EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000021330 (Gene tree)
Gene ID: 100397233
Gene Symbol: SNRNP48
Alias: C6orf151|FLJ32234|dJ336K20B.1|dJ512B11.2
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 19761 bases
Position: chrNTIC01022223.1:148953251-148973011
Accession: 100397233
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000064954	zf-U11-48K	PF05253.12	1.1e-09	1	1
ENSCJAP00000039705	zf-U11-48K	PF05253.12	1.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000041948	SNRNP48-201	1020	-	ENSCJAP00000039705	339 (aa)	XP_002746290	U3CPU1
ENSCJAT00000084348	SNRNP48-202	993	-	ENSCJAP00000064954	330 (aa)	-	A0A2R8NCJ3

Gene Model

Click here to download ENSCJAG00000021330's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000021330's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000021330	SNRNP48	100	97.640	ENSG00000168566	SNRNP48	100	97.640	Homo_sapiens
ENSCJAG00000021330	SNRNP48	81	47.703	ENSAPOG00000021430	snrnp48	83	47.405	Acanthochromis_polyacanthus
ENSCJAG00000021330	SNRNP48	99	89.049	ENSAMEG00000017349	SNRNP48	100	87.896	Ailuropoda_melanoleuca
ENSCJAG00000021330	SNRNP48	83	46.290	ENSACIG00000002032	snrnp48	82	46.975	Amphilophus_citrinellus
ENSCJAG00000021330	SNRNP48	81	47.703	ENSAOCG00000010562	snrnp48	96	42.651	Amphiprion_ocellaris
ENSCJAG00000021330	SNRNP48	81	48.043	ENSAPEG00000003231	snrnp48	96	42.899	Amphiprion_percula
ENSCJAG00000021330	SNRNP48	77	50.368	ENSATEG00000020210	snrnp48	81	50.000	Anabas_testudineus
ENSCJAG00000021330	SNRNP48	83	65.411	ENSACAG00000002811	SNRNP48	89	65.517	Anolis_carolinensis
ENSCJAG00000021330	SNRNP48	100	98.230	ENSANAG00000033538	SNRNP48	100	98.230	Aotus_nancymaae
ENSCJAG00000021330	SNRNP48	94	45.679	ENSAMXG00000015309	snrnp48	85	47.735	Astyanax_mexicanus
ENSCJAG00000021330	SNRNP48	100	86.176	ENSBTAG00000001123	SNRNP48	100	86.471	Bos_taurus
ENSCJAG00000021330	SNRNP48	99	91.369	ENSCAFG00000009574	SNRNP48	83	91.395	Canis_familiaris
ENSCJAG00000021330	SNRNP48	99	91.691	ENSCAFG00020013203	SNRNP48	99	91.691	Canis_lupus_dingo
ENSCJAG00000021330	SNRNP48	100	87.647	ENSCHIG00000015216	SNRNP48	100	87.941	Capra_hircus
ENSCJAG00000021330	SNRNP48	100	92.920	ENSTSYG00000000698	SNRNP48	100	92.920	Carlito_syrichta
ENSCJAG00000021330	SNRNP48	91	87.338	ENSCAPG00000006768	SNRNP48	100	87.013	Cavia_aperea
ENSCJAG00000021330	SNRNP48	100	90.265	ENSCPOG00000007910	SNRNP48	100	90.265	Cavia_porcellus
ENSCJAG00000021330	SNRNP48	100	97.640	ENSCCAG00000035652	SNRNP48	100	97.640	Cebus_capucinus
