EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000021373 (Gene tree)
Gene ID: 100403652
Gene Symbol: RPP40
Alias: RNASEP1|bA428J1.3
Full Name: ribonuclease P/MRP subunit p40
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 9115 bases
Position: chrNTIC01022223.1:146353455-146362569
Accession: 100403652
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000039774	Ribonuc_P_40	PF08584.11	9.9e-95	1	1
ENSCJAP00000039773	Ribonuc_P_40	PF08584.11	6.1e-78	1	1
ENSCJAP00000062396	Ribonuc_P_40	PF08584.11	6.5e-75	1	2
ENSCJAP00000062396	Ribonuc_P_40	PF08584.11	6.5e-75	2	2
ENSCJAP00000060870	Ribonuc_P_40	PF08584.11	2.3e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000042022	RPP40-201	1092	-	ENSCJAP00000039774	363 (aa)	XP_002746299	F7H9P1
ENSCJAT00000042021	RPP40-202	1023	-	ENSCJAP00000039773	340 (aa)	-	F7H9P3
ENSCJAT00000085518	RPP40-203	966	-	ENSCJAP00000062396	321 (aa)	XP_017826425	A0A2R8MMU6
ENSCJAT00000070138	RPP40-204	1071	-	ENSCJAP00000060870	225 (aa)	-	A0A2R8MJJ9

Gene Model

Click here to download ENSCJAG00000021373's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc03008	Ribosome biogenesis in eukaryotes	KEGG
cjc03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000021373's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000021373	RPP40	100	95.588	ENSG00000124787	RPP40	100	95.588	Homo_sapiens
ENSCJAG00000021373	RPP40	88	32.776	ENSAPOG00000008660	rpp40	92	32.776	Acanthochromis_polyacanthus
ENSCJAG00000021373	RPP40	100	86.226	ENSAMEG00000012938	RPP40	100	86.226	Ailuropoda_melanoleuca
ENSCJAG00000021373	RPP40	98	36.188	ENSACIG00000003617	rpp40	98	36.188	Amphilophus_citrinellus
ENSCJAG00000021373	RPP40	98	37.815	ENSAOCG00000011846	rpp40	99	37.815	Amphiprion_ocellaris
ENSCJAG00000021373	RPP40	98	37.815	ENSAPEG00000001322	rpp40	99	37.815	Amphiprion_percula
ENSCJAG00000021373	RPP40	98	38.162	ENSATEG00000006584	rpp40	99	38.162	Anabas_testudineus
ENSCJAG00000021373	RPP40	83	66.667	ENSAPLG00000005691	RPP40	99	66.667	Anas_platyrhynchos
ENSCJAG00000021373	RPP40	99	61.560	ENSACAG00000006550	RPP40	88	61.560	Anolis_carolinensis
ENSCJAG00000021373	RPP40	100	98.131	ENSANAG00000029246	RPP40	100	98.131	Aotus_nancymaae
ENSCJAG00000021373	RPP40	98	38.028	ENSACLG00000015883	rpp40	96	38.028	Astatotilapia_calliptera
ENSCJAG00000021373	RPP40	98	48.739	ENSAMXG00000001755	rpp40	99	48.739	Astyanax_mexicanus
ENSCJAG00000021373	RPP40	100	81.818	ENSBTAG00000003332	RPP40	100	81.818	Bos_taurus
ENSCJAG00000021373	RPP40	100	85.399	ENSCAFG00000009435	RPP40	100	85.399	Canis_familiaris
ENSCJAG00000021373	RPP40	100	85.399	ENSCAFG00020013380	RPP40	100	85.399	Canis_lupus_dingo
ENSCJAG00000021373	RPP40	100	81.543	ENSCHIG00000016849	RPP40	100	81.543	Capra_hircus
ENSCJAG00000021373	RPP40	100	88.705	ENSTSYG00000032857	RPP40	100	90.099	Carlito_syrichta
ENSCJAG00000021373	RPP40	90	77.676	ENSCAPG00000004957	RPP40	98	77.676	Cavia_aperea
