EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCJAG00000021485 (Gene tree)
Gene ID
100394446
Gene Symbol
PUF60
Alias
FIR|RoBPI|SIAHBP1
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Callithrix_jacchus
Status
putative
Strand
Minus strand
Length
12715 bases
Position
chrNTIC01007779.1:45228278-45240992
Accession
100394446
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCJAP00000040008RRM_1PF00076.222.7e-4312
ENSCJAP00000040008RRM_1PF00076.222.7e-4322
ENSCJAP00000040005RRM_1PF00076.222.8e-4312
ENSCJAP00000040005RRM_1PF00076.222.8e-4322
ENSCJAP00000040006RRM_1PF00076.223.1e-4312
ENSCJAP00000040006RRM_1PF00076.223.1e-4322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCJAT00000042264PUF60-2021644-ENSCJAP00000040008547 (aa)XP_008981284F7ILN8
ENSCJAT00000042261PUF60-2031593-ENSCJAP00000040005530 (aa)XP_008981287F7ILP2
ENSCJAT00000042262PUF60-2011695-ENSCJAP00000040006564 (aa)XP_008981283F7ILP0
Gene Model
Click here to download ENSCJAG00000021485's gene model file
Pathways
Pathway IDPathway NameSource
cjc03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000021485's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCJAG00000021485PUF605136.000ENSCJAG00000017128U2AF26337.255
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCJAG00000021485PUF6010099.811ENSG00000179950PUF6010099.811Homo_sapiens
ENSCJAG00000021485PUF609885.389ENSAPOG00000001713puf60b9985.417Acanthochromis_polyacanthus
ENSCJAG00000021485PUF609897.701ENSAMEG00000006406PUF609996.270Ailuropoda_melanoleuca
ENSCJAG00000021485PUF609777.159ENSACIG00000003263-9977.586Amphilophus_citrinellus
ENSCJAG00000021485PUF609785.413ENSACIG00000021705puf60b10085.413Amphilophus_citrinellus
ENSCJAG00000021485PUF609885.389ENSAOCG00000005395puf60b10086.180Amphiprion_ocellaris
ENSCJAG00000021485PUF6010080.712ENSAOCG00000015558-10081.273Amphiprion_ocellaris
ENSCJAG00000021485PUF609772.553ENSAPEG00000001836-9976.471Amphiprion_percula
ENSCJAG00000021485PUF609879.886ENSAPEG00000011923puf60b9982.583Amphiprion_percula
ENSCJAG00000021485PUF609980.377ENSATEG00000006303-9981.333Anabas_testudineus
ENSCJAG00000021485PUF609885.199ENSATEG00000001730puf60b9985.227Anabas_testudineus
ENSCJAG00000021485PUF609898.276ENSAPLG00000010150PUF6010098.276Anas_platyrhynchos
ENSCJAG00000021485PUF609996.388ENSACAG00000001645PUF609896.212Anolis_carolinensis
ENSCJAG00000021485PUF6010099.811ENSANAG00000018626PUF6010099.811Aotus_nancymaae
ENSCJAG00000021485PUF609785.413ENSACLG00000004462puf60b10085.413Astatotilapia_calliptera
ENSCJAG00000021485PUF609776.449ENSAMXG00000041030puf60b10076.735Astyanax_mexicanus
ENSCJAG00000021485PUF609884.299ENSAMXG00000036570puf60a9784.932Astyanax_mexicanus