ENSCJAG00000021330	SNRNP48	100	97.050	ENSCATG00000033947	SNRNP48	100	97.050	Cercocebus_atys
ENSCJAG00000021330	SNRNP48	100	90.560	ENSCLAG00000003765	SNRNP48	100	90.560	Chinchilla_lanigera
ENSCJAG00000021330	SNRNP48	100	97.640	ENSCSAG00000007409	SNRNP48	100	97.640	Chlorocebus_sabaeus
ENSCJAG00000021330	SNRNP48	85	63.816	ENSCPBG00000019146	SNRNP48	90	64.646	Chrysemys_picta_bellii
ENSCJAG00000021330	SNRNP48	94	30.247	ENSCING00000004121	-	61	35.294	Ciona_intestinalis
ENSCJAG00000021330	SNRNP48	100	97.640	ENSCANG00000030017	SNRNP48	100	97.640	Colobus_angolensis_palliatus
ENSCJAG00000021330	SNRNP48	100	88.496	ENSCGRG00001001076	-	100	87.611	Cricetulus_griseus_chok1gshd
ENSCJAG00000021330	SNRNP48	99	69.552	ENSCGRG00001008805	-	95	67.761	Cricetulus_griseus_chok1gshd
ENSCJAG00000021330	SNRNP48	100	88.496	ENSCGRG00000007781	Snrnp48	100	87.611	Cricetulus_griseus_crigri
ENSCJAG00000021330	SNRNP48	76	49.421	ENSCSEG00000000722	snrnp48	71	49.421	Cynoglossus_semilaevis
ENSCJAG00000021330	SNRNP48	88	46.580	ENSCVAG00000019829	snrnp48	73	47.222	Cyprinodon_variegatus
ENSCJAG00000021330	SNRNP48	82	46.690	ENSDARG00000039989	snrnp48	83	45.548	Danio_rerio
ENSCJAG00000021330	SNRNP48	100	90.294	ENSDNOG00000014978	SNRNP48	100	90.294	Dasypus_novemcinctus
ENSCJAG00000021330	SNRNP48	99	88.791	ENSDORG00000015140	Snrnp48	100	88.000	Dipodomys_ordii
ENSCJAG00000021330	SNRNP48	99	92.308	ENSEASG00005012021	SNRNP48	99	92.308	Equus_asinus_asinus
ENSCJAG00000021330	SNRNP48	100	92.920	ENSECAG00000026937	SNRNP48	100	92.920	Equus_caballus
ENSCJAG00000021330	SNRNP48	100	70.294	ENSEEUG00000015437	SNRNP48	99	70.000	Erinaceus_europaeus
ENSCJAG00000021330	SNRNP48	88	46.732	ENSELUG00000009766	snrnp48	78	47.183	Esox_lucius
ENSCJAG00000021330	SNRNP48	100	93.510	ENSFCAG00000018853	SNRNP48	100	93.510	Felis_catus
ENSCJAG00000021330	SNRNP48	83	66.781	ENSFALG00000007797	SNRNP48	92	66.323	Ficedula_albicollis
ENSCJAG00000021330	SNRNP48	99	89.941	ENSFDAG00000009231	SNRNP48	100	89.676	Fukomys_damarensis
ENSCJAG00000021330	SNRNP48	59	56.931	ENSFHEG00000014647	snrnp48	97	46.465	Fundulus_heteroclitus
ENSCJAG00000021330	SNRNP48	73	48.193	ENSGMOG00000018599	-	86	46.127	Gadus_morhua
ENSCJAG00000021330	SNRNP48	78	67.509	ENSGALG00000013005	SNRNP48	82	68.980	Gallus_gallus
ENSCJAG00000021330	SNRNP48	82	48.592	ENSGAFG00000021639	snrnp48	81	44.109	Gambusia_affinis
ENSCJAG00000021330	SNRNP48	71	52.066	ENSGACG00000017756	-	84	48.780	Gasterosteus_aculeatus
ENSCJAG00000021330	SNRNP48	84	62.914	ENSGAGG00000000865	SNRNP48	96	63.636	Gopherus_agassizii
