EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000021080 (Gene tree)
Gene ID: 100414293
Gene Symbol: RAD54L
Alias: RAD54A|hHR54|hRAD54
Full Name: RAD54 like
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 32921 bases
Position: chrNTIC01036611.1:75100670-75133590
Accession: 9826
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000039278	ResIII	PF04851.15	3.1e-09	1	1
ENSCJAP00000039263	ResIII	PF04851.15	1e-08	1	1
ENSCJAP00000039278	DEAD	PF00270.29	8.9e-07	1	1
ENSCJAP00000039263	DEAD	PF00270.29	1.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000041496	RAD54L-202	3125	-	ENSCJAP00000039278	727 (aa)	-	F7F1I8
ENSCJAT00000041480	RAD54L-201	3305	-	ENSCJAP00000039263	787 (aa)	-	F7F1Z2
ENSCJAT00000041491	RAD54L-203	1560	-	ENSCJAP00000039273	519 (aa)	-	F7F1L2

Gene Model

Click here to download ENSCJAG00000021080's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc03440	Homologous recombination	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000021080's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000021080	RAD54L	65	30.214	ENSCJAG00000002406	CHD1L	53	30.214
ENSCJAG00000021080	RAD54L	63	33.628	ENSCJAG00000015819	HELLS	64	35.377
ENSCJAG00000021080	RAD54L	65	30.619	ENSCJAG00000008862	ERCC6L2	77	30.619
ENSCJAG00000021080	RAD54L	70	53.333	ENSCJAG00000000080	-	79	46.599
ENSCJAG00000021080	RAD54L	63	30.018	ENSCJAG00000006778	SMARCAD1	50	30.018

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000021080	RAD54L	94	97.695	ENSG00000085999	RAD54L	100	98.667	Homo_sapiens
ENSCJAG00000021080	RAD54L	95	75.000	ENSAPOG00000011643	rad54l	99	75.000	Acanthochromis_polyacanthus
ENSCJAG00000021080	RAD54L	94	94.831	ENSAMEG00000013902	RAD54L	99	91.700	Ailuropoda_melanoleuca
ENSCJAG00000021080	RAD54L	94	77.540	ENSACIG00000001939	rad54l	99	75.871	Amphilophus_citrinellus
ENSCJAG00000021080	RAD54L	95	78.238	ENSAOCG00000017576	rad54l	99	78.238	Amphiprion_ocellaris
ENSCJAG00000021080	RAD54L	89	82.443	ENSAPEG00000020658	rad54l	97	79.437	Amphiprion_percula
ENSCJAG00000021080	RAD54L	89	83.109	ENSATEG00000006767	rad54l	99	80.595	Anabas_testudineus
ENSCJAG00000021080	RAD54L	86	87.130	ENSAPLG00000006389	RAD54L	96	87.130	Anas_platyrhynchos
ENSCJAG00000021080	RAD54L	91	85.576	ENSACAG00000002312	RAD54L	97	85.576	Anolis_carolinensis
ENSCJAG00000021080	RAD54L	94	98.050	ENSANAG00000035439	RAD54L	99	95.321	Aotus_nancymaae
ENSCJAG00000021080	RAD54L	91	77.191	ENSACLG00000018711	rad54l	97	77.191	Astatotilapia_calliptera
ENSCJAG00000021080	RAD54L	95	77.704	ENSAMXG00000012777	rad54l	99	77.971	Astyanax_mexicanus
ENSCJAG00000021080	RAD54L	94	94.159	ENSBTAG00000019901	RAD54L	99	91.455	Bos_taurus
