EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000021660 (Gene tree)
Gene ID: 100396927
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 24572 bases
Position: chrNTIC01000002.1:118793571-118818142
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000040311	CSD	PF00313.22	5.9e-26	1	1
ENSCJAP00000040313	CSD	PF00313.22	6.9e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000042581	-	2333	-	ENSCJAP00000040313	370 (aa)	-	F7I066
ENSCJAT00000042579	-	906	-	ENSCJAP00000040311	301 (aa)	-	F7I069

Gene Model

Click here to download ENSCJAG00000021660's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000021660's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000021660	-	96	72.069	ENSCJAG00000033824	-	98	93.243
ENSCJAG00000021660	-	81	51.592	ENSCJAG00000003155	YBX1	85	56.040

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000021660	-	100	95.968	ENSG00000060138	YBX3	100	95.968	Homo_sapiens
ENSCJAG00000021660	-	97	84.916	ENSAMEG00000009393	YBX3	95	89.118	Ailuropoda_melanoleuca
ENSCJAG00000021660	-	77	66.084	ENSAPLG00000003147	YBX3	68	100.000	Anas_platyrhynchos
ENSCJAG00000021660	-	98	87.692	ENSANAG00000033366	-	93	87.692	Aotus_nancymaae
ENSCJAG00000021660	-	100	97.844	ENSANAG00000024492	-	100	98.101	Aotus_nancymaae
ENSCJAG00000021660	-	100	82.429	ENSBTAG00000009663	YBX3	88	81.471	Bos_taurus
ENSCJAG00000021660	-	78	92.361	ENSCAFG00000013401	YBX3	100	92.661	Canis_familiaris
ENSCJAG00000021660	-	100	87.200	ENSCAFG00020006412	YBX3	100	85.867	Canis_lupus_dingo
ENSCJAG00000021660	-	100	82.429	ENSCHIG00000010863	YBX3	100	80.811	Capra_hircus
ENSCJAG00000021660	-	78	94.774	ENSTSYG00000004204	-	88	94.774	Carlito_syrichta
ENSCJAG00000021660	-	100	75.497	ENSTSYG00000035821	-	72	95.745	Carlito_syrichta
ENSCJAG00000021660	-	78	86.760	ENSCAPG00000015039	YBX3	93	86.760	Cavia_aperea
ENSCJAG00000021660	-	79	87.713	ENSCPOG00000011329	YBX3	86	87.713	Cavia_porcellus
ENSCJAG00000021660	-	100	97.043	ENSCCAG00000016469	YBX3	100	97.043	Cebus_capucinus
ENSCJAG00000021660	-	100	95.174	ENSCATG00000034411	YBX3	100	95.174	Cercocebus_atys
ENSCJAG00000021660	-	78	87.108	ENSCLAG00000016030	YBX3	94	87.108	Chinchilla_lanigera
ENSCJAG00000021660	-	100	95.710	ENSCSAG00000008744	YBX3	100	95.710	Chlorocebus_sabaeus
ENSCJAG00000021660	-	94	82.081	ENSCHOG00000011988	YBX3	77	82.081	Choloepus_hoffmanni
ENSCJAG00000021660	-	78	79.381	ENSCPBG00000014147	YBX3	81	78.498	Chrysemys_picta_bellii
ENSCJAG00000021660	-	61	54.011	ENSCING00000010654	yb1/2/3	73	49.767	Ciona_intestinalis
ENSCJAG00000021660	-	85	97.460	ENSCANG00000036801	YBX3	100	97.460	Colobus_angolensis_palliatus
ENSCJAG00000021660	-	86	89.308	ENSCGRG00001016148	Ybx3	100	84.367	Cricetulus_griseus_chok1gshd
ENSCJAG00000021660	-	78	90.753	ENSCGRG00000004563	Ybx3	98	89.384	Cricetulus_griseus_crigri
