77.638	ENSAMXG00000005853	rbm17	100	80.402	Astyanax_mexicanus
ENSCJAG00000020573	RBM17	100	99.002	ENSBTAG00000021951	RBM17	100	99.002	Bos_taurus
ENSCJAG00000020573	RBM17	100	97.506	ENSBTAG00000011094	-	100	97.506	Bos_taurus
ENSCJAG00000020573	RBM17	73	34.448	WBGene00010233	F58B3.7	91	32.817	Caenorhabditis_elegans
ENSCJAG00000020573	RBM17	100	99.252	ENSCAFG00000005206	RBM17	100	99.252	Canis_familiaris
ENSCJAG00000020573	RBM17	100	97.692	ENSCAFG00020005420	RBM17	100	97.692	Canis_lupus_dingo
ENSCJAG00000020573	RBM17	100	99.002	ENSCHIG00000023204	-	100	99.002	Capra_hircus
ENSCJAG00000020573	RBM17	100	96.259	ENSCHIG00000019921	-	100	96.259	Capra_hircus
ENSCJAG00000020573	RBM17	100	97.531	ENSTSYG00000001165	RBM17	100	97.531	Carlito_syrichta
ENSCJAG00000020573	RBM17	96	78.342	ENSCAPG00000006275	RBM17	100	82.817	Cavia_aperea
ENSCJAG00000020573	RBM17	100	95.939	ENSCPOG00000005679	RBM17	99	95.939	Cavia_porcellus
ENSCJAG00000020573	RBM17	100	100.000	ENSCCAG00000018655	RBM17	100	100.000	Cebus_capucinus
ENSCJAG00000020573	RBM17	100	99.501	ENSCATG00000041566	RBM17	100	99.501	Cercocebus_atys
ENSCJAG00000020573	RBM17	100	98.272	ENSCLAG00000012195	RBM17	99	98.272	Chinchilla_lanigera
ENSCJAG00000020573	RBM17	100	99.501	ENSCSAG00000013564	RBM17	100	99.501	Chlorocebus_sabaeus
ENSCJAG00000020573	RBM17	92	79.459	ENSCHOG00000005131	RBM17	100	79.459	Choloepus_hoffmanni
ENSCJAG00000020573	RBM17	100	94.776	ENSCPBG00000019836	RBM17	100	94.776	Chrysemys_picta_bellii
ENSCJAG00000020573	RBM17	100	47.229	ENSCSAVG00000008782	-	100	45.652	Ciona_savignyi
ENSCJAG00000020573	RBM17	98	85.459	ENSCANG00000023715	-	100	85.459	Colobus_angolensis_palliatus
ENSCJAG00000020573	RBM17	100	99.252	ENSCANG00000030987	RBM17	100	99.252	Colobus_angolensis_palliatus
ENSCJAG00000020573	RBM17	100	76.060	ENSCGRG00001009256	-	100	73.827	Cricetulus_griseus_chok1gshd
ENSCJAG00000020573	RBM17	100	98.519	ENSCGRG00001013842	Rbm17	100	98.519	Cricetulus_griseus_chok1gshd
ENSCJAG00000020573	RBM17	100	98.519	ENSCGRG00000006907	Rbm17	100	98.519	Cricetulus_griseus_crigri
ENSCJAG00000020573	RBM17	100	79.557	ENSCSEG00000018164	rbm17	100	80.296	Cynoglossus_semilaevis
ENSCJAG00000020573	RBM17	100	76.590	ENSCVAG00000002476	rbm17	100	78.880	Cyprinodon_variegatus
ENSCJAG00000020573	RBM17	100	78.118	ENSDARG00000031346	rbm17	100	78.118	Danio_rerio
ENSCJAG00000020573	RBM17	100	99.002	ENSDNOG00000035920	RBM17	100	99.002	Dasypus_novemcinctus
ENSCJAG00000020573	RBM17	99	36.203	FBgn0086683	Spf45	99	36.476	Drosophila_melanogaster
ENSCJAG00000020573	RBM17	100	75.062	ENSETEG00000006642	RBM17	87	97.183	Echinops_telfairi