ENSCJAG00000021080	RAD54L	82	59.196	WBGene00004298	rad-54	78	59.196	Caenorhabditis_elegans
ENSCJAG00000021080	RAD54L	94	94.128	ENSCAFG00000004272	RAD54L	99	91.444	Canis_familiaris
ENSCJAG00000021080	RAD54L	94	94.118	ENSCAFG00020015066	RAD54L	99	91.432	Canis_lupus_dingo
ENSCJAG00000021080	RAD54L	94	93.617	ENSCHIG00000020118	RAD54L	99	91.043	Capra_hircus
ENSCJAG00000021080	RAD54L	94	93.451	ENSTSYG00000002032	RAD54L	99	91.455	Carlito_syrichta
ENSCJAG00000021080	RAD54L	94	95.035	ENSCPOG00000006768	RAD54L	99	92.246	Cavia_porcellus
ENSCJAG00000021080	RAD54L	94	98.404	ENSCCAG00000025783	RAD54L	99	95.856	Cebus_capucinus
ENSCJAG00000021080	RAD54L	94	97.695	ENSCATG00000030589	RAD54L	99	95.321	Cercocebus_atys
ENSCJAG00000021080	RAD54L	94	94.681	ENSCLAG00000004645	RAD54L	99	92.380	Chinchilla_lanigera
ENSCJAG00000021080	RAD54L	94	97.695	ENSCSAG00000001229	RAD54L	99	95.187	Chlorocebus_sabaeus
ENSCJAG00000021080	RAD54L	92	86.740	ENSCPBG00000005675	RAD54L	97	86.740	Chrysemys_picta_bellii
ENSCJAG00000021080	RAD54L	91	62.617	ENSCING00000024456	-	96	62.533	Ciona_intestinalis
ENSCJAG00000021080	RAD54L	91	63.428	ENSCSAVG00000010859	-	96	63.342	Ciona_savignyi
ENSCJAG00000021080	RAD54L	94	97.872	ENSCANG00000034891	RAD54L	99	95.455	Colobus_angolensis_palliatus
ENSCJAG00000021080	RAD54L	94	93.085	ENSCGRG00001014807	Rad54l	99	91.176	Cricetulus_griseus_chok1gshd
ENSCJAG00000021080	RAD54L	94	93.085	ENSCGRG00000016038	Rad54l	99	91.176	Cricetulus_griseus_crigri
ENSCJAG00000021080	RAD54L	91	78.442	ENSCSEG00000001983	rad54l	97	78.442	Cynoglossus_semilaevis
ENSCJAG00000021080	RAD54L	82	76.471	ENSCVAG00000019561	rad54l	99	79.257	Cyprinodon_variegatus
ENSCJAG00000021080	RAD54L	95	77.139	ENSDARG00000018623	rad54l	99	77.139	Danio_rerio
ENSCJAG00000021080	RAD54L	94	92.553	ENSDNOG00000003395	RAD54L	99	90.241	Dasypus_novemcinctus
ENSCJAG00000021080	RAD54L	95	80.902	ENSDORG00000002632	Rad54l	99	81.028	Dipodomys_ordii
ENSCJAG00000021080	RAD54L	91	55.830	FBgn0002989	okr	92	55.830	Drosophila_melanogaster
ENSCJAG00000021080	RAD54L	76	93.886	ENSETEG00000000550	RAD54L	77	93.886	Echinops_telfairi
ENSCJAG00000021080	RAD54L	94	94.296	ENSEASG00005004511	RAD54L	99	91.700	Equus_asinus_asinus
ENSCJAG00000021080	RAD54L	97	95.013	ENSECAG00000008760	RAD54L	99	95.013	Equus_caballus
ENSCJAG00000021080	RAD54L	94	88.078	ENSEEUG00000008113	RAD54L	99	86.497	Erinaceus_europaeus
ENSCJAG00000021080	RAD54L	95	78.800	ENSELUG00000002295	rad54l	99	78.800	Esox_lucius
ENSCJAG00000021080	RAD54L	94	93.594	ENSFCAG00000003444	RAD54L	99	90.909	Felis_catus
ENSCJAG00000021080	RAD54L	91	84.882	ENSFALG00000009480	RAD54L	97	84.743	Ficedula_albicollis