ENSCJAG00000021330	SNRNP48	100	97.640	ENSGGOG00000013220	SNRNP48	100	97.640	Gorilla_gorilla
ENSCJAG00000021330	SNRNP48	97	43.373	ENSHBUG00000017066	snrnp48	95	40.571	Haplochromis_burtoni
ENSCJAG00000021330	SNRNP48	99	91.124	ENSHGLG00000015241	SNRNP48	100	90.855	Heterocephalus_glaber_female
ENSCJAG00000021330	SNRNP48	99	91.124	ENSHGLG00100010027	SNRNP48	100	90.855	Heterocephalus_glaber_male
ENSCJAG00000021330	SNRNP48	72	47.967	ENSHCOG00000014066	snrnp48	81	45.833	Hippocampus_comes
ENSCJAG00000021330	SNRNP48	100	93.805	ENSSTOG00000014635	SNRNP48	100	97.000	Ictidomys_tridecemlineatus
ENSCJAG00000021330	SNRNP48	100	85.251	ENSJJAG00000011495	Snrnp48	100	85.251	Jaculus_jaculus
ENSCJAG00000021330	SNRNP48	92	44.089	ENSKMAG00000016514	snrnp48	80	46.975	Kryptolebias_marmoratus
ENSCJAG00000021330	SNRNP48	76	49.231	ENSLBEG00000026249	snrnp48	95	42.899	Labrus_bergylta
ENSCJAG00000021330	SNRNP48	96	53.892	ENSLACG00000003958	SNRNP48	98	52.478	Latimeria_chalumnae
ENSCJAG00000021330	SNRNP48	83	50.865	ENSLOCG00000004187	snrnp48	95	48.225	Lepisosteus_oculatus
ENSCJAG00000021330	SNRNP48	100	88.496	ENSLAFG00000011152	SNRNP48	100	88.496	Loxodonta_africana
ENSCJAG00000021330	SNRNP48	100	97.935	ENSMFAG00000045216	SNRNP48	100	97.935	Macaca_fascicularis
ENSCJAG00000021330	SNRNP48	100	97.935	ENSMMUG00000014785	SNRNP48	100	97.935	Macaca_mulatta
ENSCJAG00000021330	SNRNP48	100	97.935	ENSMNEG00000042269	SNRNP48	100	97.935	Macaca_nemestrina
ENSCJAG00000021330	SNRNP48	100	97.935	ENSMLEG00000034004	SNRNP48	100	97.935	Mandrillus_leucophaeus
ENSCJAG00000021330	SNRNP48	76	47.727	ENSMAMG00000018673	snrnp48	72	47.518	Mastacembelus_armatus
ENSCJAG00000021330	SNRNP48	83	66.327	ENSMGAG00000006037	SNRNP48	99	66.096	Meleagris_gallopavo
ENSCJAG00000021330	SNRNP48	100	89.086	ENSMAUG00000011944	Snrnp48	100	88.201	Mesocricetus_auratus
ENSCJAG00000021330	SNRNP48	100	91.445	ENSMICG00000012497	SNRNP48	100	91.445	Microcebus_murinus
ENSCJAG00000021330	SNRNP48	100	88.791	ENSMOCG00000015555	Snrnp48	100	87.906	Microtus_ochrogaster
ENSCJAG00000021330	SNRNP48	54	53.514	ENSMMOG00000003072	-	58	53.514	Mola_mola
ENSCJAG00000021330	SNRNP48	98	70.349	ENSMODG00000009996	SNRNP48	93	70.349	Monodelphis_domestica
ENSCJAG00000021330	SNRNP48	75	50.196	ENSMALG00000005725	snrnp48	81	47.163	Monopterus_albus
ENSCJAG00000021330	SNRNP48	100	87.906	MGP_CAROLIEiJ_G0018441	Snrnp48	100	87.021	Mus_caroli
ENSCJAG00000021330	SNRNP48	100	87.021	ENSMUSG00000021431	Snrnp48	100	86.136	Mus_musculus