ENSCJAG00000021373	RPP40	100	83.747	ENSCPOG00000005855	RPP40	100	83.747	Cavia_porcellus
ENSCJAG00000021373	RPP40	100	98.824	ENSCCAG00000019809	RPP40	100	98.824	Cebus_capucinus
ENSCJAG00000021373	RPP40	100	94.215	ENSCATG00000038787	RPP40	100	94.215	Cercocebus_atys
ENSCJAG00000021373	RPP40	100	83.196	ENSCLAG00000003235	RPP40	100	83.196	Chinchilla_lanigera
ENSCJAG00000021373	RPP40	100	94.490	ENSCSAG00000007307	RPP40	100	94.490	Chlorocebus_sabaeus
ENSCJAG00000021373	RPP40	73	68.273	ENSCHOG00000005856	-	99	68.273	Choloepus_hoffmanni
ENSCJAG00000021373	RPP40	99	68.889	ENSCPBG00000009003	RPP40	99	68.889	Chrysemys_picta_bellii
ENSCJAG00000021373	RPP40	100	95.041	ENSCANG00000033965	RPP40	100	95.041	Colobus_angolensis_palliatus
ENSCJAG00000021373	RPP40	100	77.961	ENSCGRG00001018328	Rpp40	100	77.961	Cricetulus_griseus_chok1gshd
ENSCJAG00000021373	RPP40	100	77.961	ENSCGRG00000011344	Rpp40	100	77.961	Cricetulus_griseus_crigri
ENSCJAG00000021373	RPP40	98	35.955	ENSCSEG00000015006	-	98	35.955	Cynoglossus_semilaevis
ENSCJAG00000021373	RPP40	74	33.210	ENSCVAG00000012169	rpp40	100	33.210	Cyprinodon_variegatus
ENSCJAG00000021373	RPP40	99	49.304	ENSDARG00000017605	rpp40	99	49.304	Danio_rerio
ENSCJAG00000021373	RPP40	95	82.629	ENSDNOG00000048136	RPP40	99	82.155	Dasypus_novemcinctus
ENSCJAG00000021373	RPP40	100	61.864	ENSDORG00000011196	-	100	61.864	Dipodomys_ordii
ENSCJAG00000021373	RPP40	100	81.818	ENSDORG00000029944	-	100	81.818	Dipodomys_ordii
ENSCJAG00000021373	RPP40	90	80.275	ENSETEG00000007458	RPP40	100	66.116	Echinops_telfairi
ENSCJAG00000021373	RPP40	98	43.380	ENSEBUG00000000386	rpp40	99	43.380	Eptatretus_burgeri
ENSCJAG00000021373	RPP40	100	87.052	ENSEASG00005012116	RPP40	80	87.052	Equus_asinus_asinus
ENSCJAG00000021373	RPP40	100	87.328	ENSECAG00000017247	RPP40	80	87.328	Equus_caballus
ENSCJAG00000021373	RPP40	95	61.972	ENSEEUG00000012087	RPP40	100	64.983	Erinaceus_europaeus
ENSCJAG00000021373	RPP40	98	47.486	ENSELUG00000017004	rpp40	99	47.486	Esox_lucius
ENSCJAG00000021373	RPP40	100	86.501	ENSFCAG00000009249	RPP40	100	86.501	Felis_catus
ENSCJAG00000021373	RPP40	84	70.455	ENSFALG00000013166	RPP40	100	64.220	Ficedula_albicollis
ENSCJAG00000021373	RPP40	100	85.124	ENSFDAG00000013001	-	100	85.124	Fukomys_damarensis
ENSCJAG00000021373	RPP40	80	69.759	ENSFDAG00000000265	-	99	69.759	Fukomys_damarensis
ENSCJAG00000021373	RPP40	98	40.223	ENSFHEG00000021429	rpp40	88	40.223	Fundulus_heteroclitus
ENSCJAG00000021373	RPP40	87	44.643	ENSGMOG00000018653	rpp40	100	44.643	Gadus_morhua
ENSCJAG00000021373	RPP40	99	65.000	ENSGALG00000036074	RPP40	99	65.000	Gallus_gallus
ENSCJAG00000021373	RPP40	82	34.564	ENSGAFG00000004189	-	98	34.564	Gambusia_affinis
ENSCJAG00000021373	RPP40	98	38.095	ENSGACG00000002472	rpp40	99	38.095	Gasterosteus_aculeatus