ENSCJAG00000020573	RBM17	64	70.732	ENSEBUG00000010253	rbm17	85	70.732	Eptatretus_burgeri
ENSCJAG00000020573	RBM17	100	95.696	ENSEASG00005019205	-	100	95.696	Equus_asinus_asinus
ENSCJAG00000020573	RBM17	92	95.946	ENSEASG00005009236	-	100	95.946	Equus_asinus_asinus
ENSCJAG00000020573	RBM17	100	85.641	ENSECAG00000008939	RBM17	100	87.949	Equus_caballus
ENSCJAG00000020573	RBM17	100	88.529	ENSECAG00000001379	-	100	88.529	Equus_caballus
ENSCJAG00000020573	RBM17	86	80.814	ENSEEUG00000013077	RBM17	100	80.814	Erinaceus_europaeus
ENSCJAG00000020573	RBM17	100	77.546	ENSELUG00000006440	rbm17	100	77.546	Esox_lucius
ENSCJAG00000020573	RBM17	100	99.252	ENSFCAG00000031988	RBM17	100	99.252	Felis_catus
ENSCJAG00000020573	RBM17	100	94.763	ENSFALG00000001790	RBM17	100	94.763	Ficedula_albicollis
ENSCJAG00000020573	RBM17	100	98.272	ENSFDAG00000007470	RBM17	100	98.272	Fukomys_damarensis
ENSCJAG00000020573	RBM17	100	80.303	ENSFHEG00000001266	rbm17	100	81.061	Fundulus_heteroclitus
ENSCJAG00000020573	RBM17	99	75.772	ENSGMOG00000008438	rbm17	100	75.772	Gadus_morhua
ENSCJAG00000020573	RBM17	100	95.761	ENSGALG00000006332	RBM17	100	95.761	Gallus_gallus
ENSCJAG00000020573	RBM17	100	80.835	ENSGAFG00000019879	rbm17	100	81.572	Gambusia_affinis
ENSCJAG00000020573	RBM17	99	81.527	ENSGACG00000019174	rbm17	99	81.527	Gasterosteus_aculeatus
ENSCJAG00000020573	RBM17	100	94.776	ENSGAGG00000019906	RBM17	100	94.776	Gopherus_agassizii
ENSCJAG00000020573	RBM17	100	83.784	ENSHBUG00000016624	rbm17	100	83.784	Haplochromis_burtoni
ENSCJAG00000020573	RBM17	100	98.272	ENSHGLG00000011580	RBM17	100	98.272	Heterocephalus_glaber_female
ENSCJAG00000020573	RBM17	100	75.888	ENSHGLG00100010556	-	100	74.873	Heterocephalus_glaber_male
ENSCJAG00000020573	RBM17	100	98.272	ENSHGLG00100010460	RBM17	100	98.272	Heterocephalus_glaber_male
ENSCJAG00000020573	RBM17	99	78.282	ENSHCOG00000010865	rbm17	100	78.282	Hippocampus_comes
ENSCJAG00000020573	RBM17	100	77.518	ENSIPUG00000007699	Rbm17	100	77.518	Ictalurus_punctatus
ENSCJAG00000020573	RBM17	100	98.765	ENSSTOG00000013591	RBM17	100	98.765	Ictidomys_tridecemlineatus
ENSCJAG00000020573	RBM17	100	73.815	ENSJJAG00000000993	-	100	70.471	Jaculus_jaculus
ENSCJAG00000020573	RBM17	100	98.519	ENSJJAG00000022886	Rbm17	100	98.519	Jaculus_jaculus
ENSCJAG00000020573	RBM17	100	80.702	ENSKMAG00000021400	rbm17	100	79.853	Kryptolebias_marmoratus
ENSCJAG00000020573	RBM17	100	82.555	ENSLBEG00000000881	rbm17	100	79.245	Labrus_bergylta
ENSCJAG00000020573	RBM17	99	69.176	ENSLACG00000017297	RBM17	99	69.176	Latimeria_chalumnae
ENSCJAG00000020573	RBM17	100	87.160	ENSLOCG00000015659	rbm17	100	87.160	Lepisosteus_oculatus