ENSCJAG00000021080	RAD54L	94	94.681	ENSFDAG00000007806	RAD54L	99	92.513	Fukomys_damarensis
ENSCJAG00000021080	RAD54L	63	77.363	ENSFHEG00000009824	rad54l	78	77.363	Fundulus_heteroclitus
ENSCJAG00000021080	RAD54L	91	78.611	ENSGMOG00000014568	rad54l	97	78.611	Gadus_morhua
ENSCJAG00000021080	RAD54L	91	85.396	ENSGALG00000010356	RAD54L	89	85.396	Gallus_gallus
ENSCJAG00000021080	RAD54L	85	80.357	ENSGAFG00000011110	rad54l	100	78.877	Gambusia_affinis
ENSCJAG00000021080	RAD54L	91	79.889	ENSGACG00000003111	rad54l	94	79.889	Gasterosteus_aculeatus
ENSCJAG00000021080	RAD54L	92	86.584	ENSGAGG00000014089	RAD54L	93	86.584	Gopherus_agassizii
ENSCJAG00000021080	RAD54L	94	97.872	ENSGGOG00000010602	RAD54L	99	95.053	Gorilla_gorilla
ENSCJAG00000021080	RAD54L	91	77.469	ENSHBUG00000007793	rad54l	97	77.469	Haplochromis_burtoni
ENSCJAG00000021080	RAD54L	94	95.213	ENSHGLG00000000753	RAD54L	99	92.513	Heterocephalus_glaber_female
ENSCJAG00000021080	RAD54L	94	95.390	ENSHGLG00100016987	RAD54L	99	92.647	Heterocephalus_glaber_male
ENSCJAG00000021080	RAD54L	91	79.277	ENSIPUG00000015999	rad54l	97	81.872	Ictalurus_punctatus
ENSCJAG00000021080	RAD54L	94	93.794	ENSSTOG00000029125	RAD54L	99	91.578	Ictidomys_tridecemlineatus
ENSCJAG00000021080	RAD54L	94	83.647	ENSJJAG00000000235	-	99	83.502	Jaculus_jaculus
ENSCJAG00000021080	RAD54L	91	79.306	ENSKMAG00000009944	rad54l	97	79.306	Kryptolebias_marmoratus
ENSCJAG00000021080	RAD54L	94	81.172	ENSLBEG00000014617	rad54l	99	80.552	Labrus_bergylta
ENSCJAG00000021080	RAD54L	91	81.704	ENSLOCG00000004144	rad54l	100	82.912	Lepisosteus_oculatus
ENSCJAG00000021080	RAD54L	91	94.854	ENSLAFG00000007583	RAD54L	99	92.102	Loxodonta_africana
ENSCJAG00000021080	RAD54L	94	97.695	ENSMFAG00000031241	RAD54L	99	95.321	Macaca_fascicularis
ENSCJAG00000021080	RAD54L	94	97.695	ENSMMUG00000011568	RAD54L	99	95.321	Macaca_mulatta
ENSCJAG00000021080	RAD54L	94	97.872	ENSMNEG00000038562	RAD54L	99	95.321	Macaca_nemestrina
ENSCJAG00000021080	RAD54L	94	97.872	ENSMLEG00000038145	RAD54L	99	95.455	Mandrillus_leucophaeus
ENSCJAG00000021080	RAD54L	95	79.218	ENSMAMG00000022180	rad54l	99	80.292	Mastacembelus_armatus
ENSCJAG00000021080	RAD54L	91	77.191	ENSMZEG00005018081	rad54l	97	77.191	Maylandia_zebra
ENSCJAG00000021080	RAD54L	91	85.097	ENSMGAG00000010634	RAD54L	97	85.097	Meleagris_gallopavo
ENSCJAG00000021080	RAD54L	95	90.909	ENSMAUG00000020076	Rad54l	99	90.909	Mesocricetus_auratus
ENSCJAG00000021080	RAD54L	94	95.567	ENSMICG00000003266	RAD54L	99	93.449	Microcebus_murinus
ENSCJAG00000021080	RAD54L	94	92.908	ENSMOCG00000001778	Rad54l	99	91.043	Microtus_ochrogaster
ENSCJAG00000021080	RAD54L	91	76.602	ENSMALG00000021148	rad54l	97	76.283	Monopterus_albus