ENSCJAG00000021373	RPP40	99	69.444	ENSGAGG00000012918	RPP40	99	69.444	Gopherus_agassizii
ENSCJAG00000021373	RPP40	100	95.317	ENSGGOG00000013764	RPP40	100	95.317	Gorilla_gorilla
ENSCJAG00000021373	RPP40	90	37.309	ENSHBUG00000009378	rpp40	93	37.309	Haplochromis_burtoni
ENSCJAG00000021373	RPP40	100	85.124	ENSHGLG00000004871	RPP40	100	85.124	Heterocephalus_glaber_female
ENSCJAG00000021373	RPP40	100	85.124	ENSHGLG00100002080	RPP40	100	85.124	Heterocephalus_glaber_male
ENSCJAG00000021373	RPP40	96	31.897	ENSHCOG00000013264	-	93	31.897	Hippocampus_comes
ENSCJAG00000021373	RPP40	99	46.667	ENSIPUG00000008951	RPP40	99	46.667	Ictalurus_punctatus
ENSCJAG00000021373	RPP40	100	84.022	ENSSTOG00000011199	RPP40	100	84.022	Ictidomys_tridecemlineatus
ENSCJAG00000021373	RPP40	100	77.941	ENSJJAG00000020629	Rpp40	100	77.941	Jaculus_jaculus
ENSCJAG00000021373	RPP40	98	36.975	ENSKMAG00000019358	rpp40	99	36.975	Kryptolebias_marmoratus
ENSCJAG00000021373	RPP40	98	39.776	ENSLBEG00000022724	rpp40	99	39.776	Labrus_bergylta
ENSCJAG00000021373	RPP40	99	59.444	ENSLACG00000014848	RPP40	99	59.444	Latimeria_chalumnae
ENSCJAG00000021373	RPP40	100	52.617	ENSLOCG00000011650	rpp40	100	52.617	Lepisosteus_oculatus
ENSCJAG00000021373	RPP40	83	83.828	ENSLAFG00000007530	RPP40	100	83.828	Loxodonta_africana
ENSCJAG00000021373	RPP40	100	94.412	ENSMFAG00000043100	RPP40	100	94.412	Macaca_fascicularis
ENSCJAG00000021373	RPP40	100	94.118	ENSMMUG00000004966	RPP40	100	94.118	Macaca_mulatta
ENSCJAG00000021373	RPP40	100	95.000	ENSMNEG00000041986	RPP40	100	95.000	Macaca_nemestrina
ENSCJAG00000021373	RPP40	98	85.373	ENSMLEG00000040851	RPP40	100	92.135	Mandrillus_leucophaeus
ENSCJAG00000021373	RPP40	98	38.375	ENSMAMG00000019551	rpp40	98	38.375	Mastacembelus_armatus
ENSCJAG00000021373	RPP40	99	38.504	ENSMZEG00005019475	rpp40	99	38.504	Maylandia_zebra
ENSCJAG00000021373	RPP40	99	61.389	ENSMGAG00000004009	RPP40	99	61.389	Meleagris_gallopavo
ENSCJAG00000021373	RPP40	100	81.543	ENSMAUG00000010268	Rpp40	100	81.543	Mesocricetus_auratus
ENSCJAG00000021373	RPP40	100	86.226	ENSMICG00000003297	RPP40	100	85.670	Microcebus_murinus
ENSCJAG00000021373	RPP40	100	81.765	ENSMOCG00000000305	Rpp40	100	81.765	Microtus_ochrogaster
ENSCJAG00000021373	RPP40	98	34.320	ENSMMOG00000020591	-	99	34.320	Mola_mola
ENSCJAG00000021373	RPP40	100	79.396	ENSMODG00000009826	RPP40	100	79.396	Monodelphis_domestica
ENSCJAG00000021373	RPP40	98	38.730	ENSMALG00000020133	rpp40	99	38.375	Monopterus_albus
ENSCJAG00000021373	RPP40	100	81.543	MGP_CAROLIEiJ_G0018429	Rpp40	100	81.543	Mus_caroli
ENSCJAG00000021373	RPP40	100	82.920	ENSMUSG00000021418	Rpp40	100	82.920	Mus_musculus
ENSCJAG00000021373	RPP40	100	80.992	MGP_PahariEiJ_G0019497	Rpp40	100	80.992	Mus_pahari
ENSCJAG00000021373	RPP40	100	82.369	MGP_SPRETEiJ_G0019309	Rpp40	100	82.369	Mus_spretus
ENSCJAG00000021373	RPP40	100	85.675	ENSMPUG00000000530	RPP40	93	85.675	Mustela_putorius_furo