ENSCJAG00000021485PUF6010099.434ENSBTAG00000037493PUF6010099.434Bos_taurus
ENSCJAG00000021485PUF608050.162WBGene00004389rnp-68353.497Caenorhabditis_elegans
ENSCJAG00000021485PUF6010099.086ENSCAFG00000001400PUF6010099.086Canis_familiaris
ENSCJAG00000021485PUF6010099.811ENSCAFG00020018754PUF6010099.811Canis_lupus_dingo
ENSCJAG00000021485PUF609899.425ENSCHIG00000001618PUF609298.381Capra_hircus
ENSCJAG00000021485PUF6010099.623ENSTSYG00000011912PUF6010099.806Carlito_syrichta
ENSCJAG00000021485PUF609993.238ENSCPOG00000014613PUF609992.883Cavia_porcellus
ENSCJAG00000021485PUF6010099.811ENSCCAG00000007744PUF6010099.811Cebus_capucinus
ENSCJAG00000021485PUF6010099.811ENSCATG00000035405PUF6010099.811Cercocebus_atys
ENSCJAG00000021485PUF6010099.645ENSCLAG00000009154PUF6010099.645Chinchilla_lanigera
ENSCJAG00000021485PUF609799.806ENSCSAG00000008878PUF6010099.806Chlorocebus_sabaeus
ENSCJAG00000021485PUF609997.917ENSCPBG00000005595PUF609997.917Chrysemys_picta_bellii
ENSCJAG00000021485PUF6010048.175ENSCING00000008436-9948.244Ciona_intestinalis
ENSCJAG00000021485PUF606259.882ENSCING00000002156-8763.043Ciona_intestinalis
ENSCJAG00000021485PUF609549.605ENSCSAVG00000004765-9750.412Ciona_savignyi
ENSCJAG00000021485PUF609555.364ENSCSAVG00000001385-9955.000Ciona_savignyi
ENSCJAG00000021485PUF607999.760ENSCANG00000041843PUF6010099.760Colobus_angolensis_palliatus
ENSCJAG00000021485PUF6010098.936ENSCGRG00001017442Puf6010098.936Cricetulus_griseus_chok1gshd
ENSCJAG00000021485PUF609898.851ENSCGRG00000003717Puf609997.842Cricetulus_griseus_crigri
ENSCJAG00000021485PUF609884.630ENSCSEG00000019887puf60b9384.440Cynoglossus_semilaevis
ENSCJAG00000021485PUF609971.269ENSCSEG00000014845-8977.273Cynoglossus_semilaevis
ENSCJAG00000021485PUF609784.645ENSCVAG00000009386puf60b10085.797Cyprinodon_variegatus
ENSCJAG00000021485PUF608979.789ENSCVAG00000001560-9879.536Cyprinodon_variegatus
ENSCJAG00000021485PUF609787.146ENSDARG00000032175puf60a9994.043Danio_rerio
ENSCJAG00000021485PUF609778.759ENSDARG00000001241puf60b9996.032Danio_rerio
ENSCJAG00000021485PUF609981.071ENSDNOG00000043278PUF609881.071Dasypus_novemcinctus
ENSCJAG00000021485PUF609998.561ENSDORG00000004585Puf6010098.561Dipodomys_ordii
ENSCJAG00000021485PUF609548.969FBgn0028577hfp9949.554Drosophila_melanogaster
ENSCJAG00000021485PUF609860.672ENSEBUG00000014291puf60b8565.739Eptatretus_burgeri
ENSCJAG00000021485PUF609570.040ENSEBUG00000005470-8872.222Eptatretus_burgeri
ENSCJAG00000021485PUF6010099.811ENSEASG00005009695PUF6010099.811Equus_asinus_asinus
ENSCJAG00000021485PUF609999.281ENSECAG00000024681PUF609999.281Equus_caballus
ENSCJAG00000021485PUF6010082.022ENSELUG00000006507puf60b10079.286Esox_lucius
ENSCJAG00000021485PUF6010084.387ENSELUG00000018443-9985.602Esox_lucius