ENSCJAG00000020573	RBM17	100	98.034	ENSLAFG00000011629	RBM17	100	98.034	Loxodonta_africana
ENSCJAG00000020573	RBM17	100	99.501	ENSMFAG00000035521	RBM17	100	99.501	Macaca_fascicularis
ENSCJAG00000020573	RBM17	100	99.501	ENSMMUG00000015152	RBM17	100	99.501	Macaca_mulatta
ENSCJAG00000020573	RBM17	100	99.501	ENSMNEG00000017264	RBM17	100	99.501	Macaca_nemestrina
ENSCJAG00000020573	RBM17	100	99.501	ENSMLEG00000029340	RBM17	100	99.501	Mandrillus_leucophaeus
ENSCJAG00000020573	RBM17	100	78.066	ENSMAMG00000000387	rbm17	100	78.066	Mastacembelus_armatus
ENSCJAG00000020573	RBM17	100	80.905	ENSMZEG00005015179	rbm17	100	80.905	Maylandia_zebra
ENSCJAG00000020573	RBM17	100	93.873	ENSMGAG00000003981	RBM17	100	93.873	Meleagris_gallopavo
ENSCJAG00000020573	RBM17	100	98.519	ENSMAUG00000019247	Rbm17	100	98.519	Mesocricetus_auratus
ENSCJAG00000020573	RBM17	100	98.025	ENSMICG00000003976	-	100	98.025	Microcebus_murinus
ENSCJAG00000020573	RBM17	100	90.465	ENSMICG00000041489	-	100	90.465	Microcebus_murinus
ENSCJAG00000020573	RBM17	93	80.267	ENSMOCG00000014517	-	99	80.267	Microtus_ochrogaster
ENSCJAG00000020573	RBM17	100	98.519	ENSMOCG00000011847	Rbm17	100	98.519	Microtus_ochrogaster
ENSCJAG00000020573	RBM17	100	75.669	ENSMMOG00000010264	rbm17	100	74.453	Mola_mola
ENSCJAG00000020573	RBM17	100	98.005	ENSMODG00000016648	RBM17	100	98.005	Monodelphis_domestica
ENSCJAG00000020573	RBM17	100	79.442	ENSMALG00000010597	rbm17	100	80.353	Monopterus_albus
ENSCJAG00000020573	RBM17	100	98.272	MGP_CAROLIEiJ_G0023173	Rbm17	100	98.272	Mus_caroli
ENSCJAG00000020573	RBM17	100	98.272	ENSMUSG00000037197	Rbm17	100	98.272	Mus_musculus
ENSCJAG00000020573	RBM17	100	97.778	MGP_PahariEiJ_G0019233	Rbm17	100	97.778	Mus_pahari
ENSCJAG00000020573	RBM17	100	98.272	MGP_SPRETEiJ_G0024091	Rbm17	100	98.272	Mus_spretus
ENSCJAG00000020573	RBM17	86	98.555	ENSMPUG00000016359	RBM17	97	98.555	Mustela_putorius_furo
ENSCJAG00000020573	RBM17	100	93.516	ENSMLUG00000025709	-	100	93.516	Myotis_lucifugus
ENSCJAG00000020573	RBM17	100	96.305	ENSMLUG00000002302	-	100	96.305	Myotis_lucifugus
ENSCJAG00000020573	RBM17	100	98.519	ENSNGAG00000000741	Rbm17	100	98.519	Nannospalax_galili
ENSCJAG00000020573	RBM17	100	69.327	ENSNGAG00000000663	-	100	68.905	Nannospalax_galili
ENSCJAG00000020573	RBM17	100	80.203	ENSNBRG00000018148	rbm17	100	80.203	Neolamprologus_brichardi
ENSCJAG00000020573	RBM17	100	99.501	ENSNLEG00000033350	RBM17	100	99.501	Nomascus_leucogenys
ENSCJAG00000020573	RBM17	100	92.020	ENSMEUG00000011347	RBM17	100	92.020	Notamacropus_eugenii
ENSCJAG00000020573	RBM17	100	85.786	ENSOPRG00000002993	RBM17	100	85.786	Ochotona_princeps