ENSCJAG00000021373	RPP40	100	84.298	ENSMLUG00000000501	RPP40	100	84.298	Myotis_lucifugus
ENSCJAG00000021373	RPP40	100	85.124	ENSNGAG00000023955	-	100	85.124	Nannospalax_galili
ENSCJAG00000021373	RPP40	95	75.723	ENSNGAG00000022529	-	100	75.723	Nannospalax_galili
ENSCJAG00000021373	RPP40	87	36.667	ENSNBRG00000017465	rpp40	86	36.842	Neolamprologus_brichardi
ENSCJAG00000021373	RPP40	100	94.412	ENSNLEG00000034397	RPP40	100	94.412	Nomascus_leucogenys
ENSCJAG00000021373	RPP40	100	73.554	ENSMEUG00000005300	RPP40	100	73.554	Notamacropus_eugenii
ENSCJAG00000021373	RPP40	88	82.274	ENSODEG00000006170	-	100	82.274	Octodon_degus
ENSCJAG00000021373	RPP40	100	77.961	ENSODEG00000018153	-	100	77.961	Octodon_degus
ENSCJAG00000021373	RPP40	100	82.094	ENSODEG00000007255	-	100	82.094	Octodon_degus
ENSCJAG00000021373	RPP40	99	38.504	ENSONIG00000014016	rpp40	99	38.504	Oreochromis_niloticus
ENSCJAG00000021373	RPP40	83	74.172	ENSOANG00000001200	RPP40	99	74.172	Ornithorhynchus_anatinus
ENSCJAG00000021373	RPP40	99	75.069	ENSOCUG00000000354	RPP40	99	75.069	Oryctolagus_cuniculus
ENSCJAG00000021373	RPP40	99	37.222	ENSORLG00000008242	-	100	37.222	Oryzias_latipes
ENSCJAG00000021373	RPP40	99	36.389	ENSORLG00020013745	-	91	36.389	Oryzias_latipes_hni
ENSCJAG00000021373	RPP40	99	36.944	ENSORLG00015000887	-	100	36.944	Oryzias_latipes_hsok
ENSCJAG00000021373	RPP40	99	37.396	ENSOMEG00000002747	rpp40	100	37.396	Oryzias_melastigma
ENSCJAG00000021373	RPP40	100	87.603	ENSOGAG00000006055	RPP40	100	87.603	Otolemur_garnettii
ENSCJAG00000021373	RPP40	89	80.864	ENSOARG00000018783	RPP40	100	80.858	Ovis_aries
ENSCJAG00000021373	RPP40	100	95.639	ENSPPAG00000023703	RPP40	100	95.639	Pan_paniscus
ENSCJAG00000021373	RPP40	100	86.226	ENSPPRG00000005612	RPP40	100	86.226	Panthera_pardus
ENSCJAG00000021373	RPP40	92	88.462	ENSPTIG00000018847	RPP40	100	79.614	Panthera_tigris_altaica
ENSCJAG00000021373	RPP40	100	95.327	ENSPTRG00000017690	RPP40	100	95.327	Pan_troglodytes
ENSCJAG00000021373	RPP40	100	94.490	ENSPANG00000017865	RPP40	100	94.490	Papio_anubis
ENSCJAG00000021373	RPP40	98	48.883	ENSPKIG00000006311	rpp40	99	48.747	Paramormyrops_kingsleyae
ENSCJAG00000021373	RPP40	65	70.270	ENSPSIG00000007854	RPP40	100	70.270	Pelodiscus_sinensis
ENSCJAG00000021373	RPP40	92	76.752	ENSPEMG00000020809	Rpp40	91	76.752	Peromyscus_maniculatus_bairdii
ENSCJAG00000021373	RPP40	81	41.007	ENSPMAG00000008412	rpp40	99	45.255	Petromyzon_marinus
ENSCJAG00000021373	RPP40	100	80.441	ENSPCIG00000010682	RPP40	100	80.441	Phascolarctos_cinereus
ENSCJAG00000021373	RPP40	98	35.376	ENSPFOG00000011460	rpp40	98	35.376	Poecilia_formosa
ENSCJAG00000021373	RPP40	98	36.134	ENSPLAG00000001334	rpp40	99	36.134	Poecilia_latipinna
ENSCJAG00000021373	RPP40	98	35.854	ENSPMEG00000007721	rpp40	99	35.854	Poecilia_mexicana