ENSCJAG00000021485PUF6010099.468ENSFCAG00000001045PUF6010099.468Felis_catus
ENSCJAG00000021485PUF609985.687ENSFALG00000001136PUF609986.857Ficedula_albicollis
ENSCJAG00000021485PUF6010099.291ENSFDAG00000017177PUF6010099.291Fukomys_damarensis
ENSCJAG00000021485PUF609379.116ENSFHEG00000021687PUF6010079.959Fundulus_heteroclitus
ENSCJAG00000021485PUF6010083.364ENSFHEG00000020046puf60b10085.988Fundulus_heteroclitus
ENSCJAG00000021485PUF609871.617ENSGMOG00000006392puf60b10070.865Gadus_morhua
ENSCJAG00000021485PUF606598.256ENSGALG00000039901PUF609498.256Gallus_gallus
ENSCJAG00000021485PUF609779.344ENSGAFG00000004334-9978.842Gambusia_affinis
ENSCJAG00000021485PUF6010082.617ENSGAFG00000021040puf60b10085.413Gambusia_affinis
ENSCJAG00000021485PUF6010073.184ENSGACG00000004717puf60b10072.523Gasterosteus_aculeatus
ENSCJAG00000021485PUF609969.450ENSGACG00000001484-10069.231Gasterosteus_aculeatus
ENSCJAG00000021485PUF609997.917ENSGAGG00000013289PUF609397.917Gopherus_agassizii
ENSCJAG00000021485PUF6010099.811ENSGGOG00000004646PUF6010099.811Gorilla_gorilla
ENSCJAG00000021485PUF609981.015ENSHBUG00000009634-10082.540Haplochromis_burtoni
ENSCJAG00000021485PUF609884.630ENSHBUG00000015118puf60b10085.413Haplochromis_burtoni
ENSCJAG00000021485PUF6010099.291ENSHGLG00000006111PUF6010099.291Heterocephalus_glaber_female
ENSCJAG00000021485PUF6010099.291ENSHGLG00100012362PUF6010099.291Heterocephalus_glaber_male
ENSCJAG00000021485PUF609666.601ENSHCOG00000000378-9964.850Hippocampus_comes
ENSCJAG00000021485PUF609881.952ENSHCOG00000015541puf60b10081.550Hippocampus_comes
ENSCJAG00000021485PUF609778.571ENSIPUG00000004660puf60b9978.343Ictalurus_punctatus
ENSCJAG00000021485PUF609782.420ENSIPUG00000002453puf60a9982.798Ictalurus_punctatus
ENSCJAG00000021485PUF6010098.582ENSSTOG00000025037PUF6010098.582Ictidomys_tridecemlineatus
ENSCJAG00000021485PUF6010098.759ENSJJAG00000001076Puf6010098.759Jaculus_jaculus
ENSCJAG00000021485PUF609784.837ENSKMAG00000016745puf60b10085.988Kryptolebias_marmoratus
ENSCJAG00000021485PUF609778.261ENSKMAG00000010106-10075.746Kryptolebias_marmoratus
ENSCJAG00000021485PUF609983.117ENSLBEG00000012505puf60b10083.117Labrus_bergylta
ENSCJAG00000021485PUF606890.909ENSLACG00000005456PUF6010090.437Latimeria_chalumnae
ENSCJAG00000021485PUF6010089.681ENSLOCG00000010106puf60b10088.555Lepisosteus_oculatus
ENSCJAG00000021485PUF609898.084ENSLAFG00000022929PUF6010095.382Loxodonta_africana
ENSCJAG00000021485PUF6010099.811ENSMFAG00000043373PUF6010099.811Macaca_fascicularis
ENSCJAG00000021485PUF6010099.811ENSMMUG00000013558PUF6010099.811Macaca_mulatta
ENSCJAG00000021485PUF6010099.811ENSMNEG00000031099PUF6010099.811Macaca_nemestrina
ENSCJAG00000021485PUF609799.806ENSMLEG00000040009PUF6010099.806Mandrillus_leucophaeus