ENSCJAG00000021330	SNRNP48	100	87.316	MGP_PahariEiJ_G0019509	Snrnp48	100	86.431	Mus_pahari
ENSCJAG00000021330	SNRNP48	100	86.431	MGP_SPRETEiJ_G0019321	Snrnp48	100	85.546	Mus_spretus
ENSCJAG00000021330	SNRNP48	99	87.870	ENSNGAG00000004849	Snrnp48	99	87.870	Nannospalax_galili
ENSCJAG00000021330	SNRNP48	75	47.843	ENSNBRG00000012127	snrnp48	82	45.833	Neolamprologus_brichardi
ENSCJAG00000021330	SNRNP48	100	97.935	ENSNLEG00000011667	SNRNP48	100	97.935	Nomascus_leucogenys
ENSCJAG00000021330	SNRNP48	95	78.328	ENSOPRG00000015471	SNRNP48	100	78.328	Ochotona_princeps
ENSCJAG00000021330	SNRNP48	76	47.876	ENSONIG00000001520	snrnp48	82	45.833	Oreochromis_niloticus
ENSCJAG00000021330	SNRNP48	57	63.462	ENSOANG00000019888	-	100	64.423	Ornithorhynchus_anatinus
ENSCJAG00000021330	SNRNP48	84	90.909	ENSOCUG00000005168	SNRNP48	100	90.132	Oryctolagus_cuniculus
ENSCJAG00000021330	SNRNP48	88	47.078	ENSORLG00000015654	snrnp48	82	47.586	Oryzias_latipes
ENSCJAG00000021330	SNRNP48	88	46.104	ENSORLG00020015976	snrnp48	70	46.897	Oryzias_latipes_hni
ENSCJAG00000021330	SNRNP48	88	47.078	ENSORLG00015022379	snrnp48	71	47.931	Oryzias_latipes_hsok
ENSCJAG00000021330	SNRNP48	83	47.569	ENSOMEG00000022007	snrnp48	82	48.264	Oryzias_melastigma
ENSCJAG00000021330	SNRNP48	92	91.346	ENSOGAG00000005275	SNRNP48	96	91.509	Otolemur_garnettii
ENSCJAG00000021330	SNRNP48	85	87.805	ENSOARG00000017319	SNRNP48	99	87.986	Ovis_aries
ENSCJAG00000021330	SNRNP48	100	97.935	ENSPPAG00000032873	SNRNP48	100	97.935	Pan_paniscus
ENSCJAG00000021330	SNRNP48	100	93.805	ENSPPRG00000004283	SNRNP48	100	93.805	Panthera_pardus
ENSCJAG00000021330	SNRNP48	85	94.425	ENSPTIG00000013502	SNRNP48	99	94.700	Panthera_tigris_altaica
ENSCJAG00000021330	SNRNP48	100	97.935	ENSPTRG00000017703	SNRNP48	100	97.935	Pan_troglodytes
ENSCJAG00000021330	SNRNP48	100	97.935	ENSPANG00000000771	SNRNP48	100	97.935	Papio_anubis
ENSCJAG00000021330	SNRNP48	94	46.087	ENSPKIG00000013703	snrnp48	59	49.474	Paramormyrops_kingsleyae
ENSCJAG00000021330	SNRNP48	87	61.935	ENSPSIG00000002213	SNRNP48	92	62.799	Pelodiscus_sinensis
ENSCJAG00000021330	SNRNP48	75	48.996	ENSPMGG00000008120	snrnp48	90	48.996	Periophthalmus_magnuspinnatus
ENSCJAG00000021330	SNRNP48	100	88.791	ENSPEMG00000008872	Snrnp48	100	87.906	Peromyscus_maniculatus_bairdii
ENSCJAG00000021330	SNRNP48	95	45.122	ENSPFOG00000003578	snrnp48	93	45.266	Poecilia_formosa
ENSCJAG00000021330	SNRNP48	67	52.402	ENSPLAG00000002290	snrnp48	77	51.965	Poecilia_latipinna
ENSCJAG00000021330	SNRNP48	95	44.512	ENSPMEG00000018033	snrnp48	93	44.675	Poecilia_mexicana