ENSCJAG00000021373	RPP40	98	36.975	ENSPREG00000009215	rpp40	99	36.975	Poecilia_reticulata
ENSCJAG00000021373	RPP40	100	95.041	ENSPPYG00000016194	RPP40	100	95.041	Pongo_abelii
ENSCJAG00000021373	RPP40	83	82.258	ENSPCAG00000002700	-	100	82.258	Procavia_capensis
ENSCJAG00000021373	RPP40	100	87.603	ENSPCOG00000003907	RPP40	100	87.603	Propithecus_coquereli
ENSCJAG00000021373	RPP40	100	87.328	ENSPVAG00000011325	RPP40	100	87.328	Pteropus_vampyrus
ENSCJAG00000021373	RPP40	82	37.584	ENSPNYG00000004432	rpp40	98	37.584	Pundamilia_nyererei
ENSCJAG00000021373	RPP40	98	46.369	ENSPNAG00000019125	rpp40	99	46.369	Pygocentrus_nattereri
ENSCJAG00000021373	RPP40	100	82.094	ENSRNOG00000016226	Rpp40	100	82.838	Rattus_norvegicus
ENSCJAG00000021373	RPP40	100	95.317	ENSRBIG00000035800	RPP40	100	95.380	Rhinopithecus_bieti
ENSCJAG00000021373	RPP40	100	95.317	ENSRROG00000039116	RPP40	100	95.317	Rhinopithecus_roxellana
ENSCJAG00000021373	RPP40	100	98.442	ENSSBOG00000020297	RPP40	100	98.442	Saimiri_boliviensis_boliviensis
ENSCJAG00000021373	RPP40	77	78.777	ENSSHAG00000002102	RPP40	100	78.777	Sarcophilus_harrisii
ENSCJAG00000021373	RPP40	99	47.934	ENSSFOG00015001142	rpp40	81	47.934	Scleropages_formosus
ENSCJAG00000021373	RPP40	98	36.695	ENSSDUG00000007202	rpp40	99	36.695	Seriola_dumerili
ENSCJAG00000021373	RPP40	98	36.975	ENSSLDG00000017563	rpp40	99	36.975	Seriola_lalandi_dorsalis
ENSCJAG00000021373	RPP40	99	66.111	ENSSPUG00000017487	-	99	66.111	Sphenodon_punctatus
ENSCJAG00000021373	RPP40	81	64.746	ENSSPUG00000018950	-	100	64.746	Sphenodon_punctatus
ENSCJAG00000021373	RPP40	98	39.216	ENSSPAG00000022716	rpp40	99	39.216	Stegastes_partitus
ENSCJAG00000021373	RPP40	100	81.620	ENSSSCG00000000998	RPP40	100	81.620	Sus_scrofa
ENSCJAG00000021373	RPP40	99	64.246	ENSTGUG00000002258	-	100	64.246	Taeniopygia_guttata
ENSCJAG00000021373	RPP40	55	69.886	ENSTGUG00000015246	-	100	70.056	Taeniopygia_guttata
ENSCJAG00000021373	RPP40	97	39.093	ENSTRUG00000003755	rpp40	98	39.093	Takifugu_rubripes
ENSCJAG00000021373	RPP40	97	36.544	ENSTNIG00000003077	rpp40	98	36.544	Tetraodon_nigroviridis
ENSCJAG00000021373	RPP40	73	59.839	ENSTBEG00000014467	-	73	59.839	Tupaia_belangeri
ENSCJAG00000021373	RPP40	99	76.243	ENSTTRG00000007319	RPP40	100	76.243	Tursiops_truncatus
ENSCJAG00000021373	RPP40	100	85.950	ENSUAMG00000002159	RPP40	100	85.950	Ursus_americanus
ENSCJAG00000021373	RPP40	100	85.950	ENSUMAG00000018639	RPP40	94	85.950	Ursus_maritimus
ENSCJAG00000021373	RPP40	92	57.005	ENSVPAG00000004652	-	99	61.905	Vicugna_pacos
ENSCJAG00000021373	RPP40	100	84.848	ENSVVUG00000005451	RPP40	100	84.848	Vulpes_vulpes
ENSCJAG00000021373	RPP40	99	53.973	ENSXETG00000017617	rpp40	100	53.973	Xenopus_tropicalis
ENSCJAG00000021373	RPP40	63	42.520	ENSXCOG00000019991	-	89	31.402	Xiphophorus_couchianus
ENSCJAG00000021373	RPP40	98	31.325	ENSXMAG00000024940	rpp40	98	31.325	Xiphophorus_maculatus