ENSCJAG00000021660	-	77	91.930	ENSDORG00000009103	Ybx3	81	91.289	Dipodomys_ordii
ENSCJAG00000021660	-	77	84.615	ENSETEG00000002557	YBX3	99	83.451	Echinops_telfairi
ENSCJAG00000021660	-	100	85.445	ENSEASG00005014726	YBX3	100	85.175	Equus_asinus_asinus
ENSCJAG00000021660	-	100	88.410	ENSECAG00000013777	YBX3	100	88.949	Equus_caballus
ENSCJAG00000021660	-	77	92.254	ENSEEUG00000010415	YBX3	100	92.254	Erinaceus_europaeus
ENSCJAG00000021660	-	100	91.475	ENSFCAG00000027748	YBX3	100	92.787	Felis_catus
ENSCJAG00000021660	-	72	94.444	ENSFALG00000003661	YBX3	71	98.837	Ficedula_albicollis
ENSCJAG00000021660	-	78	83.624	ENSFDAG00000021192	YBX3	92	83.624	Fukomys_damarensis
ENSCJAG00000021660	-	73	83.636	ENSGALG00000031890	YBX3	70	97.849	Gallus_gallus
ENSCJAG00000021660	-	93	70.231	ENSGAGG00000017780	YBX3	77	82.511	Gopherus_agassizii
ENSCJAG00000021660	-	100	95.710	ENSGGOG00000001352	YBX3	100	95.710	Gorilla_gorilla
ENSCJAG00000021660	-	82	75.490	ENSHGLG00000014798	-	86	76.431	Heterocephalus_glaber_female
ENSCJAG00000021660	-	74	78.909	ENSHGLG00000015495	-	80	76.000	Heterocephalus_glaber_female
ENSCJAG00000021660	-	72	88.991	ENSHGLG00100003589	YBX3	87	88.991	Heterocephalus_glaber_male
ENSCJAG00000021660	-	78	86.411	ENSSTOG00000002108	-	88	86.411	Ictidomys_tridecemlineatus
ENSCJAG00000021660	-	94	84.682	ENSSTOG00000032577	-	100	80.270	Ictidomys_tridecemlineatus
ENSCJAG00000021660	-	80	69.360	ENSJJAG00000014239	Ybx3	96	85.227	Jaculus_jaculus
ENSCJAG00000021660	-	100	90.541	ENSLAFG00000017247	YBX3	100	92.432	Loxodonta_africana
ENSCJAG00000021660	-	100	95.430	ENSMFAG00000039369	YBX3	100	95.430	Macaca_fascicularis
ENSCJAG00000021660	-	88	96.308	ENSMMUG00000022469	YBX3	98	96.552	Macaca_mulatta
ENSCJAG00000021660	-	100	95.699	ENSMNEG00000045109	YBX3	100	95.699	Macaca_nemestrina
ENSCJAG00000021660	-	95	82.621	ENSMLEG00000033618	YBX3	79	96.864	Mandrillus_leucophaeus
ENSCJAG00000021660	-	70	98.095	ENSMGAG00000014224	YBX3	93	100.000	Meleagris_gallopavo
ENSCJAG00000021660	-	93	84.393	ENSMAUG00000012185	Ybx3	92	90.508	Mesocricetus_auratus
ENSCJAG00000021660	-	100	75.083	ENSMICG00000031459	-	86	74.900	Microcebus_murinus
ENSCJAG00000021660	-	100	89.785	ENSMICG00000038002	-	100	91.129	Microcebus_murinus
ENSCJAG00000021660	-	84	89.068	ENSMOCG00000016291	Ybx3	96	91.186	Microtus_ochrogaster
ENSCJAG00000021660	-	78	81.944	ENSMODG00000018248	YBX3	91	82.639	Monodelphis_domestica
ENSCJAG00000021660	-	86	88.365	MGP_CAROLIEiJ_G0028947	Ybx3	100	83.827	Mus_caroli
ENSCJAG00000021660	-	86	88.365	ENSMUSG00000030189	Ybx3	100	83.827	Mus_musculus
ENSCJAG00000021660	-	86	88.994	MGP_PahariEiJ_G0022709	Ybx3	100	84.367	Mus_pahari
ENSCJAG00000021660	-	86	88.679	MGP_SPRETEiJ_G0029994	Ybx3	100	84.097	Mus_spretus
ENSCJAG00000021660	-	100	78.740	ENSMPUG00000011810	YBX3	100	78.215	Mustela_putorius_furo
ENSCJAG00000021660	-	72	93.309	ENSMLUG00000007476	YBX3	100	91.822	Myotis_lucifugus