ENSCJAG00000020573	RBM17	97	74.809	ENSODEG00000007286	-	99	74.809	Octodon_degus
ENSCJAG00000020573	RBM17	100	97.537	ENSODEG00000004393	RBM17	100	97.537	Octodon_degus
ENSCJAG00000020573	RBM17	100	83.784	ENSONIG00000011838	rbm17	100	83.784	Oreochromis_niloticus
ENSCJAG00000020573	RBM17	100	96.526	ENSOANG00000015455	RBM17	100	96.526	Ornithorhynchus_anatinus
ENSCJAG00000020573	RBM17	100	80.605	ENSORLG00000028798	rbm17	100	80.835	Oryzias_latipes
ENSCJAG00000020573	RBM17	100	81.218	ENSORLG00020004593	rbm17	100	81.218	Oryzias_latipes_hni
ENSCJAG00000020573	RBM17	100	83.784	ENSORLG00015000033	rbm17	100	83.784	Oryzias_latipes_hsok
ENSCJAG00000020573	RBM17	100	79.953	ENSOMEG00000012060	rbm17	100	88.050	Oryzias_melastigma
ENSCJAG00000020573	RBM17	100	98.025	ENSOGAG00000015687	RBM17	100	98.025	Otolemur_garnettii
ENSCJAG00000020573	RBM17	100	99.002	ENSOARG00000012975	RBM17	100	99.002	Ovis_aries
ENSCJAG00000020573	RBM17	100	99.501	ENSPPAG00000032347	RBM17	100	99.501	Pan_paniscus
ENSCJAG00000020573	RBM17	100	99.252	ENSPPRG00000010706	RBM17	100	99.252	Panthera_pardus
ENSCJAG00000020573	RBM17	100	99.252	ENSPTIG00000007596	RBM17	100	99.252	Panthera_tigris_altaica
ENSCJAG00000020573	RBM17	100	99.501	ENSPTRG00000002265	RBM17	100	99.501	Pan_troglodytes
ENSCJAG00000020573	RBM17	100	99.501	ENSPANG00000023425	RBM17	100	99.501	Papio_anubis
ENSCJAG00000020573	RBM17	100	80.706	ENSPKIG00000025526	rbm17	100	80.516	Paramormyrops_kingsleyae
ENSCJAG00000020573	RBM17	100	79.241	ENSPKIG00000005048	-	100	79.241	Paramormyrops_kingsleyae
ENSCJAG00000020573	RBM17	100	93.580	ENSPSIG00000012332	RBM17	100	93.580	Pelodiscus_sinensis
ENSCJAG00000020573	RBM17	100	79.250	ENSPMGG00000007980	rbm17	100	79.250	Periophthalmus_magnuspinnatus
ENSCJAG00000020573	RBM17	100	98.519	ENSPEMG00000014320	Rbm17	100	98.519	Peromyscus_maniculatus_bairdii
ENSCJAG00000020573	RBM17	100	97.767	ENSPCIG00000019260	-	100	97.767	Phascolarctos_cinereus
ENSCJAG00000020573	RBM17	100	78.302	ENSPFOG00000013271	rbm17	100	79.009	Poecilia_formosa
ENSCJAG00000020573	RBM17	100	79.949	ENSPLAG00000004455	rbm17	100	80.203	Poecilia_latipinna
ENSCJAG00000020573	RBM17	100	82.310	ENSPMEG00000014864	rbm17	100	82.310	Poecilia_mexicana
ENSCJAG00000020573	RBM17	100	80.000	ENSPREG00000015589	rbm17	100	80.000	Poecilia_reticulata
ENSCJAG00000020573	RBM17	99	71.930	ENSPPYG00000019881	-	100	71.679	Pongo_abelii
ENSCJAG00000020573	RBM17	81	71.207	ENSPPYG00000019042	-	100	70.898	Pongo_abelii
ENSCJAG00000020573	RBM17	100	99.501	ENSPPYG00000002067	RBM17	100	99.501	Pongo_abelii
ENSCJAG00000020573	RBM17	100	91.272	ENSPCAG00000016879	RBM17	100	91.272	Procavia_capensis