ENSCJAG00000021080	RAD54L	95	86.866	MGP_CAROLIEiJ_G0026325	Rad54l	99	86.866	Mus_caroli
ENSCJAG00000021080	RAD54L	94	93.440	ENSMUSG00000028702	Rad54l	99	91.310	Mus_musculus
ENSCJAG00000021080	RAD54L	94	92.908	MGP_PahariEiJ_G0028657	Rad54l	99	91.176	Mus_pahari
ENSCJAG00000021080	RAD54L	94	93.617	MGP_SPRETEiJ_G0027297	Rad54l	99	91.444	Mus_spretus
ENSCJAG00000021080	RAD54L	94	93.617	ENSMPUG00000012883	RAD54L	99	91.176	Mustela_putorius_furo
ENSCJAG00000021080	RAD54L	94	95.204	ENSMLUG00000003763	RAD54L	99	92.637	Myotis_lucifugus
ENSCJAG00000021080	RAD54L	94	92.540	ENSNGAG00000024213	Rad54l	99	90.495	Nannospalax_galili
ENSCJAG00000021080	RAD54L	94	96.986	ENSNLEG00000016548	RAD54L	99	94.385	Nomascus_leucogenys
ENSCJAG00000021080	RAD54L	83	84.923	ENSMEUG00000006793	RAD54L	96	84.923	Notamacropus_eugenii
ENSCJAG00000021080	RAD54L	86	92.031	ENSOPRG00000016016	RAD54L	90	92.031	Ochotona_princeps
ENSCJAG00000021080	RAD54L	94	95.567	ENSODEG00000008519	RAD54L	99	93.182	Octodon_degus
ENSCJAG00000021080	RAD54L	91	77.469	ENSONIG00000007659	rad54l	97	77.147	Oreochromis_niloticus
ENSCJAG00000021080	RAD54L	94	93.794	ENSOCUG00000005229	RAD54L	99	91.578	Oryctolagus_cuniculus
ENSCJAG00000021080	RAD54L	95	76.573	ENSORLG00000002958	rad54l	99	76.573	Oryzias_latipes
ENSCJAG00000021080	RAD54L	95	76.707	ENSORLG00020006554	rad54l	99	79.416	Oryzias_latipes_hni
ENSCJAG00000021080	RAD54L	95	76.471	ENSORLG00015002907	rad54l	99	76.471	Oryzias_latipes_hsok
ENSCJAG00000021080	RAD54L	95	76.975	ENSOMEG00000007770	rad54l	99	76.975	Oryzias_melastigma
ENSCJAG00000021080	RAD54L	94	93.640	ENSOARG00000002264	RAD54L	99	91.067	Ovis_aries
ENSCJAG00000021080	RAD54L	94	98.050	ENSPPAG00000031222	RAD54L	99	95.187	Pan_paniscus
ENSCJAG00000021080	RAD54L	94	93.594	ENSPPRG00000010317	RAD54L	99	90.909	Panthera_pardus
ENSCJAG00000021080	RAD54L	94	93.594	ENSPTIG00000012200	RAD54L	99	90.909	Panthera_tigris_altaica
ENSCJAG00000021080	RAD54L	94	97.695	ENSPTRG00000000689	RAD54L	99	95.053	Pan_troglodytes
ENSCJAG00000021080	RAD54L	94	97.872	ENSPANG00000016295	RAD54L	99	95.455	Papio_anubis
ENSCJAG00000021080	RAD54L	91	77.051	ENSPKIG00000016172	rad54l	97	77.051	Paramormyrops_kingsleyae
ENSCJAG00000021080	RAD54L	90	86.517	ENSPSIG00000003258	RAD54L	97	86.517	Pelodiscus_sinensis
ENSCJAG00000021080	RAD54L	95	73.236	ENSPMGG00000016335	rad54l	99	73.236	Periophthalmus_magnuspinnatus
ENSCJAG00000021080	RAD54L	94	93.262	ENSPEMG00000011422	Rad54l	99	91.176	Peromyscus_maniculatus_bairdii
ENSCJAG00000021080	RAD54L	91	70.994	ENSPMAG00000007719	rad54l	97	70.994	Petromyzon_marinus
ENSCJAG00000021080	RAD54L	91	87.778	ENSPCIG00000029032	RAD54L	97	87.778	Phascolarctos_cinereus