ENSCJAG00000021485PUF609981.767ENSMAMG00000019476-9981.973Mastacembelus_armatus
ENSCJAG00000021485PUF609885.009ENSMAMG00000010394puf60b10083.551Mastacembelus_armatus
ENSCJAG00000021485PUF609981.203ENSMZEG00005019425-9981.784Maylandia_zebra
ENSCJAG00000021485PUF609785.413ENSMZEG00005018515puf60b10085.413Maylandia_zebra
ENSCJAG00000021485PUF609997.905ENSMGAG00000013070PUF609997.905Meleagris_gallopavo
ENSCJAG00000021485PUF607299.020ENSMAUG00000014267-10099.020Mesocricetus_auratus
ENSCJAG00000021485PUF6010076.636ENSMAUG00000018549-10076.636Mesocricetus_auratus
ENSCJAG00000021485PUF6010099.811ENSMICG00000012226PUF6010099.811Microcebus_murinus
ENSCJAG00000021485PUF6010099.113ENSMOCG00000018780Puf6010099.113Microtus_ochrogaster
ENSCJAG00000021485PUF609785.605ENSMMOG00000004217puf60b10085.605Mola_mola
ENSCJAG00000021485PUF609872.658ENSMMOG00000018059-9976.484Mola_mola
ENSCJAG00000021485PUF609899.042ENSMODG00000009161PUF6010096.892Monodelphis_domestica
ENSCJAG00000021485PUF609877.609ENSMALG00000006797puf60b9977.652Monopterus_albus
ENSCJAG00000021485PUF609979.887ENSMALG00000000200-9979.057Monopterus_albus
ENSCJAG00000021485PUF6010098.936MGP_CAROLIEiJ_G0019910Puf6010098.936Mus_caroli
ENSCJAG00000021485PUF6010098.936ENSMUSG00000002524Puf6010098.936Mus_musculus
ENSCJAG00000021485PUF6010098.936MGP_PahariEiJ_G0019920Puf6010098.936Mus_pahari
ENSCJAG00000021485PUF6010098.936MGP_SPRETEiJ_G0020812Puf6010098.936Mus_spretus
ENSCJAG00000021485PUF609899.425ENSMPUG00000008137PUF609798.201Mustela_putorius_furo
ENSCJAG00000021485PUF6010091.698ENSMLUG00000013032-9895.248Myotis_lucifugus
ENSCJAG00000021485PUF609997.662ENSMLUG00000000238-9897.662Myotis_lucifugus
ENSCJAG00000021485PUF6010099.291ENSNGAG00000000712Puf6010099.291Nannospalax_galili
ENSCJAG00000021485PUF609981.391ENSNBRG00000017223-9981.939Neolamprologus_brichardi
ENSCJAG00000021485PUF608281.236ENSNBRG00000013047puf60b9784.235Neolamprologus_brichardi
ENSCJAG00000021485PUF6010098.936ENSNLEG00000002156PUF6010098.936Nomascus_leucogenys
ENSCJAG00000021485PUF607399.659ENSOPRG00000002147PUF607599.659Ochotona_princeps
ENSCJAG00000021485PUF609573.964ENSODEG00000015513-9971.186Octodon_degus
ENSCJAG00000021485PUF6074100.000ENSODEG00000014024-100100.000Octodon_degus
ENSCJAG00000021485PUF609884.630ENSONIG00000006247puf60b9984.659Oreochromis_niloticus
ENSCJAG00000021485PUF609981.579ENSONIG00000014030-9982.008Oreochromis_niloticus
ENSCJAG00000021485PUF609678.558ENSOANG00000006962PUF609978.363Ornithorhynchus_anatinus
ENSCJAG00000021485PUF609778.598ENSORLG00000028655-9978.707Oryzias_latipes
ENSCJAG00000021485PUF609884.630ENSORLG00000012279puf60b10084.837Oryzias_latipes
ENSCJAG00000021485PUF609977.944ENSORLG00020018144-9978.049Oryzias_latipes_hni