ENSCJAG00000020573	RBM17	100	99.252	ENSPCOG00000027881	RBM17	100	99.252	Propithecus_coquereli
ENSCJAG00000020573	RBM17	100	88.030	ENSPVAG00000015499	RBM17	100	86.534	Pteropus_vampyrus
ENSCJAG00000020573	RBM17	100	78.517	ENSPNYG00000015274	rbm17	100	78.772	Pundamilia_nyererei
ENSCJAG00000020573	RBM17	100	79.529	ENSPNAG00000030046	rbm17	100	79.899	Pygocentrus_nattereri
ENSCJAG00000020573	RBM17	100	98.519	ENSRNOG00000018767	Rbm17	100	98.519	Rattus_norvegicus
ENSCJAG00000020573	RBM17	100	99.501	ENSRBIG00000043727	RBM17	100	99.501	Rhinopithecus_bieti
ENSCJAG00000020573	RBM17	100	99.501	ENSRROG00000044142	RBM17	100	99.501	Rhinopithecus_roxellana
ENSCJAG00000020573	RBM17	100	99.751	ENSSBOG00000031661	-	100	99.751	Saimiri_boliviensis_boliviensis
ENSCJAG00000020573	RBM17	100	88.806	ENSSBOG00000023653	-	100	88.806	Saimiri_boliviensis_boliviensis
ENSCJAG00000020573	RBM17	100	98.005	ENSSHAG00000012480	-	100	98.005	Sarcophilus_harrisii
ENSCJAG00000020573	RBM17	100	82.555	ENSSFOG00015009892	rbm17	100	82.555	Scleropages_formosus
ENSCJAG00000020573	RBM17	100	81.170	ENSSMAG00000012368	rbm17	100	80.051	Scophthalmus_maximus
ENSCJAG00000020573	RBM17	100	82.324	ENSSDUG00000015015	rbm17	100	82.324	Seriola_dumerili
ENSCJAG00000020573	RBM17	100	82.324	ENSSLDG00000014486	rbm17	100	82.324	Seriola_lalandi_dorsalis
ENSCJAG00000020573	RBM17	59	78.814	ENSSARG00000001792	-	100	78.814	Sorex_araneus
ENSCJAG00000020573	RBM17	99	95.262	ENSSPUG00000001036	RBM17	99	95.262	Sphenodon_punctatus
ENSCJAG00000020573	RBM17	100	83.047	ENSSPAG00000002338	rbm17	100	83.047	Stegastes_partitus
ENSCJAG00000020573	RBM17	100	98.753	ENSSSCG00000011134	RBM17	100	98.753	Sus_scrofa
ENSCJAG00000020573	RBM17	100	94.074	ENSTGUG00000002013	RBM17	100	94.074	Taeniopygia_guttata
ENSCJAG00000020573	RBM17	100	83.005	ENSTRUG00000010698	rbm17	100	83.005	Takifugu_rubripes
ENSCJAG00000020573	RBM17	100	82.885	ENSTNIG00000006892	rbm17	100	82.885	Tetraodon_nigroviridis
ENSCJAG00000020573	RBM17	100	77.556	ENSTBEG00000014686	RBM17	100	77.556	Tupaia_belangeri
ENSCJAG00000020573	RBM17	90	98.889	ENSTTRG00000001344	RBM17	100	98.889	Tursiops_truncatus
ENSCJAG00000020573	RBM17	100	96.684	ENSUAMG00000009499	RBM17	100	96.684	Ursus_americanus
ENSCJAG00000020573	RBM17	100	99.002	ENSUMAG00000012237	RBM17	100	99.002	Ursus_maritimus
ENSCJAG00000020573	RBM17	100	84.539	ENSVPAG00000005497	RBM17	100	84.539	Vicugna_pacos
ENSCJAG00000020573	RBM17	100	97.692	ENSVVUG00000006780	RBM17	100	97.692	Vulpes_vulpes
ENSCJAG00000020573	RBM17	99	86.318	ENSXETG00000018123	rbm17	100	86.318	Xenopus_tropicalis
ENSCJAG00000020573	RBM17	100	80.835	ENSXMAG00000008674	rbm17	100	81.572	Xiphophorus_maculatus