ENSCJAG00000021080	RAD54L	81	81.604	ENSPFOG00000013732	rad54l	100	81.604	Poecilia_formosa
ENSCJAG00000021080	RAD54L	77	80.357	ENSPLAG00000023416	rad54l	99	80.357	Poecilia_latipinna
ENSCJAG00000021080	RAD54L	85	80.357	ENSPMEG00000008299	rad54l	100	79.173	Poecilia_mexicana
ENSCJAG00000021080	RAD54L	94	77.184	ENSPREG00000019955	rad54l	99	75.770	Poecilia_reticulata
ENSCJAG00000021080	RAD54L	94	93.750	ENSPPYG00000001398	RAD54L	99	93.750	Pongo_abelii
ENSCJAG00000021080	RAD54L	73	92.350	ENSPCAG00000005323	RAD54L	77	92.350	Procavia_capensis
ENSCJAG00000021080	RAD54L	94	95.745	ENSPCOG00000015423	RAD54L	99	93.449	Propithecus_coquereli
ENSCJAG00000021080	RAD54L	91	74.003	ENSPNYG00000002942	rad54l	95	74.003	Pundamilia_nyererei
ENSCJAG00000021080	RAD54L	95	78.075	ENSPNAG00000012483	rad54l	99	78.075	Pygocentrus_nattereri
ENSCJAG00000021080	RAD54L	95	90.775	ENSRNOG00000013148	Rad54l	99	90.775	Rattus_norvegicus
ENSCJAG00000021080	RAD54L	94	97.872	ENSRBIG00000043495	RAD54L	99	95.455	Rhinopithecus_bieti
ENSCJAG00000021080	RAD54L	94	98.050	ENSRROG00000020844	RAD54L	99	95.588	Rhinopithecus_roxellana
ENSCJAG00000021080	RAD54L	73	49.676	YGL163C	RAD54	68	50.162	Saccharomyces_cerevisiae
ENSCJAG00000021080	RAD54L	94	98.582	ENSSBOG00000024672	RAD54L	99	95.989	Saimiri_boliviensis_boliviensis
ENSCJAG00000021080	RAD54L	94	86.749	ENSSHAG00000000110	RAD54L	97	87.396	Sarcophilus_harrisii
ENSCJAG00000021080	RAD54L	91	81.206	ENSSDUG00000019147	rad54l	97	80.663	Seriola_dumerili
ENSCJAG00000021080	RAD54L	91	80.860	ENSSLDG00000012330	rad54l	97	80.860	Seriola_lalandi_dorsalis
ENSCJAG00000021080	RAD54L	79	88.443	ENSSARG00000006689	RAD54L	100	88.443	Sorex_araneus
ENSCJAG00000021080	RAD54L	95	77.036	ENSSPAG00000011016	rad54l	99	77.036	Stegastes_partitus
ENSCJAG00000021080	RAD54L	94	94.504	ENSSSCG00000003905	RAD54L	99	91.845	Sus_scrofa
ENSCJAG00000021080	RAD54L	91	84.605	ENSTGUG00000008233	RAD54L	97	84.743	Taeniopygia_guttata
ENSCJAG00000021080	RAD54L	91	77.051	ENSTRUG00000008410	rad54l	96	77.051	Takifugu_rubripes
ENSCJAG00000021080	RAD54L	91	76.741	ENSTNIG00000004716	rad54l	97	76.741	Tetraodon_nigroviridis
ENSCJAG00000021080	RAD54L	95	83.422	ENSTTRG00000006315	RAD54L	99	83.422	Tursiops_truncatus
ENSCJAG00000021080	RAD54L	94	94.434	ENSUAMG00000011824	RAD54L	99	91.117	Ursus_americanus
ENSCJAG00000021080	RAD54L	94	94.614	ENSUMAG00000023603	RAD54L	99	90.040	Ursus_maritimus
ENSCJAG00000021080	RAD54L	94	94.306	ENSVVUG00000007201	RAD54L	99	91.444	Vulpes_vulpes
ENSCJAG00000021080	RAD54L	91	75.728	ENSXETG00000004369	rad54l	99	75.728	Xenopus_tropicalis
ENSCJAG00000021080	RAD54L	57	75.182	ENSXCOG00000016028	rad54l	81	79.133	Xiphophorus_couchianus