ENSCJAG00000021660	-	80	85.522	ENSNGAG00000000710	Ybx3	91	83.333	Nannospalax_galili
ENSCJAG00000021660	-	90	93.072	ENSNLEG00000034844	YBX3	91	93.417	Nomascus_leucogenys
ENSCJAG00000021660	-	82	80.263	ENSODEG00000017957	YBX3	93	80.878	Octodon_degus
ENSCJAG00000021660	-	80	87.797	ENSOCUG00000001889	YBX3	85	87.458	Oryctolagus_cuniculus
ENSCJAG00000021660	-	100	88.654	ENSOGAG00000013245	YBX3	100	88.391	Otolemur_garnettii
ENSCJAG00000021660	-	70	98.980	ENSOARG00000020919	YBX3	99	82.828	Ovis_aries
ENSCJAG00000021660	-	100	90.054	ENSPPAG00000039068	YBX3	82	97.627	Pan_paniscus
ENSCJAG00000021660	-	100	91.176	ENSPPRG00000005859	YBX3	100	92.459	Panthera_pardus
ENSCJAG00000021660	-	77	92.982	ENSPTIG00000005322	YBX3	81	92.334	Panthera_tigris_altaica
ENSCJAG00000021660	-	100	95.455	ENSPTRG00000004681	YBX3	100	95.455	Pan_troglodytes
ENSCJAG00000021660	-	100	95.430	ENSPANG00000010280	YBX3	100	95.430	Papio_anubis
ENSCJAG00000021660	-	72	84.259	ENSPSIG00000009247	YBX3	90	100.000	Pelodiscus_sinensis
ENSCJAG00000021660	-	82	88.306	ENSPEMG00000010391	-	85	91.593	Peromyscus_maniculatus_bairdii
ENSCJAG00000021660	-	88	89.198	ENSPEMG00000012132	-	92	91.525	Peromyscus_maniculatus_bairdii
ENSCJAG00000021660	-	70	80.769	ENSPCIG00000029949	YBX3	100	78.846	Phascolarctos_cinereus
ENSCJAG00000021660	-	100	95.957	ENSPPYG00000004279	YBX3	100	95.957	Pongo_abelii
ENSCJAG00000021660	-	80	96.875	ENSPCAG00000001397	YBX3	95	96.296	Procavia_capensis
ENSCJAG00000021660	-	50	70.732	ENSPCOG00000011663	YBX3	100	85.659	Propithecus_coquereli
ENSCJAG00000021660	-	100	77.867	ENSPVAG00000006740	YBX3	77	89.655	Pteropus_vampyrus
ENSCJAG00000021660	-	86	89.623	ENSRNOG00000005480	Ybx3	100	84.636	Rattus_norvegicus
ENSCJAG00000021660	-	100	95.687	ENSRBIG00000039208	YBX3	100	95.687	Rhinopithecus_bieti
ENSCJAG00000021660	-	100	95.957	ENSRROG00000029638	YBX3	100	95.957	Rhinopithecus_roxellana
ENSCJAG00000021660	-	93	87.755	ENSSBOG00000030573	YBX3	86	96.907	Saimiri_boliviensis_boliviensis
ENSCJAG00000021660	-	65	98.837	ENSSHAG00000003262	YBX3	98	80.069	Sarcophilus_harrisii
ENSCJAG00000021660	-	100	87.500	ENSSSCG00000000633	YBX3	100	89.501	Sus_scrofa
ENSCJAG00000021660	-	70	98.077	ENSTGUG00000012047	YBX3	74	98.077	Taeniopygia_guttata
ENSCJAG00000021660	-	100	86.757	ENSTBEG00000012570	YBX3	81	94.539	Tupaia_belangeri
ENSCJAG00000021660	-	71	84.962	ENSTTRG00000008045	YBX3	100	84.962	Tursiops_truncatus
ENSCJAG00000021660	-	75	88.129	ENSUAMG00000016662	YBX3	100	88.489	Ursus_americanus
ENSCJAG00000021660	-	77	91.579	ENSUMAG00000016118	YBX3	94	91.638	Ursus_maritimus
ENSCJAG00000021660	-	58	100.000	ENSVPAG00000000876	YBX3	100	72.535	Vicugna_pacos
ENSCJAG00000021660	-	75	88.489	ENSVVUG00000004956	YBX3	100	89.209	Vulpes_vulpes
ENSCJAG00000021660	-	73	72.523	ENSXETG00000016239	ybx3	90	68.584	Xenopus_tropicalis