ENSCJAG00000021330	SNRNP48	72	52.439	ENSPREG00000018541	snrnp48	80	49.291	Poecilia_reticulata
ENSCJAG00000021330	SNRNP48	100	96.460	ENSPPYG00000016209	SNRNP48	100	96.460	Pongo_abelii
ENSCJAG00000021330	SNRNP48	79	70.037	ENSPCAG00000011991	SNRNP48	99	70.037	Procavia_capensis
ENSCJAG00000021330	SNRNP48	100	90.855	ENSPVAG00000002854	SNRNP48	100	90.855	Pteropus_vampyrus
ENSCJAG00000021330	SNRNP48	75	48.627	ENSPNYG00000015399	snrnp48	90	46.528	Pundamilia_nyererei
ENSCJAG00000021330	SNRNP48	100	87.906	ENSRNOG00000013756	Snrnp48	100	87.021	Rattus_norvegicus
ENSCJAG00000021330	SNRNP48	91	97.419	ENSRBIG00000043856	SNRNP48	98	97.419	Rhinopithecus_bieti
ENSCJAG00000021330	SNRNP48	100	97.640	ENSRROG00000043229	SNRNP48	100	97.640	Rhinopithecus_roxellana
ENSCJAG00000021330	SNRNP48	100	98.820	ENSSBOG00000019486	SNRNP48	100	98.820	Saimiri_boliviensis_boliviensis
ENSCJAG00000021330	SNRNP48	99	71.060	ENSSHAG00000014483	SNRNP48	100	71.060	Sarcophilus_harrisii
ENSCJAG00000021330	SNRNP48	75	50.187	ENSSFOG00015006610	snrnp48	72	48.387	Scleropages_formosus
ENSCJAG00000021330	SNRNP48	88	46.844	ENSSDUG00000014953	snrnp48	96	42.857	Seriola_dumerili
ENSCJAG00000021330	SNRNP48	83	48.475	ENSSLDG00000005989	snrnp48	97	42.655	Seriola_lalandi_dorsalis
ENSCJAG00000021330	SNRNP48	84	64.094	ENSSPUG00000006257	SNRNP48	84	64.505	Sphenodon_punctatus
ENSCJAG00000021330	SNRNP48	78	48.905	ENSSPAG00000006454	snrnp48	80	48.214	Stegastes_partitus
ENSCJAG00000021330	SNRNP48	83	64.948	ENSTGUG00000007575	SNRNP48	92	64.931	Taeniopygia_guttata
ENSCJAG00000021330	SNRNP48	74	49.603	ENSTRUG00000007031	snrnp48	82	48.410	Takifugu_rubripes
ENSCJAG00000021330	SNRNP48	75	46.667	ENSTNIG00000012977	-	76	46.484	Tetraodon_nigroviridis
ENSCJAG00000021330	SNRNP48	100	74.336	ENSTBEG00000015620	SNRNP48	100	74.336	Tupaia_belangeri
ENSCJAG00000021330	SNRNP48	100	90.560	ENSTTRG00000016715	SNRNP48	100	90.560	Tursiops_truncatus
ENSCJAG00000021330	SNRNP48	100	92.035	ENSUAMG00000003690	SNRNP48	100	90.855	Ursus_americanus
ENSCJAG00000021330	SNRNP48	85	87.456	ENSVPAG00000003557	SNRNP48	99	87.279	Vicugna_pacos
ENSCJAG00000021330	SNRNP48	99	91.395	ENSVVUG00000004996	SNRNP48	99	91.395	Vulpes_vulpes
ENSCJAG00000021330	SNRNP48	89	51.911	ENSXETG00000020447	snrnp48	99	48.588	Xenopus_tropicalis
ENSCJAG00000021330	SNRNP48	67	51.739	ENSXCOG00000004478	snrnp48	69	51.489	Xiphophorus_couchianus
ENSCJAG00000021330	SNRNP48	82	50.179	ENSXMAG00000013595	snrnp48	81	45.317	Xiphophorus_maculatus