ENSCJAG00000021485PUF609884.630ENSORLG00020007333puf6010084.837Oryzias_latipes_hni
ENSCJAG00000021485PUF609978.067ENSORLG00015016833-9978.172Oryzias_latipes_hsok
ENSCJAG00000021485PUF609883.743ENSORLG00015007718puf60b10084.704Oryzias_latipes_hsok
ENSCJAG00000021485PUF609978.947ENSOMEG00000022185-9978.947Oryzias_melastigma
ENSCJAG00000021485PUF609882.342ENSOMEG00000001643puf60b9983.030Oryzias_melastigma
ENSCJAG00000021485PUF609899.617ENSOGAG00000006259PUF609997.691Otolemur_garnettii
ENSCJAG00000021485PUF609896.935ENSOARG00000016235PUF609996.941Ovis_aries
ENSCJAG00000021485PUF6010099.811ENSPPAG00000029933PUF6010099.811Pan_paniscus
ENSCJAG00000021485PUF6010099.468ENSPPRG00000003257PUF6010099.468Panthera_pardus
ENSCJAG00000021485PUF609997.963ENSPTIG00000009795PUF609997.126Panthera_tigris_altaica
ENSCJAG00000021485PUF6010099.623ENSPTRG00000020670PUF6010099.623Pan_troglodytes
ENSCJAG00000021485PUF609999.241ENSPTRG00000043963-9999.241Pan_troglodytes
ENSCJAG00000021485PUF6010099.811ENSPANG00000021936PUF6010099.811Papio_anubis
ENSCJAG00000021485PUF6010085.289ENSPKIG00000004295puf60a9992.353Paramormyrops_kingsleyae
ENSCJAG00000021485PUF6010086.517ENSPKIG00000012204puf60b10087.885Paramormyrops_kingsleyae
ENSCJAG00000021485PUF609898.084ENSPSIG00000004679PUF609998.088Pelodiscus_sinensis
ENSCJAG00000021485PUF609784.351ENSPMGG00000013444puf60b9984.351Periophthalmus_magnuspinnatus
ENSCJAG00000021485PUF6010099.113ENSPEMG00000008820Puf6010099.113Peromyscus_maniculatus_bairdii
ENSCJAG00000021485PUF609999.235ENSPCIG00000020270PUF609999.424Phascolarctos_cinereus
ENSCJAG00000021485PUF609979.434ENSPFOG00000011118-9979.773Poecilia_formosa
ENSCJAG00000021485PUF6010083.364ENSPFOG00000019217puf60b10084.630Poecilia_formosa
ENSCJAG00000021485PUF609784.837ENSPLAG00000010754puf60b10085.988Poecilia_latipinna
ENSCJAG00000021485PUF609979.434ENSPLAG00000017025-9279.395Poecilia_latipinna
ENSCJAG00000021485PUF609979.434ENSPMEG00000009767-9279.773Poecilia_mexicana
ENSCJAG00000021485PUF6010083.364ENSPMEG00000000838puf60b10085.988Poecilia_mexicana
ENSCJAG00000021485PUF6010080.692ENSPREG00000005440puf60b10083.730Poecilia_reticulata
ENSCJAG00000021485PUF607998.082ENSPPYG00000018951-9598.082Pongo_abelii
ENSCJAG00000021485PUF607999.520ENSPCAG00000014837PUF6010099.520Procavia_capensis
ENSCJAG00000021485PUF6010099.623ENSPCOG00000027981PUF6010099.623Propithecus_coquereli
ENSCJAG00000021485PUF6097100.000ENSPVAG00000016167PUF6081100.000Pteropus_vampyrus
ENSCJAG00000021485PUF609785.413ENSPNYG00000002556puf60b10085.413Pundamilia_nyererei
ENSCJAG00000021485PUF609981.203ENSPNYG00000004273-9981.784Pundamilia_nyererei
ENSCJAG00000021485PUF609877.481ENSPNAG00000019415puf60b9178.794Pygocentrus_nattereri
ENSCJAG00000021485PUF609982.264ENSPNAG00000019909puf60a9984.961Pygocentrus_nattereri
ENSCJAG00000021485PUF6010098.903ENSRNOG00000009960Puf6010098.903Rattus_norvegicus
ENSCJAG00000021485PUF6010099.811ENSRBIG00000035274PUF6010099.811Rhinopithecus_bieti
ENSCJAG00000021485PUF6010099.811ENSRROG00000029360PUF6010099.811Rhinopithecus_roxellana
ENSCJAG00000021485PUF609998.110ENSSBOG00000027089PUF609998.110Saimiri_boliviensis_boliviensis
ENSCJAG00000021485PUF608998.936ENSSHAG00000006668PUF609696.094Sarcophilus_harrisii
ENSCJAG00000021485PUF6010080.714ENSSFOG00015019371puf60a9887.123Scleropages_formosus
ENSCJAG00000021485PUF609386.235ENSSFOG00015019619puf60b9986.235Scleropages_formosus
ENSCJAG00000021485PUF607391.638ENSSMAG00000016381puf60b7491.638Scophthalmus_maximus
ENSCJAG00000021485PUF609979.395ENSSDUG00000007048-9979.773Seriola_dumerili
ENSCJAG00000021485PUF609983.302ENSSDUG00000009935puf60b10083.302Seriola_dumerili
ENSCJAG00000021485PUF609885.361ENSSLDG00000024011puf60b10083.738Seriola_lalandi_dorsalis
ENSCJAG00000021485PUF609780.228ENSSLDG00000007366-9980.645Seriola_lalandi_dorsalis
ENSCJAG00000021485PUF606585.260ENSSPUG00000013518PUF609485.757Sphenodon_punctatus
ENSCJAG00000021485PUF609882.625ENSSPAG00000012144puf60b10083.925Stegastes_partitus
ENSCJAG00000021485PUF609781.870ENSSPAG00000020285-10082.443Stegastes_partitus
ENSCJAG00000021485PUF609899.042ENSSSCG00000038800PUF609899.010Sus_scrofa
ENSCJAG00000021485PUF609895.019ENSTGUG00000012797-10095.019Taeniopygia_guttata
ENSCJAG00000021485PUF609884.061ENSTRUG00000005420puf60b10082.617Takifugu_rubripes
ENSCJAG00000021485PUF609777.519ENSTRUG00000008843-10080.160Takifugu_rubripes
ENSCJAG00000021485PUF609884.061ENSTNIG00000013675puf60b10083.902Tetraodon_nigroviridis
ENSCJAG00000021485PUF609877.778ENSTNIG00000003069-10077.820Tetraodon_nigroviridis
ENSCJAG00000021485PUF606095.946ENSTBEG00000002751-9995.932Tupaia_belangeri
ENSCJAG00000021485PUF607981.214ENSTBEG00000001899-10081.503Tupaia_belangeri
ENSCJAG00000021485PUF609798.837ENSTTRG00000017088PUF6010098.837Tursiops_truncatus
ENSCJAG00000021485PUF6010099.811ENSUAMG00000024917PUF6010099.811Ursus_americanus
ENSCJAG00000021485PUF609895.019ENSUMAG00000000272PUF609993.525Ursus_maritimus
ENSCJAG00000021485PUF609899.808ENSVVUG00000022527PUF6010099.806Vulpes_vulpes
ENSCJAG00000021485PUF609993.371ENSXETG00000012469puf609994.444Xenopus_tropicalis
ENSCJAG00000021485PUF609781.574ENSXCOG00000012355puf60b10085.516Xiphophorus_couchianus
ENSCJAG00000021485PUF6010083.364ENSXMAG00000001862puf60b10085.988Xiphophorus_maculatus
ENSCJAG00000021485PUF609778.378ENSXMAG00000010507-9979.528Xiphophorus_maculatus

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